RNA–Protein interactions for RNA: YJR041C

URB2, Protein required for normal metabolism of the rRNA primary transcript, yeast

Gene URB2, Length 3,525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URB2	YJR041C	ACS1	Q01574	713 aa		3.36	□□□□□ -1.87
URB2	YJR041C	MUS81	Q04149	632 aa	Predicted RBP	3.36	□□□□□ -1.87
URB2	YJR041C	GPB1	Q08886	897 aa		3.36	□□□□□ -1.87
URB2	YJR041C	YDL176W	Q12027	708 aa		3.36	□□□□□ -1.87
URB2	YJR041C	NGG1	P32494	702 aa		3.36	□□□□□ -1.87
URB2	YJR041C	PAH1	P32567	862 aa		3.36	□□□□□ -1.87
URB2	YJR041C	RPT3	P33298	428 aa	Known RBP	3.36	□□□□□ -1.87
URB2	YJR041C	TFC3	P34111	1160 aa		3.36	□□□□□ -1.87
URB2	YJR041C	MAD2	P40958	196 aa		3.36	□□□□□ -1.87
URB2	YJR041C	PRP31	P49704	494 aa	Predicted RBP	3.36	□□□□□ -1.87
URB2	YJR041C	YBP2	P53169	641 aa		3.36	□□□□□ -1.87
URB2	YJR041C	RSC1	P53236	928 aa		3.36	□□□□□ -1.87
URB2	YJR041C	THI72	Q08579	599 aa		3.36	□□□□□ -1.87
URB2	YJR041C	ECM3	Q99252	613 aa		3.36	□□□□□ -1.87
URB2	YJR041C	CYC1	P00044	109 aa	Predicted RBP	3.35	□□□□□ -1.87
URB2	YJR041C	GAL10	P04397	699 aa		3.35	□□□□□ -1.87
URB2	YJR041C	ADE3	P07245	946 aa	Known RBP	3.35	□□□□□ -1.87
URB2	YJR041C	MCM3	P24279	971 aa	Known RBP	3.35	□□□□□ -1.87
URB2	YJR041C	UME6	P39001	836 aa		3.35	□□□□□ -1.87
URB2	YJR041C	KAP123	P40069	1113 aa	Known RBP	3.35	□□□□□ -1.87
URB2	YJR041C	SGD1	Q06132	899 aa		3.35	□□□□□ -1.87
URB2	YJR041C	DIN7	Q12086	430 aa		3.35	□□□□□ -1.87
URB2	YJR041C	ATG11	Q12527	1178 aa		3.35	□□□□□ -1.87
URB2	YJR041C	FRS1	P15624	595 aa	Known RBP	3.35	□□□□□ -1.87
URB2	YJR041C	RAD16	P31244	790 aa		3.35	□□□□□ -1.87
URB2	YJR041C	YNR071C	P53757	342 aa		3.35	□□□□□ -1.87
URB2	YJR041C	ROT1	Q03691	256 aa		3.35	□□□□□ -1.87
URB2	YJR041C	RTP1	Q12751	981 aa		3.35	□□□□□ -1.87
URB2	YJR041C	RPS9B	P05755	195 aa	Known RBP	3.35	□□□□□ -1.87
URB2	YJR041C	GCD1	P09032	578 aa	Predicted RBP	3.35	□□□□□ -1.87
URB2	YJR041C	HOM3	P10869	527 aa		3.35	□□□□□ -1.87
URB2	YJR041C	MF(ALPHA)2	P32435	120 aa		3.35	□□□□□ -1.87
URB2	YJR041C	SDP1	P40479	209 aa		3.35	□□□□□ -1.87
URB2	YJR041C	TAF4	P50105	388 aa		3.35	□□□□□ -1.87
URB2	YJR041C	SAP4	P53036	818 aa		3.35	□□□□□ -1.87
URB2	YJR041C	URA3	P03962	267 aa		3.34	□□□□□ -1.87
URB2	YJR041C	PRP4	P20053	465 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	IME1	P21190	360 aa		3.34	□□□□□ -1.87
URB2	YJR041C	COQ2	P32378	372 aa		3.34	□□□□□ -1.87
URB2	YJR041C	MAC1	P35192	417 aa		3.34	□□□□□ -1.87
URB2	YJR041C	CTF8	P38877	133 aa		3.34	□□□□□ -1.87
URB2	YJR041C	CTH1	P47976	325 aa		3.34	□□□□□ -1.87
URB2	YJR041C	FOL2	P51601	243 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	RBG2	P53295	368 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	SNO4	Q04902	237 aa		3.34	□□□□□ -1.87
URB2	YJR041C	RGA2	Q06407	1009 aa		3.34	□□□□□ -1.87
URB2	YJR041C	HSP33	Q08914	237 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	HSP32	Q08992	237 aa		3.34	□□□□□ -1.87
URB2	YJR041C	GPR1	Q12361	961 aa		3.34	□□□□□ -1.87
URB2	YJR041C	HSH49	Q99181	213 aa	Predicted RBP	3.34	□□□□□ -1.87
URB2	YJR041C	AI1	P03875	834 aa		3.34	□□□□□ -1.87
URB2	YJR041C	MIS1	P09440	975 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	MET8	P15807	274 aa		3.34	□□□□□ -1.87
URB2	YJR041C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
URB2	YJR041C	ADE2	P21264	571 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	UBC1	P21734	215 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	ARG1	P22768	420 aa		3.34	□□□□□ -1.87
URB2	YJR041C	SED4	P25365	1065 aa		3.34	□□□□□ -1.87
URB2	YJR041C	RPS7A	P26786	190 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	ETP1	P38748	585 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	BUD8	P41698	603 aa		3.34	□□□□□ -1.87
URB2	YJR041C	UPF3	P48412	387 aa	Known RBP	3.34	□□□□□ -1.87
URB2	YJR041C	COX17	Q12287	69 aa		3.34	□□□□□ -1.87
URB2	YJR041C	MTF2	P10849	440 aa		3.33	□□□□□ -1.88
URB2	YJR041C	RMA1	P36001	430 aa	Known RBP	3.33	□□□□□ -1.88
URB2	YJR041C	STB5	P38699	743 aa		3.33	□□□□□ -1.88
URB2	YJR041C	MND2	P40577	368 aa		3.33	□□□□□ -1.88
URB2	YJR041C	ARI1	P53111	347 aa	Known RBP	3.33	□□□□□ -1.88
URB2	YJR041C	TPO1	Q07824	586 aa		3.33	□□□□□ -1.88
URB2	YJR041C	SDH5	Q08230	162 aa		3.33	□□□□□ -1.88
URB2	YJR041C	RRG1	Q12167	365 aa	Predicted RBP	3.33	□□□□□ -1.88
URB2	YJR041C	HOS1	Q12214	470 aa		3.33	□□□□□ -1.88
URB2	YJR041C	PCK1	P10963	549 aa		3.33	□□□□□ -1.88
URB2	YJR041C	BET2	P20133	325 aa		3.33	□□□□□ -1.88
URB2	YJR041C	ERG6	P25087	383 aa	Known RBP	3.33	□□□□□ -1.88
URB2	YJR041C	SRB7	P47822	140 aa		3.33	□□□□□ -1.88
URB2	YJR041C	SPC19	Q03954	165 aa		3.33	□□□□□ -1.88
URB2	YJR041C	ARA2	Q04212	335 aa		3.33	□□□□□ -1.88
URB2	YJR041C	YKU80	Q04437	629 aa		3.33	□□□□□ -1.88
URB2	YJR041C	VIP1	Q06685	1146 aa	Known RBP	3.33	□□□□□ -1.88
URB2	YJR041C	FUR1	P18562	216 aa	Known RBP	3.33	□□□□□ -1.88
URB2	YJR041C	CNS1	P33313	385 aa		3.33	□□□□□ -1.88
URB2	YJR041C	TAF5	P38129	798 aa		3.33	□□□□□ -1.88
URB2	YJR041C	MRPL19	P53875	158 aa		3.33	□□□□□ -1.88
URB2	YJR041C	TDA9	Q04545	1251 aa		3.33	□□□□□ -1.88
URB2	YJR041C	CSR1	Q06705	408 aa	Known RBP	3.33	□□□□□ -1.88
URB2	YJR041C	MCA1	Q08601	432 aa		3.33	□□□□□ -1.88
URB2	YJR041C	CDC16	P09798	840 aa		3.32	□□□□□ -1.88
URB2	YJR041C	OPI1	P21957	404 aa		3.32	□□□□□ -1.88
URB2	YJR041C	PGS1	P25578	521 aa		3.32	□□□□□ -1.88
URB2	YJR041C	XRS2	P33301	854 aa		3.32	□□□□□ -1.88
URB2	YJR041C	TEF4	P36008	412 aa	Known RBP	3.32	□□□□□ -1.88
URB2	YJR041C	YER010C	P40011	234 aa		3.32	□□□□□ -1.88
URB2	YJR041C	PXA1	P41909	870 aa		3.32	□□□□□ -1.88
URB2	YJR041C	YAP1802	P53309	568 aa		3.32	□□□□□ -1.88
URB2	YJR041C	PKH1	Q03407	766 aa		3.32	□□□□□ -1.88
URB2	YJR041C	SIZ1	Q04195	904 aa		3.32	□□□□□ -1.88
URB2	YJR041C	ICL2	Q12031	575 aa		3.32	□□□□□ -1.88
URB2	YJR041C	SWM1	Q12379	170 aa		3.32	□□□□□ -1.88
URB2	YJR041C	VPS5	Q92331	675 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms