RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YTM1Q12024 460 aaPredicted RBP4.36□□□□□ -1.71
YPT52YKR014C SPO11P23179 398 aa4.35□□□□□ -1.71
YPT52YKR014C KCC4P25389 1037 aa4.35□□□□□ -1.71
YPT52YKR014C ILV6P25605 309 aaKnown RBP4.35□□□□□ -1.71
YPT52YKR014C FEN2P25621 512 aaKnown RBP4.35□□□□□ -1.71
YPT52YKR014C FUB1P25659 250 aa4.35□□□□□ -1.71
YPT52YKR014C YKU70P32807 602 aa4.35□□□□□ -1.71
YPT52YKR014C PPZ2P33329 710 aa4.35□□□□□ -1.71
YPT52YKR014C GMH1P36125 273 aa4.35□□□□□ -1.71
YPT52YKR014C YIL077CP40508 320 aa4.35□□□□□ -1.71
YPT52YKR014C PXA1P41909 870 aa4.35□□□□□ -1.71
YPT52YKR014C BIT61P47041 543 aa4.35□□□□□ -1.71
YPT52YKR014C YGR151CP53287 111 aa4.35□□□□□ -1.71
YPT52YKR014C APM1Q00776 475 aaPredicted RBP4.35□□□□□ -1.71
YPT52YKR014C PPN1Q04119 674 aa4.35□□□□□ -1.71
YPT52YKR014C VPS36Q06696 566 aa4.35□□□□□ -1.71
YPT52YKR014C YDL086WQ07505 273 aa4.35□□□□□ -1.71
YPT52YKR014C FAP7Q12055 197 aaPredicted RBP4.35□□□□□ -1.71
YPT52YKR014C DID4P36108 232 aa4.34□□□□□ -1.71
YPT52YKR014C APL3P38065 1025 aa4.34□□□□□ -1.71
YPT52YKR014C BRN1P38170 754 aa4.34□□□□□ -1.71
YPT52YKR014C COS111P38308 924 aa4.34□□□□□ -1.71
YPT52YKR014C CCT5P40413 562 aaKnown RBP4.34□□□□□ -1.71
YPT52YKR014C YGR237CP50089 785 aa4.34□□□□□ -1.71
YPT52YKR014C YGL081WP53156 320 aa4.34□□□□□ -1.71
YPT52YKR014C SEC65P29478 273 aa4.33□□□□□ -1.72
YPT52YKR014C CUE2P36075 443 aaKnown RBP4.33□□□□□ -1.72
YPT52YKR014C CTP1P38152 299 aa4.33□□□□□ -1.72
YPT52YKR014C DUN1P39009 513 aa4.33□□□□□ -1.72
YPT52YKR014C CCT7P42943 550 aaKnown RBP4.33□□□□□ -1.72
YPT52YKR014C MNN11P46985 422 aaKnown RBP4.33□□□□□ -1.72
YPT52YKR014C MPS3P47069 682 aa4.33□□□□□ -1.72
YPT52YKR014C SPC98P53540 846 aa4.33□□□□□ -1.72
YPT52YKR014C DOS2P54858 310 aa4.33□□□□□ -1.72
YPT52YKR014C PTA1Q01329 785 aaPredicted RBP4.33□□□□□ -1.72
YPT52YKR014C YHM2Q04013 314 aa4.33□□□□□ -1.72
YPT52YKR014C RGC1Q06108 1083 aaKnown RBP4.33□□□□□ -1.72
YPT52YKR014C YFT2Q06676 274 aa4.33□□□□□ -1.72
YPT52YKR014C SWI6P09959 803 aa4.32□□□□□ -1.72
YPT52YKR014C SEC6P32844 805 aa4.32□□□□□ -1.72
YPT52YKR014C KHA1P40309 873 aa4.32□□□□□ -1.72
YPT52YKR014C RFX1P48743 811 aa4.32□□□□□ -1.72
YPT52YKR014C NOP15P53927 220 aaPredicted RBP4.32□□□□□ -1.72
YPT52YKR014C YSH1Q06224 779 aaPredicted RBP4.32□□□□□ -1.72
YPT52YKR014C RPS17AP02407 136 aaKnown RBP4.31□□□□□ -1.72
YPT52YKR014C TUB1P09733 447 aaKnown RBP4.31□□□□□ -1.72
YPT52YKR014C RPS17BP14127 136 aaKnown RBP4.31□□□□□ -1.72
YPT52YKR014C SET3P36124 751 aa4.31□□□□□ -1.72
YPT52YKR014C KSP1P38691 1029 aaKnown RBP4.31□□□□□ -1.72
YPT52YKR014C YEL020CP39994 560 aa4.31□□□□□ -1.72
YPT52YKR014C ATF1P40353 525 aa4.31□□□□□ -1.72
YPT52YKR014C ECM9Q02202 377 aa4.31□□□□□ -1.72
YPT52YKR014C BMS1Q08965 1183 aaKnown RBP4.31□□□□□ -1.72
YPT52YKR014C SUT2Q12286 268 aa4.31□□□□□ -1.72
YPT52YKR014C YPT7P32939 208 aa4.3□□□□□ -1.72
YPT52YKR014C UBS1P38290 277 aa4.3□□□□□ -1.72
YPT52YKR014C OAF1P39720 1047 aaPredicted RBP4.3□□□□□ -1.72
YPT52YKR014C SPO1P53541 631 aa4.3□□□□□ -1.72
YPT52YKR014C YPS7Q06325 596 aa4.3□□□□□ -1.72
YPT52YKR014C YPT53P36019 220 aa4.29□□□□□ -1.72
YPT52YKR014C MUP3P38734 546 aa4.29□□□□□ -1.72
YPT52YKR014C YHR097CP38809 366 aaKnown RBP4.29□□□□□ -1.72
YPT52YKR014C RIX1P38883 763 aaPredicted RBP4.29□□□□□ -1.72
YPT52YKR014C GPP1P41277 250 aaKnown RBP4.29□□□□□ -1.72
YPT52YKR014C BUD8P41698 603 aa4.29□□□□□ -1.72
YPT52YKR014C THI6P41835 540 aa4.29□□□□□ -1.72
YPT52YKR014C ENP2P48234 707 aaKnown RBP4.29□□□□□ -1.72
YPT52YKR014C TAF4P50105 388 aa4.29□□□□□ -1.72
YPT52YKR014C NMA2P53204 395 aa4.29□□□□□ -1.72
YPT52YKR014C DIP5P53388 608 aa4.29□□□□□ -1.72
YPT52YKR014C YML122CQ03207 126 aa4.29□□□□□ -1.72
YPT52YKR014C NSE5Q03718 556 aa4.29□□□□□ -1.72
YPT52YKR014C SLK19Q08581 821 aaKnown RBP4.29□□□□□ -1.72
YPT52YKR014C HFI1Q12060 488 aa4.29□□□□□ -1.72
YPT52YKR014C NDJ1Q12366 352 aa4.29□□□□□ -1.72
YPT52YKR014C RPS21BQ3E754 87 aaKnown RBP4.29□□□□□ -1.72
YPT52YKR014C RPA135P22138 1203 aaKnown RBP4.28□□□□□ -1.72
YPT52YKR014C ADY2P25613 283 aa4.28□□□□□ -1.72
YPT52YKR014C OAF3P36023 863 aa4.28□□□□□ -1.72
YPT52YKR014C HXT6P39003 570 aaKnown RBP4.28□□□□□ -1.72
YPT52YKR014C HXT7P39004 570 aa4.28□□□□□ -1.72
YPT52YKR014C DAK1P54838 584 aaKnown RBP4.28□□□□□ -1.72
YPT52YKR014C LGE1Q02796 332 aaKnown RBP4.28□□□□□ -1.72
YPT52YKR014C NGL2Q03264 515 aaKnown RBP4.28□□□□□ -1.72
YPT52YKR014C RCR2Q03446 210 aaKnown RBP4.28□□□□□ -1.72
YPT52YKR014C ARO10Q06408 635 aa4.28□□□□□ -1.72
YPT52YKR014C STP4Q07351 490 aa4.28□□□□□ -1.72
YPT52YKR014C APM4Q99186 491 aa4.28□□□□□ -1.72
YPT52YKR014C LAM4P38800 1345 aa4.27□□□□□ -1.73
YPT52YKR014C IME1P21190 360 aa4.27□□□□□ -1.73
YPT52YKR014C PEX2P32800 271 aa4.27□□□□□ -1.73
YPT52YKR014C EMP70P32802 667 aa4.27□□□□□ -1.73
YPT52YKR014C ATG36P46983 293 aa4.27□□□□□ -1.73
YPT52YKR014C GPG1P53130 126 aa4.27□□□□□ -1.73
YPT52YKR014C CEF1Q03654 590 aaPredicted RBP4.27□□□□□ -1.73
YPT52YKR014C UFO1Q04511 668 aa4.27□□□□□ -1.73
YPT52YKR014C RKI1Q12189 258 aa4.27□□□□□ -1.73
YPT52YKR014C MDM20Q12387 796 aaKnown RBP4.27□□□□□ -1.73
YPT52YKR014C GLN4P13188 809 aaKnown RBP4.26□□□□□ -1.73
YPT52YKR014C DGR2P32330 852 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms