RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C CCT8P47079 568 aaKnown RBP3.15□□□□□ -1.9
NMD2YHR077C RRT6P53117 311 aaPredicted RBP3.15□□□□□ -1.9
NMD2YHR077C YGL036WP53185 909 aaPredicted RBP3.15□□□□□ -1.9
NMD2YHR077C DRN1P53255 507 aaKnown RBP3.15□□□□□ -1.9
NMD2YHR077C CUS1Q02554 436 aaPredicted RBP3.15□□□□□ -1.9
NMD2YHR077C YPL109CQ02981 657 aa3.15□□□□□ -1.9
NMD2YHR077C YML119WQ03208 357 aa3.15□□□□□ -1.9
NMD2YHR077C SWI6P09959 803 aa3.15□□□□□ -1.91
NMD2YHR077C TRX1P22217 103 aaKnown RBP3.15□□□□□ -1.91
NMD2YHR077C SMY2P32909 740 aaKnown RBP3.15□□□□□ -1.91
NMD2YHR077C LOS1P33418 1100 aaPredicted RBP3.15□□□□□ -1.91
NMD2YHR077C ASH1P34233 588 aa3.15□□□□□ -1.91
NMD2YHR077C YBL036CP38197 257 aa3.15□□□□□ -1.91
NMD2YHR077C SAW1P39735 261 aa3.15□□□□□ -1.91
NMD2YHR077C EMW1P42842 904 aaKnown RBP3.15□□□□□ -1.91
NMD2YHR077C ZIP2P53061 704 aa3.15□□□□□ -1.91
NMD2YHR077C SHE10P53075 577 aa3.15□□□□□ -1.91
NMD2YHR077C TBF1Q02457 562 aa3.15□□□□□ -1.91
NMD2YHR077C SHR3Q02774 210 aa3.15□□□□□ -1.91
NMD2YHR077C HOT1Q03213 719 aa3.15□□□□□ -1.91
NMD2YHR077C SXM1Q04175 944 aaKnown RBP3.15□□□□□ -1.91
NMD2YHR077C IVY1Q04934 453 aa3.15□□□□□ -1.91
NMD2YHR077C SHS1Q07657 551 aa3.15□□□□□ -1.91
NMD2YHR077C SLD7Q08457 257 aa3.15□□□□□ -1.91
NMD2YHR077C SEY1Q99287 776 aa3.15□□□□□ -1.91
NMD2YHR077C TPK1P06244 397 aa3.15□□□□□ -1.91
NMD2YHR077C CDC24P11433 854 aaPredicted RBP3.15□□□□□ -1.91
NMD2YHR077C PUT4P15380 627 aa3.15□□□□□ -1.91
NMD2YHR077C GYP6P32806 458 aa3.15□□□□□ -1.91
NMD2YHR077C UBC6P33296 250 aaPredicted RBP3.15□□□□□ -1.91
NMD2YHR077C OLA1P38219 394 aaKnown RBP3.15□□□□□ -1.91
NMD2YHR077C MMS4P38257 691 aa3.15□□□□□ -1.91
NMD2YHR077C YBP1P38315 674 aa3.15□□□□□ -1.91
NMD2YHR077C APM2P38700 605 aa3.15□□□□□ -1.91
NMD2YHR077C MSR1P38714 643 aa3.15□□□□□ -1.91
NMD2YHR077C ERP2P39704 215 aa3.15□□□□□ -1.91
NMD2YHR077C KHA1P40309 873 aa3.15□□□□□ -1.91
NMD2YHR077C SGM1P47166 707 aa3.15□□□□□ -1.91
NMD2YHR077C TEP1P53916 434 aa3.15□□□□□ -1.91
NMD2YHR077C ELP3Q02908 557 aaKnown RBP3.15□□□□□ -1.91
NMD2YHR077C VPS72Q03388 795 aa3.15□□□□□ -1.91
NMD2YHR077C THI7Q05998 598 aa3.15□□□□□ -1.91
NMD2YHR077C TAF10Q12030 206 aa3.15□□□□□ -1.91
NMD2YHR077C IMA3P0CW40 589 aa3.14□□□□□ -1.91
NMD2YHR077C IMA4P0CW41 589 aa3.14□□□□□ -1.91
NMD2YHR077C YER152CP10356 443 aa3.14□□□□□ -1.91
NMD2YHR077C PMS1P14242 873 aa3.14□□□□□ -1.91
NMD2YHR077C GAL11P19659 1081 aa3.14□□□□□ -1.91
NMD2YHR077C PRR1P28708 518 aa3.14□□□□□ -1.91
NMD2YHR077C YMC2P38087 329 aa3.14□□□□□ -1.91
NMD2YHR077C HEK2P38199 381 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
NMD2YHR077C SWC5P38326 303 aa3.14□□□□□ -1.91
NMD2YHR077C CBR1P38626 284 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C YHR054CP38780 354 aa3.14□□□□□ -1.91
NMD2YHR077C RSC30P38781 883 aa3.14□□□□□ -1.91
NMD2YHR077C SPC97P38863 823 aa3.14□□□□□ -1.91
NMD2YHR077C SPC72P39723 622 aa3.14□□□□□ -1.91
NMD2YHR077C YFL012WP43580 148 aa3.14□□□□□ -1.91
NMD2YHR077C ACF4P47129 309 aa3.14□□□□□ -1.91
NMD2YHR077C PAN2P53010 1115 aaPredicted RBP3.14□□□□□ -1.91
NMD2YHR077C CPR6P53691 371 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C JJJ1P53863 590 aa3.14□□□□□ -1.91
NMD2YHR077C GPD1Q00055 391 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C STE20Q03497 939 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C IMA2Q08295 589 aa3.14□□□□□ -1.91
NMD2YHR077C YOR059CQ08448 450 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C CTF3Q12748 733 aa3.14□□□□□ -1.91
NMD2YHR077C GAL10P04397 699 aa3.14□□□□□ -1.91
NMD2YHR077C POL3P15436 1097 aa3.14□□□□□ -1.91
NMD2YHR077C MGT1P26188 188 aa3.14□□□□□ -1.91
NMD2YHR077C PMI40P29952 429 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C PEP7P32609 515 aa3.14□□□□□ -1.91
NMD2YHR077C UBX7P38349 436 aa3.14□□□□□ -1.91
NMD2YHR077C GUA1P38625 525 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C AFG3P39925 761 aa3.14□□□□□ -1.91
NMD2YHR077C YCK3P39962 524 aa3.14□□□□□ -1.91
NMD2YHR077C DSE1P40077 573 aa3.14□□□□□ -1.91
NMD2YHR077C PRK1P40494 810 aa3.14□□□□□ -1.91
NMD2YHR077C SBE2P42223 864 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C NCS6P53088 359 aa3.14□□□□□ -1.91
NMD2YHR077C MND1P53102 219 aa3.14□□□□□ -1.91
NMD2YHR077C GND2P53319 492 aa3.14□□□□□ -1.91
NMD2YHR077C ADE12P80210 433 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C OSH6Q02201 448 aa3.14□□□□□ -1.91
NMD2YHR077C FMN1Q03778 218 aa3.14□□□□□ -1.91
NMD2YHR077C SGT2Q12118 346 aaKnown RBP3.14□□□□□ -1.91
NMD2YHR077C GPM3Q12326 303 aa3.14□□□□□ -1.91
NMD2YHR077C NOT5Q12514 560 aaPredicted RBP3.14□□□□□ -1.91
NMD2YHR077C PCD1Q12524 340 aa3.14□□□□□ -1.91
NMD2YHR077C CMD1P06787 147 aaKnown RBP3.13□□□□□ -1.91
NMD2YHR077C MAS2P11914 482 aa3.13□□□□□ -1.91
NMD2YHR077C ADE2P21264 571 aaKnown RBP3.13□□□□□ -1.91
NMD2YHR077C SSA4P22202 642 aaKnown RBP3.13□□□□□ -1.91
NMD2YHR077C VBA3P25594 458 aa3.13□□□□□ -1.91
NMD2YHR077C MVD1P32377 396 aaKnown RBP3.13□□□□□ -1.91
NMD2YHR077C CBF2P32504 956 aa3.13□□□□□ -1.91
NMD2YHR077C SLD2P34252 453 aa3.13□□□□□ -1.91
NMD2YHR077C VBA5P36172 582 aa3.13□□□□□ -1.91
NMD2YHR077C APN2P38207 520 aa3.13□□□□□ -1.91
NMD2YHR077C POP4P38336 279 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms