RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W MEF2P39677 819 aa6.53□□□□□ -1.36
PRP40YKL012W BUD8P41698 603 aa6.53□□□□□ -1.36
PRP40YKL012W TAF4P50105 388 aa6.53□□□□□ -1.36
PRP40YKL012W SLU7Q02775 382 aaKnown RBP6.53□□□□□ -1.36
PRP40YKL012W NOP12Q08208 459 aaKnown RBP6.53□□□□□ -1.36
PRP40YKL012W RRI2Q12348 645 aa6.53□□□□□ -1.36
PRP40YKL012W VPS5Q92331 675 aa6.53□□□□□ -1.36
PRP40YKL012W PSY4P38193 441 aa6.52□□□□□ -1.37
PRP40YKL012W SPC72P39723 622 aa6.52□□□□□ -1.37
PRP40YKL012W PXA1P41909 870 aa6.52□□□□□ -1.37
PRP40YKL012W MNT2P53059 558 aa6.52□□□□□ -1.37
PRP40YKL012W PEX19Q07418 342 aa6.52□□□□□ -1.37
PRP40YKL012W SGO1Q08490 590 aa6.52□□□□□ -1.37
PRP40YKL012W DIN7Q12086 430 aa6.52□□□□□ -1.37
PRP40YKL012W NPC2Q12408 173 aa6.52□□□□□ -1.37
PRP40YKL012W GFA1P14742 717 aaKnown RBP6.52□□□□□ -1.37
PRP40YKL012W CBP3P21560 335 aa6.52□□□□□ -1.37
PRP40YKL012W EIS1Q05050 843 aaKnown RBP6.52□□□□□ -1.37
PRP40YKL012W OPY2Q06810 360 aa6.52□□□□□ -1.37
PRP40YKL012W RXT3Q07458 294 aa6.52□□□□□ -1.37
PRP40YKL012W NEW1Q08972 1196 aaKnown RBP6.52□□□□□ -1.37
PRP40YKL012W SSM4P40318 1319 aa6.51□□□□□ -1.37
PRP40YKL012W MCM10P32354 571 aa6.51□□□□□ -1.37
PRP40YKL012W YHR033WP38690 423 aa6.51□□□□□ -1.37
PRP40YKL012W RPP1P38786 293 aa6.51□□□□□ -1.37
PRP40YKL012W NOC2P39744 710 aaKnown RBP6.51□□□□□ -1.37
PRP40YKL012W YNL195CP40168 261 aa6.51□□□□□ -1.37
PRP40YKL012W IMA5P40884 581 aa6.51□□□□□ -1.37
PRP40YKL012W UBA2P52488 636 aa6.51□□□□□ -1.37
PRP40YKL012W PPN1Q04119 674 aa6.51□□□□□ -1.37
PRP40YKL012W VBA4Q04602 768 aaKnown RBP6.51□□□□□ -1.37
PRP40YKL012W VPS36Q06696 566 aa6.51□□□□□ -1.37
PRP40YKL012W MCH5Q08777 521 aa6.51□□□□□ -1.37
PRP40YKL012W PUS1Q12211 544 aaKnown RBP6.51□□□□□ -1.37
PRP40YKL012W GFD2P25370 566 aaKnown RBP6.5□□□□□ -1.37
PRP40YKL012W PEF1P53238 335 aa6.5□□□□□ -1.37
PRP40YKL012W YNR071CP53757 342 aa6.5□□□□□ -1.37
PRP40YKL012W TRM11Q12463 433 aa6.5□□□□□ -1.37
PRP40YKL012W YOL087CQ99247 1116 aa6.5□□□□□ -1.37
PRP40YKL012W ERG20P08524 352 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W PPE1P38796 400 aa6.49□□□□□ -1.37
PRP40YKL012W BIT61P47041 543 aa6.49□□□□□ -1.37
PRP40YKL012W GCN5Q03330 439 aa6.49□□□□□ -1.37
PRP40YKL012W TRI1Q05024 226 aa6.49□□□□□ -1.37
PRP40YKL012W DBP10Q12389 995 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W HSC82P15108 705 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W RNR1P21524 888 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W CWH43P25618 953 aa6.49□□□□□ -1.37
PRP40YKL012W PRE4P30657 266 aa6.49□□□□□ -1.37
PRP40YKL012W PUB1P32588 453 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
PRP40YKL012W YLF2P38746 405 aa6.49□□□□□ -1.37
PRP40YKL012W STT3P39007 718 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W CTH1P47976 325 aa6.49□□□□□ -1.37
PRP40YKL012W COX18P53239 316 aa6.49□□□□□ -1.37
PRP40YKL012W CPR6P53691 371 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W ARC35P53731 342 aaKnown RBP6.49□□□□□ -1.37
PRP40YKL012W NRG1Q03125 231 aa6.49□□□□□ -1.37
PRP40YKL012W YAP6Q03935 383 aa6.49□□□□□ -1.37
PRP40YKL012W ENT2Q05785 613 aa6.49□□□□□ -1.37
PRP40YKL012W BRE4Q07660 1125 aa6.49□□□□□ -1.37
PRP40YKL012W PRP22P24384 1145 aaKnown RBP6.48□□□□□ -1.37
PRP40YKL012W MTC7P32633 139 aa6.48□□□□□ -1.37
PRP40YKL012W XRS2P33301 854 aa6.48□□□□□ -1.37
PRP40YKL012W CTF13P35203 478 aa6.48□□□□□ -1.37
PRP40YKL012W MNT3P40549 630 aa6.48□□□□□ -1.37
PRP40YKL012W NOP9P47077 666 aaKnown RBP6.48□□□□□ -1.37
PRP40YKL012W MRPL22P53881 309 aa6.48□□□□□ -1.37
PRP40YKL012W ACK1Q07622 623 aaPredicted RBP6.48□□□□□ -1.37
PRP40YKL012W PHO5P00635 467 aa6.47□□□□□ -1.37
PRP40YKL012W MCM3P24279 971 aaKnown RBP6.47□□□□□ -1.37
PRP40YKL012W RER1P25560 188 aa6.47□□□□□ -1.37
PRP40YKL012W CCT3P39077 534 aaKnown RBP6.47□□□□□ -1.37
PRP40YKL012W RAD26P40352 1085 aa6.47□□□□□ -1.37
PRP40YKL012W SMK1P41808 388 aa6.47□□□□□ -1.37
PRP40YKL012W CCT8P47079 568 aaKnown RBP6.47□□□□□ -1.37
PRP40YKL012W TEX1P53851 422 aaKnown RBP6.47□□□□□ -1.37
PRP40YKL012W YDR132CQ03900 495 aa6.47□□□□□ -1.37
PRP40YKL012W TGL5Q12043 749 aa6.47□□□□□ -1.37
PRP40YKL012W MTF2P10849 440 aa6.46□□□□□ -1.37
PRP40YKL012W ERG6P25087 383 aaKnown RBP6.46□□□□□ -1.37
PRP40YKL012W YCL049CP25577 312 aa6.46□□□□□ -1.37
PRP40YKL012W CHS3P29465 1165 aa6.46□□□□□ -1.37
PRP40YKL012W RRN3P36070 627 aa6.46□□□□□ -1.37
PRP40YKL012W PUG1P40100 303 aa6.46□□□□□ -1.37
PRP40YKL012W PRM2P40534 656 aa6.46□□□□□ -1.37
PRP40YKL012W MRPS35P53292 345 aa6.46□□□□□ -1.37
PRP40YKL012W SQS1P53866 767 aaKnown RBP6.46□□□□□ -1.37
PRP40YKL012W MRPL13Q02204 264 aa6.46□□□□□ -1.37
PRP40YKL012W GAD1Q04792 585 aa6.46□□□□□ -1.37
PRP40YKL012W HRP1Q99383 534 aaKnown RBP6.46□□□□□ -1.37
PRP40YKL012W NCP1P16603 691 aaKnown RBP6.46□□□□□ -1.38
PRP40YKL012W CDC20P26309 610 aa6.46□□□□□ -1.38
PRP40YKL012W RMA1P36001 430 aaKnown RBP6.46□□□□□ -1.38
PRP40YKL012W YMR018WQ04364 514 aa6.46□□□□□ -1.38
PRP40YKL012W CLF1Q12309 687 aaPredicted RBP6.46□□□□□ -1.38
PRP40YKL012W POM34Q12445 299 aa6.46□□□□□ -1.38
PRP40YKL012W ATG11Q12527 1178 aa6.46□□□□□ -1.38
PRP40YKL012W ECM3Q99252 613 aa6.46□□□□□ -1.38
PRP40YKL012W SIR1P21691 654 aa6.45□□□□□ -1.38
PRP40YKL012W KIN82P25341 720 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 90 ms