RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W THR1P17423 357 aaKnown RBP3.54□□□□□ -1.84
SSF1YHR066W FEN2P25621 512 aaKnown RBP3.54□□□□□ -1.84
SSF1YHR066W BFA1P47113 574 aa3.54□□□□□ -1.84
SSF1YHR066W NOP15P53927 220 aaPredicted RBP3.54□□□□□ -1.84
SSF1YHR066W YHM2Q04013 314 aa3.54□□□□□ -1.84
SSF1YHR066W STP4Q07351 490 aa3.54□□□□□ -1.84
SSF1YHR066W POM34Q12445 299 aa3.54□□□□□ -1.84
SSF1YHR066W RPS17AP02407 136 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W ERG20P08524 352 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W GLN4P13188 809 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W RPS17BP14127 136 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W DAL3P32459 195 aa3.53□□□□□ -1.84
SSF1YHR066W DID4P36108 232 aa3.53□□□□□ -1.84
SSF1YHR066W SET3P36124 751 aa3.53□□□□□ -1.84
SSF1YHR066W NDC80P40460 691 aa3.53□□□□□ -1.84
SSF1YHR066W BUD8P41698 603 aa3.53□□□□□ -1.84
SSF1YHR066W CCT7P42943 550 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W QRI1P43123 477 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W RFX1P48743 811 aa3.53□□□□□ -1.84
SSF1YHR066W CHS5Q12114 671 aaKnown RBP3.53□□□□□ -1.84
SSF1YHR066W USV1Q12132 391 aa3.53□□□□□ -1.84
SSF1YHR066W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SSF1YHR066W APM4Q99186 491 aa3.53□□□□□ -1.84
SSF1YHR066W CDC26P14724 124 aa3.52□□□□□ -1.85
SSF1YHR066W MSS1P32559 526 aaPredicted RBP3.52□□□□□ -1.85
SSF1YHR066W PIG2P40187 538 aa3.52□□□□□ -1.85
SSF1YHR066W YIL077CP40508 320 aa3.52□□□□□ -1.85
SSF1YHR066W IES1P43579 692 aa3.52□□□□□ -1.85
SSF1YHR066W YFT2Q06676 274 aa3.52□□□□□ -1.85
SSF1YHR066W SUT2Q12286 268 aa3.52□□□□□ -1.85
SSF1YHR066W PRP28P23394 588 aa3.51□□□□□ -1.85
SSF1YHR066W TSR4P25040 408 aa3.51□□□□□ -1.85
SSF1YHR066W EUG1P32474 517 aa3.51□□□□□ -1.85
SSF1YHR066W SER1P33330 395 aaKnown RBP3.51□□□□□ -1.85
SSF1YHR066W COS111P38308 924 aa3.51□□□□□ -1.85
SSF1YHR066W MPS3P47069 682 aa3.51□□□□□ -1.85
SSF1YHR066W ATG4P53867 494 aa3.51□□□□□ -1.85
SSF1YHR066W VBA4Q04602 768 aaKnown RBP3.51□□□□□ -1.85
SSF1YHR066W TAF3Q12297 353 aa3.51□□□□□ -1.85
SSF1YHR066W CLF1Q12309 687 aaPredicted RBP3.51□□□□□ -1.85
SSF1YHR066W RPS9BP05755 195 aaKnown RBP3.51□□□□□ -1.85
SSF1YHR066W KIN3P22209 435 aa3.51□□□□□ -1.85
SSF1YHR066W KIN82P25341 720 aa3.51□□□□□ -1.85
SSF1YHR066W YHR097CP38809 366 aaKnown RBP3.51□□□□□ -1.85
SSF1YHR066W DUN1P39009 513 aa3.51□□□□□ -1.85
SSF1YHR066W YJL206CP39529 758 aa3.51□□□□□ -1.85
SSF1YHR066W GPP2P40106 250 aaKnown RBP3.51□□□□□ -1.85
SSF1YHR066W KHA1P40309 873 aa3.51□□□□□ -1.85
SSF1YHR066W ARG2P40360 574 aa3.51□□□□□ -1.85
SSF1YHR066W VID28P40547 921 aa3.51□□□□□ -1.85
SSF1YHR066W PXA1P41909 870 aa3.51□□□□□ -1.85
SSF1YHR066W STU2P46675 888 aa3.51□□□□□ -1.85
SSF1YHR066W CTR1P49573 406 aa3.51□□□□□ -1.85
SSF1YHR066W VPS73P53142 486 aaKnown RBP3.51□□□□□ -1.85
SSF1YHR066W PTA1Q01329 785 aaPredicted RBP3.51□□□□□ -1.85
SSF1YHR066W PRE4P30657 266 aa3.5□□□□□ -1.85
SSF1YHR066W GLG1P36143 616 aa3.5□□□□□ -1.85
SSF1YHR066W CTP1P38152 299 aa3.5□□□□□ -1.85
SSF1YHR066W TDP1P38319 544 aa3.5□□□□□ -1.85
SSF1YHR066W DUG1P43616 481 aaKnown RBP3.5□□□□□ -1.85
SSF1YHR066W YJR120WP47157 116 aa3.5□□□□□ -1.85
SSF1YHR066W YGR151CP53287 111 aa3.5□□□□□ -1.85
SSF1YHR066W TMA17Q12513 150 aa3.5□□□□□ -1.85
SSF1YHR066W CDC43P18898 376 aa3.49□□□□□ -1.85
SSF1YHR066W ATP12P22135 325 aa3.49□□□□□ -1.85
SSF1YHR066W SEC15P22224 910 aa3.49□□□□□ -1.85
SSF1YHR066W FUB1P25659 250 aa3.49□□□□□ -1.85
SSF1YHR066W MF(ALPHA)2P32435 120 aa3.49□□□□□ -1.85
SSF1YHR066W EMP70P32802 667 aa3.49□□□□□ -1.85
SSF1YHR066W CDS1P38221 457 aa3.49□□□□□ -1.85
SSF1YHR066W TAH11P47112 604 aa3.49□□□□□ -1.85
SSF1YHR066W TAF4P50105 388 aa3.49□□□□□ -1.85
SSF1YHR066W YDL086WQ07505 273 aa3.49□□□□□ -1.85
SSF1YHR066W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SSF1YHR066W ACO1P19414 778 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SSF1YHR066W PRP22P24384 1145 aaKnown RBP3.48□□□□□ -1.85
SSF1YHR066W MTC7P32633 139 aa3.48□□□□□ -1.85
SSF1YHR066W YBR071WP38243 211 aa3.48□□□□□ -1.85
SSF1YHR066W ENP1P38333 483 aaKnown RBP3.48□□□□□ -1.85
SSF1YHR066W KSP1P38691 1029 aaKnown RBP3.48□□□□□ -1.85
SSF1YHR066W CRG1P38892 291 aaRIP-Chip data3.48□□□□□ -1.85not detected
SSF1YHR066W BDH2P39713 417 aa3.48□□□□□ -1.85
SSF1YHR066W ATF1P40353 525 aa3.48□□□□□ -1.85
SSF1YHR066W PRM2P40534 656 aa3.48□□□□□ -1.85
SSF1YHR066W NIT2P47016 307 aa3.48□□□□□ -1.85
SSF1YHR066W SPO1P53541 631 aa3.48□□□□□ -1.85
SSF1YHR066W NSE5Q03718 556 aa3.48□□□□□ -1.85
SSF1YHR066W PPN1Q04119 674 aa3.48□□□□□ -1.85
SSF1YHR066W IZH3Q07959 543 aa3.48□□□□□ -1.85
SSF1YHR066W RMP1Q12530 201 aa3.48□□□□□ -1.85
SSF1YHR066W ABF1P14164 731 aa3.47□□□□□ -1.85
SSF1YHR066W GFA1P14742 717 aaKnown RBP3.47□□□□□ -1.85
SSF1YHR066W TUP1P16649 713 aa3.47□□□□□ -1.85
SSF1YHR066W HXT4P32467 576 aa3.47□□□□□ -1.85
SSF1YHR066W GMH1P36125 273 aa3.47□□□□□ -1.85
SSF1YHR066W TMN3P40071 706 aa3.47□□□□□ -1.85
SSF1YHR066W FTR1P40088 404 aa3.47□□□□□ -1.85
SSF1YHR066W NMA2P53204 395 aa3.47□□□□□ -1.85
SSF1YHR066W SNF12P53628 566 aa3.47□□□□□ -1.85
SSF1YHR066W COG6P53959 839 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms