RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W MPS3P47069 682 aa5.42□□□□□ -1.54
SEC28YIL076W YDL086WQ07505 273 aa5.42□□□□□ -1.54
SEC28YIL076W YPT7P32939 208 aa5.41□□□□□ -1.54
SEC28YIL076W KSP1P38691 1029 aaKnown RBP5.41□□□□□ -1.54
SEC28YIL076W TDA3P38758 523 aa5.41□□□□□ -1.54
SEC28YIL076W BIT61P47041 543 aa5.41□□□□□ -1.54
SEC28YIL076W RCR2Q03446 210 aaKnown RBP5.41□□□□□ -1.54
SEC28YIL076W YMR210WQ03649 449 aa5.41□□□□□ -1.54
SEC28YIL076W YLR407WQ06070 228 aa5.41□□□□□ -1.54
SEC28YIL076W ADR1P07248 1323 aa5.41□□□□□ -1.54
SEC28YIL076W RPS9BP05755 195 aaKnown RBP5.4□□□□□ -1.54
SEC28YIL076W SEC15P22224 910 aa5.4□□□□□ -1.54
SEC28YIL076W YKU70P32807 602 aa5.4□□□□□ -1.54
SEC28YIL076W CTP1P38152 299 aa5.4□□□□□ -1.54
SEC28YIL076W MUP3P38734 546 aa5.4□□□□□ -1.54
SEC28YIL076W RET2P43621 546 aa5.4□□□□□ -1.54
SEC28YIL076W BFA1P47113 574 aa5.4□□□□□ -1.54
SEC28YIL076W YJR096WP47137 282 aa5.4□□□□□ -1.54
SEC28YIL076W DNM1P54861 757 aa5.4□□□□□ -1.54
SEC28YIL076W KIN82P25341 720 aa5.39□□□□□ -1.55
SEC28YIL076W KCC4P25389 1037 aa5.39□□□□□ -1.55
SEC28YIL076W COS111P38308 924 aa5.39□□□□□ -1.55
SEC28YIL076W NMD2P38798 1089 aaKnown RBP5.39□□□□□ -1.55
SEC28YIL076W CKB2P38930 258 aa5.39□□□□□ -1.55
SEC28YIL076W NMA2P53204 395 aa5.39□□□□□ -1.55
SEC28YIL076W SPC98P53540 846 aa5.39□□□□□ -1.55
SEC28YIL076W VBA4Q04602 768 aaKnown RBP5.39□□□□□ -1.55
SEC28YIL076W YSH1Q06224 779 aaPredicted RBP5.39□□□□□ -1.55
SEC28YIL076W YFT2Q06676 274 aa5.39□□□□□ -1.55
SEC28YIL076W MSS1P32559 526 aaPredicted RBP5.38□□□□□ -1.55
SEC28YIL076W KHA1P40309 873 aa5.38□□□□□ -1.55
SEC28YIL076W COQ11Q05892 277 aa5.38□□□□□ -1.55
SEC28YIL076W YPS7Q06325 596 aa5.38□□□□□ -1.55
SEC28YIL076W YNL162W-AQ3E7A8 72 aa5.38□□□□□ -1.55
SEC28YIL076W NTH1P32356 751 aa5.37□□□□□ -1.55
SEC28YIL076W PRP19P32523 503 aaKnown RBP5.37□□□□□ -1.55
SEC28YIL076W HLJ1P48353 224 aa5.37□□□□□ -1.55
SEC28YIL076W BMS1Q08965 1183 aaKnown RBP5.37□□□□□ -1.55
SEC28YIL076W LAM4P38800 1345 aa5.37□□□□□ -1.55
SEC28YIL076W SWI6P09959 803 aa5.36□□□□□ -1.55
SEC28YIL076W STE12P13574 688 aa5.36□□□□□ -1.55
SEC28YIL076W IME1P21190 360 aa5.36□□□□□ -1.55
SEC28YIL076W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SEC28YIL076W YMC2P38087 329 aa5.36□□□□□ -1.55
SEC28YIL076W MIT1P40002 666 aa5.36□□□□□ -1.55
SEC28YIL076W YGR153WP48238 217 aa5.36□□□□□ -1.55
SEC28YIL076W MRK1P50873 501 aa5.36□□□□□ -1.55
SEC28YIL076W UTP14Q04500 899 aaKnown RBP5.36□□□□□ -1.55
SEC28YIL076W RKI1Q12189 258 aa5.36□□□□□ -1.55
SEC28YIL076W APL3P38065 1025 aa5.35□□□□□ -1.55
SEC28YIL076W PAC2P39937 518 aa5.35□□□□□ -1.55
SEC28YIL076W DIP5P53388 608 aa5.35□□□□□ -1.55
SEC28YIL076W THI73Q07904 523 aa5.35□□□□□ -1.55
SEC28YIL076W PHO5P00635 467 aa5.34□□□□□ -1.55
SEC28YIL076W TYS1P36421 394 aaKnown RBP5.34□□□□□ -1.55
SEC28YIL076W BUD8P41698 603 aa5.34□□□□□ -1.55
SEC28YIL076W PMT6P42934 759 aa5.34□□□□□ -1.55
SEC28YIL076W THI7Q05998 598 aa5.34□□□□□ -1.55
SEC28YIL076W RPS21BQ3E754 87 aaKnown RBP5.34□□□□□ -1.55
SEC28YIL076W RPS17AP02407 136 aaKnown RBP5.33□□□□□ -1.56
SEC28YIL076W RPS17BP14127 136 aaKnown RBP5.33□□□□□ -1.56
SEC28YIL076W MDM10P18409 493 aa5.33□□□□□ -1.56
SEC28YIL076W PRP22P24384 1145 aaKnown RBP5.33□□□□□ -1.56
SEC28YIL076W ELF1P36053 145 aa5.33□□□□□ -1.56
SEC28YIL076W PXA1P41909 870 aa5.33□□□□□ -1.56
SEC28YIL076W YJR142WP47173 342 aa5.33□□□□□ -1.56
SEC28YIL076W SNF12P53628 566 aa5.33□□□□□ -1.56
SEC28YIL076W NOP15P53927 220 aaPredicted RBP5.33□□□□□ -1.56
SEC28YIL076W MTQ2Q03920 221 aaPredicted RBP5.33□□□□□ -1.56
SEC28YIL076W STP4Q07351 490 aa5.33□□□□□ -1.56
SEC28YIL076W IZH3Q07959 543 aa5.33□□□□□ -1.56
SEC28YIL076W CCT5P40413 562 aaKnown RBP5.32□□□□□ -1.56
SEC28YIL076W ASN1P49089 572 aaKnown RBP5.32□□□□□ -1.56
SEC28YIL076W YDR179W-AQ03983 463 aa5.32□□□□□ -1.56
SEC28YIL076W UFO1Q04511 668 aa5.32□□□□□ -1.56
SEC28YIL076W MRI1Q06489 411 aaKnown RBP5.32□□□□□ -1.56
SEC28YIL076W NUP145P49687 1317 aa5.31□□□□□ -1.56
SEC28YIL076W RPA135P22138 1203 aaKnown RBP5.31□□□□□ -1.56
SEC28YIL076W VPS34P22543 875 aa5.31□□□□□ -1.56
SEC28YIL076W SEC65P29478 273 aa5.31□□□□□ -1.56
SEC28YIL076W PMC1P38929 1173 aaPredicted RBP5.31□□□□□ -1.56
SEC28YIL076W SPO1P53541 631 aa5.31□□□□□ -1.56
SEC28YIL076W ECM9Q02202 377 aa5.31□□□□□ -1.56
SEC28YIL076W MDM20Q12387 796 aaKnown RBP5.31□□□□□ -1.56
SEC28YIL076W HOM2P13663 365 aaKnown RBP5.3□□□□□ -1.56
SEC28YIL076W SAT4P25333 603 aaKnown RBP5.3□□□□□ -1.56
SEC28YIL076W HXT6P39003 570 aaKnown RBP5.3□□□□□ -1.56
SEC28YIL076W HXT7P39004 570 aa5.3□□□□□ -1.56
SEC28YIL076W DUN1P39009 513 aa5.3□□□□□ -1.56
SEC28YIL076W UME1Q03010 460 aa5.3□□□□□ -1.56
SEC28YIL076W PPN1Q04119 674 aa5.3□□□□□ -1.56
SEC28YIL076W OSW1Q08692 278 aa5.3□□□□□ -1.56
SEC28YIL076W ORC2P32833 620 aa5.29□□□□□ -1.56
SEC28YIL076W OAF3P36023 863 aa5.29□□□□□ -1.56
SEC28YIL076W GZF3P42944 551 aaKnown RBP5.29□□□□□ -1.56
SEC28YIL076W IES1P43579 692 aa5.29□□□□□ -1.56
SEC28YIL076W FMP30Q02883 468 aa5.29□□□□□ -1.56
SEC28YIL076W YHM2Q04013 314 aa5.29□□□□□ -1.56
SEC28YIL076W TPK2P06245 380 aa5.28□□□□□ -1.56
SEC28YIL076W GLN4P13188 809 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms