RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeast

Gene SRP21, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP21	YKL122C	NUP60	P39705	539 aa		4.04	□□□□□ -1.76
SRP21	YKL122C	YJR096W	P47137	282 aa		4.04	□□□□□ -1.76
SRP21	YKL122C	COX18	P53239	316 aa		4.04	□□□□□ -1.76
SRP21	YKL122C	THI73	Q07904	523 aa		4.04	□□□□□ -1.76
SRP21	YKL122C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SRP21	YKL122C	NUG1	P40010	520 aa	Known RBP	4.03	□□□□□ -1.76
SRP21	YKL122C	YNL195C	P40168	261 aa		4.03	□□□□□ -1.76
SRP21	YKL122C	FHN1	P53279	174 aa		4.03	□□□□□ -1.76
SRP21	YKL122C	ECM3	Q99252	613 aa		4.03	□□□□□ -1.76
SRP21	YKL122C	NUP145	P49687	1317 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	PRP19	P32523	503 aa	Known RBP	4.02	□□□□□ -1.77
SRP21	YKL122C	AKL1	P38080	1108 aa	Known RBP	4.02	□□□□□ -1.77
SRP21	YKL122C	TDA3	P38758	523 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	YHR202W	P38887	602 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	CKB2	P38930	258 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	MEP2	P41948	499 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	RET2	P43621	546 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	NOP9	P47077	666 aa	Known RBP	4.02	□□□□□ -1.77
SRP21	YKL122C	DOS2	P54858	310 aa		4.02	□□□□□ -1.77
SRP21	YKL122C	GPD1	Q00055	391 aa	Known RBP	4.02	□□□□□ -1.77
SRP21	YKL122C	NUP1	P20676	1076 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	PHO11	P35842	467 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	TYS1	P36421	394 aa	Known RBP	4.01	□□□□□ -1.77
SRP21	YKL122C	MAL31	P38156	614 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	BRN1	P38170	754 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	PHO12	P38693	467 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	CRP1	P38845	465 aa	Known RBP	4.01	□□□□□ -1.77
SRP21	YKL122C	YGR153W	P48238	217 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	YNR029C	P53729	429 aa	Known RBP	4.01	□□□□□ -1.77
SRP21	YKL122C	UME1	Q03010	460 aa		4.01	□□□□□ -1.77
SRP21	YKL122C	MTQ2	Q03920	221 aa	Predicted RBP	4.01	□□□□□ -1.77
SRP21	YKL122C	ISA1	Q07821	250 aa	Predicted RBP	4.01	□□□□□ -1.77
SRP21	YKL122C	PEX1	P24004	1043 aa		4	□□□□□ -1.77
SRP21	YKL122C	IMG2	P25642	146 aa	Predicted RBP	4	□□□□□ -1.77
SRP21	YKL122C	YKR075C	P36155	307 aa		4	□□□□□ -1.77
SRP21	YKL122C	BEM4	P39011	633 aa		4	□□□□□ -1.77
SRP21	YKL122C	RSC8	P43609	557 aa	Known RBP	4	□□□□□ -1.77
SRP21	YKL122C	PMT3	P47190	753 aa		4	□□□□□ -1.77
SRP21	YKL122C	YPL068C	Q02749	293 aa		4	□□□□□ -1.77
SRP21	YKL122C	THI22	Q06490	572 aa		4	□□□□□ -1.77
SRP21	YKL122C	STE4	P18851	423 aa		3.99	□□□□□ -1.77
SRP21	YKL122C	GPG1	P53130	126 aa		3.99	□□□□□ -1.77
SRP21	YKL122C	FMP30	Q02883	468 aa		3.99	□□□□□ -1.77
SRP21	YKL122C	VPS36	Q06696	566 aa		3.99	□□□□□ -1.77
SRP21	YKL122C	AIM44	Q99299	758 aa		3.99	□□□□□ -1.77
SRP21	YKL122C	ERG20	P08524	352 aa	Known RBP	3.98	□□□□□ -1.77
SRP21	YKL122C	RPA135	P22138	1203 aa	Known RBP	3.98	□□□□□ -1.77
SRP21	YKL122C	APN1	P22936	367 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	FUB1	P25659	250 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	YKU70	P32807	602 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	BFA1	P47113	574 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	YLR407W	Q06070	228 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	VHS3	Q08438	674 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	DIA2	Q08496	732 aa	Predicted RBP	3.98	□□□□□ -1.77
SRP21	YKL122C	MLH3	Q12083	715 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	ZRT2	Q12436	422 aa		3.98	□□□□□ -1.77
SRP21	YKL122C	THR1	P17423	357 aa	Known RBP	3.97	□□□□□ -1.77
SRP21	YKL122C	PET127	P32606	800 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	BCS1	P32839	456 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	GMH1	P36125	273 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	BIT2	P38346	545 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	CCT5	P40413	562 aa	Known RBP	3.97	□□□□□ -1.77
SRP21	YKL122C	GZF3	P42944	551 aa	Known RBP	3.97	□□□□□ -1.77
SRP21	YKL122C	YGR237C	P50089	785 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	ECM9	Q02202	377 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	RCR2	Q03446	210 aa	Known RBP	3.97	□□□□□ -1.77
SRP21	YKL122C	YMR210W	Q03649	449 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	USV1	Q12132	391 aa		3.97	□□□□□ -1.77
SRP21	YKL122C	CLF1	Q12309	687 aa	Predicted RBP	3.97	□□□□□ -1.77
SRP21	YKL122C	RPS21B	Q3E754	87 aa	Known RBP	3.97	□□□□□ -1.77
SRP21	YKL122C	SWI6	P09959	803 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	FRS1	P15624	595 aa	Known RBP	3.96	□□□□□ -1.78
SRP21	YKL122C	KCC4	P25389	1037 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	FEN2	P25621	512 aa	Known RBP	3.96	□□□□□ -1.78
SRP21	YKL122C	SEC6	P32844	805 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	OAF1	P39720	1047 aa	Predicted RBP	3.96	□□□□□ -1.78
SRP21	YKL122C	PIG2	P40187	538 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	YPS7	Q06325	596 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	GEP3	Q08622	556 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	YTM1	Q12024	460 aa	Predicted RBP	3.96	□□□□□ -1.78
SRP21	YKL122C	FAP7	Q12055	197 aa	Predicted RBP	3.96	□□□□□ -1.78
SRP21	YKL122C	CHS5	Q12114	671 aa	Known RBP	3.96	□□□□□ -1.78
SRP21	YKL122C	POM34	Q12445	299 aa		3.96	□□□□□ -1.78
SRP21	YKL122C	YPT7	P32939	208 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	SET3	P36124	751 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	HXT6	P39003	570 aa	Known RBP	3.95	□□□□□ -1.78
SRP21	YKL122C	HXT7	P39004	570 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	YIL077C	P40508	320 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	GPP1	P41277	250 aa	Known RBP	3.95	□□□□□ -1.78
SRP21	YKL122C	BIT61	P47041	543 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	RFX1	P48743	811 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	NOP15	P53927	220 aa	Predicted RBP	3.95	□□□□□ -1.78
SRP21	YKL122C	HFD1	Q04458	532 aa		3.95	□□□□□ -1.78
SRP21	YKL122C	VBA4	Q04602	768 aa	Known RBP	3.95	□□□□□ -1.78
SRP21	YKL122C	RPS17A	P02407	136 aa	Known RBP	3.94	□□□□□ -1.78
SRP21	YKL122C	RPS9B	P05755	195 aa	Known RBP	3.94	□□□□□ -1.78
SRP21	YKL122C	ADE5,7	P07244	802 aa	Known RBP	3.94	□□□□□ -1.78
SRP21	YKL122C	RPS17B	P14127	136 aa	Known RBP	3.94	□□□□□ -1.78
SRP21	YKL122C	IME1	P21190	360 aa		3.94	□□□□□ -1.78
SRP21	YKL122C	PRP28	P23394	588 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms