RNA–Protein interactions for RNA: YIR002C

MPH1, Transcript of 3'-5' DNA helicase involved in error-free bypass of DNA lesions, yeast

Gene MPH1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MPH1	YIR002C	ARP4	P80428	489 aa		2.75	□□□□□ -1.97
MPH1	YIR002C	REC102	Q02721	264 aa		2.75	□□□□□ -1.97
MPH1	YIR002C	KCS1	Q12494	1050 aa		2.75	□□□□□ -1.97
MPH1	YIR002C	MPD2	Q99316	277 aa		2.75	□□□□□ -1.97
MPH1	YIR002C	RPS21A	P0C0V8	87 aa	Known RBP	2.74	□□□□□ -1.97
MPH1	YIR002C	HIR1	P32479	840 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	YKU70	P32807	602 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	NIC96	P34077	839 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	DUN1	P39009	513 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	BRE5	P53741	515 aa	Known RBP	2.74	□□□□□ -1.97
MPH1	YIR002C	NRG1	Q03125	231 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	ISA1	Q07821	250 aa	Predicted RBP	2.74	□□□□□ -1.97
MPH1	YIR002C	PEX15	Q08215	383 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	APM4	Q99186	491 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	YLR358C	O13565	187 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	TOP1	P04786	769 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	TOD6	P34219	525 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	AKL1	P38080	1108 aa	Known RBP	2.74	□□□□□ -1.97
MPH1	YIR002C	COX18	P53239	316 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	VMS1	Q04311	632 aa	Known RBP	2.74	□□□□□ -1.97
MPH1	YIR002C	GAD1	Q04792	585 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	ASM4	Q05166	528 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	YLR407W	Q06070	228 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	SGO1	Q08490	590 aa		2.74	□□□□□ -1.97
MPH1	YIR002C	TUB3	P09734	445 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	SST2	P11972	698 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	YKL133C	P36066	463 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	CWC22	P53333	577 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	HOL1	P53389	586 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	MCM21	Q06675	368 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	VHS3	Q08438	674 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	YOR378W	Q08902	515 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	NUP188	P52593	1655 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	SWI6	P09959	803 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	KAR4	P25583	335 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	DGR2	P32330	852 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	CTF13	P35203	478 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	APL2	P36000	726 aa	Predicted RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	RIM4	P38741	713 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	BEM4	P39011	633 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	ECM1	P39715	212 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	ENP2	P48234	707 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	EXG2	P52911	562 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	NOP15	P53927	220 aa	Predicted RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	YNL034W	P53963	612 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	YNL018C	P53976	612 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	ARG5,6	Q01217	863 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	PYC1	P11154	1178 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	ADE2	P21264	571 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	SEC15	P22224	910 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	HEM12	P32347	362 aa	Predicted RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	TRZ1	P36159	838 aa	Predicted RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	SIC1	P38634	284 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	LEE1	Q02799	301 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	CTK1	Q03957	528 aa	Known RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	ENB1	Q08299	606 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	DIA2	Q08496	732 aa	Predicted RBP	2.73	□□□□□ -1.97
MPH1	YIR002C	GPR1	Q12361	961 aa		2.73	□□□□□ -1.97
MPH1	YIR002C	GLN4	P13188	809 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	PFK1	P16861	987 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	PRP6	P19735	899 aa	Predicted RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	TSA1	P34760	196 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	MCM6	P53091	1017 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	TGL2	P54857	326 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	TMA10	Q06177	86 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	CDA2	Q06703	312 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
MPH1	YIR002C	RPS17A	P02407	136 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	ERG20	P08524	352 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	RPS17B	P14127	136 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	STE11	P23561	717 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	IMG2	P25642	146 aa	Predicted RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	PET127	P32606	800 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	EBP2	P36049	427 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	FAT1	P38225	669 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	AMA1	P50082	593 aa		2.72	□□□□□ -1.97
MPH1	YIR002C	MNN10	P50108	393 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	VBA4	Q04602	768 aa	Known RBP	2.72	□□□□□ -1.97
MPH1	YIR002C	MET3	P08536	511 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	PRP4	P20053	465 aa	Known RBP	2.71	□□□□□ -1.98
MPH1	YIR002C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
MPH1	YIR002C	PRP22	P24384	1145 aa	Known RBP	2.71	□□□□□ -1.98
MPH1	YIR002C	PTP2	P29461	750 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	LST4	P34239	828 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	SRP68	P38687	599 aa	Known RBP	2.71	□□□□□ -1.98
MPH1	YIR002C	VID28	P40547	921 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	FKH2	P41813	862 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	MET14	Q02196	202 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	PPN1	Q04119	674 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	DLT1	Q04216	342 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	ECM38	Q05902	660 aa	Predicted RBP	2.71	□□□□□ -1.98
MPH1	YIR002C	MLP2	P40457	1679 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	SER1	P33330	395 aa	Known RBP	2.71	□□□□□ -1.98
MPH1	YIR002C	YHR112C	P38716	378 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	PXA1	P41909	870 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	AVT1	P47082	602 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	PIP2	P52960	996 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	PAP2	P53632	584 aa	Known RBP	2.71	□□□□□ -1.98
MPH1	YIR002C	ATG11	Q12527	1178 aa		2.71	□□□□□ -1.98
MPH1	YIR002C	SKI3	P17883	1432 aa	Known RBP	2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms