RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W PUT4P15380 627 aa14.58□□□□□ -0.08
RPN10YHR200W EST1P17214 699 aaPredicted RBP14.58□□□□□ -0.08
RPN10YHR200W LRE1P25579 583 aaKnown RBP14.58□□□□□ -0.08
RPN10YHR200W SEC1P30619 724 aaKnown RBP14.58□□□□□ -0.08
RPN10YHR200W SLX1P38324 304 aa14.58□□□□□ -0.08
RPN10YHR200W POL31P46957 487 aa14.58□□□□□ -0.08
RPN10YHR200W SPC98P53540 846 aa14.58□□□□□ -0.08
RPN10YHR200W RPL22BP56628 122 aaKnown RBP14.58□□□□□ -0.08
RPN10YHR200W YMR187CQ03236 431 aa14.58□□□□□ -0.08
RPN10YHR200W GYL1Q04322 720 aa14.58□□□□□ -0.08
RPN10YHR200W UFO1Q04511 668 aa14.58□□□□□ -0.08
RPN10YHR200W MDM38Q08179 573 aa14.58□□□□□ -0.08
RPN10YHR200W PKH2Q12236 1081 aaKnown RBP14.58□□□□□ -0.08
RPN10YHR200W KAR3P17119 729 aa14.57□□□□□ -0.08
RPN10YHR200W AEP2P22136 580 aa14.57□□□□□ -0.08
RPN10YHR200W YBL036CP38197 257 aa14.57□□□□□ -0.08
RPN10YHR200W RGD1P38339 666 aa14.57□□□□□ -0.08
RPN10YHR200W LAA1P39526 2014 aa14.56□□□□□ -0.08
RPN10YHR200W TUB3P09734 445 aaKnown RBP14.56□□□□□ -0.08
RPN10YHR200W SFL1P20134 766 aa14.56□□□□□ -0.08
RPN10YHR200W APN2P38207 520 aa14.56□□□□□ -0.08
RPN10YHR200W SWC5P38326 303 aa14.56□□□□□ -0.08
RPN10YHR200W PCA1P38360 1216 aa14.56□□□□□ -0.08
RPN10YHR200W TIF5P38431 405 aaKnown RBP14.56□□□□□ -0.08
RPN10YHR200W MMS21P38632 267 aa14.56□□□□□ -0.08
RPN10YHR200W END3P39013 349 aa14.56□□□□□ -0.08
RPN10YHR200W XDJ1P39102 459 aa14.56□□□□□ -0.08
RPN10YHR200W RPT2P40327 437 aaKnown RBP14.56□□□□□ -0.08
RPN10YHR200W NOG2P53742 486 aaKnown RBP14.56□□□□□ -0.08
RPN10YHR200W VPS5Q92331 675 aa14.56□□□□□ -0.08
RPN10YHR200W TPK1P06244 397 aa14.55□□□□□ -0.08
RPN10YHR200W VPH1P32563 840 aaKnown RBP14.55□□□□□ -0.08
RPN10YHR200W CCL1P37366 393 aa14.55□□□□□ -0.08
RPN10YHR200W YML6P51998 286 aa14.55□□□□□ -0.08
RPN10YHR200W TDA9Q04545 1251 aa14.55□□□□□ -0.08
RPN10YHR200W CIT2P08679 460 aa14.54□□□□□ -0.08
RPN10YHR200W TRX1P22217 103 aaKnown RBP14.54□□□□□ -0.08
RPN10YHR200W YEL023CP39992 682 aa14.54□□□□□ -0.08
RPN10YHR200W SAP185P40856 1058 aa14.54□□□□□ -0.08
RPN10YHR200W RIM8P53179 542 aa14.54□□□□□ -0.08
RPN10YHR200W UTP6Q02354 440 aaKnown RBP14.54□□□□□ -0.08
RPN10YHR200W YDL073WQ07454 984 aa14.54□□□□□ -0.08
RPN10YHR200W FMP25Q08023 583 aa14.54□□□□□ -0.08
RPN10YHR200W VPS54Q12071 889 aa14.54□□□□□ -0.08
RPN10YHR200W EMP46Q12396 444 aa14.54□□□□□ -0.08
RPN10YHR200W YPK1P12688 680 aaKnown RBP14.53□□□□□ -0.08
RPN10YHR200W SLA2P33338 968 aa14.53□□□□□ -0.08
RPN10YHR200W SRB2P34162 210 aa14.53□□□□□ -0.08
RPN10YHR200W RAD55P38953 406 aa14.53□□□□□ -0.08
RPN10YHR200W LYS9P38999 446 aa14.53□□□□□ -0.08
RPN10YHR200W PFD1P46988 109 aa14.53□□□□□ -0.08
RPN10YHR200W TAF9Q05027 157 aa14.53□□□□□ -0.08
RPN10YHR200W CAP1P28495 268 aaKnown RBP14.52□□□□□ -0.09
RPN10YHR200W HMT1P38074 348 aa14.52□□□□□ -0.09
RPN10YHR200W SPP381P38282 291 aaPredicted RBP14.52□□□□□ -0.09
RPN10YHR200W KAP95Q06142 861 aaKnown RBP14.52□□□□□ -0.09
RPN10YHR200W DIS3Q08162 1001 aaKnown RBP14.52□□□□□ -0.09
RPN10YHR200W GPM2Q12008 311 aa14.52□□□□□ -0.09
RPN10YHR200W YRR1Q12172 810 aa14.52□□□□□ -0.09
RPN10YHR200W ATP1P07251 545 aaKnown RBP14.51□□□□□ -0.09
RPN10YHR200W SPO16P17122 198 aa14.51□□□□□ -0.09
RPN10YHR200W MET4P32389 672 aa14.51□□□□□ -0.09
RPN10YHR200W TKL2P33315 681 aa14.51□□□□□ -0.09
RPN10YHR200W TAF1P46677 1066 aa14.51□□□□□ -0.09
RPN10YHR200W HLJ1P48353 224 aa14.51□□□□□ -0.09
RPN10YHR200W RNT1Q02555 471 aa14.51□□□□□ -0.09
RPN10YHR200W YML083CQ04526 418 aa14.51□□□□□ -0.09
RPN10YHR200W THI20Q08224 551 aa14.51□□□□□ -0.09
RPN10YHR200W TAO3P40468 2376 aa14.5□□□□□ -0.09
RPN10YHR200W ADK2P26364 225 aa14.5□□□□□ -0.09
RPN10YHR200W RPC37P36121 282 aa14.5□□□□□ -0.09
RPN10YHR200W ECM2P38241 364 aaKnown RBP14.5□□□□□ -0.09
RPN10YHR200W MSC7P38694 644 aa14.5□□□□□ -0.09
RPN10YHR200W YMR134WP40207 237 aa14.5□□□□□ -0.09
RPN10YHR200W TGL3P40308 642 aa14.5□□□□□ -0.09
RPN10YHR200W KHA1P40309 873 aa14.5□□□□□ -0.09
RPN10YHR200W ARG2P40360 574 aa14.5□□□□□ -0.09
RPN10YHR200W TMA108P40462 946 aa14.5□□□□□ -0.09
RPN10YHR200W YIL054WP40524 105 aa14.5□□□□□ -0.09
RPN10YHR200W OPT1P40897 799 aa14.5□□□□□ -0.09
RPN10YHR200W MIC19P43594 170 aa14.5□□□□□ -0.09
RPN10YHR200W TCB2P48231 1178 aa14.5□□□□□ -0.09
RPN10YHR200W CDC55Q00362 526 aa14.5□□□□□ -0.09
RPN10YHR200W THI7Q05998 598 aa14.5□□□□□ -0.09
RPN10YHR200W LAS1P36146 502 aaPredicted RBP14.49□□□□□ -0.09
RPN10YHR200W ABZ1P37254 787 aaPredicted RBP14.49□□□□□ -0.09
RPN10YHR200W MSG5P38590 489 aa14.49□□□□□ -0.09
RPN10YHR200W RGD2P43556 714 aa14.49□□□□□ -0.09
RPN10YHR200W BFA1P47113 574 aa14.49□□□□□ -0.09
RPN10YHR200W NBP2Q12163 236 aa14.49□□□□□ -0.09
RPN10YHR200W ERP2P39704 215 aa14.48□□□□□ -0.09
RPN10YHR200W JHD1P40034 492 aa14.48□□□□□ -0.09
RPN10YHR200W MMF1P40185 145 aaKnown RBP14.48□□□□□ -0.09
RPN10YHR200W YJR039WP47107 1121 aa14.48□□□□□ -0.09
RPN10YHR200W YNL040WP53960 456 aaPredicted RBP14.48□□□□□ -0.09
RPN10YHR200W RKM2Q03942 479 aa14.48□□□□□ -0.09
RPN10YHR200W PRM6Q04705 352 aa14.48□□□□□ -0.09
RPN10YHR200W MRN1Q08925 612 aaKnown RBP RIP-Chip data14.48□□□□□ -0.09not detected
RPN10YHR200W THI21Q08975 551 aa14.48□□□□□ -0.09
RPN10YHR200W SLY1P22213 666 aa14.47□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 95.8 ms