RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C RIC1P40395 1056 aa2.85□□□□□ -1.95
SSN2YDR443C SPO74P45819 413 aa2.85□□□□□ -1.95
SSN2YDR443C OAZ1Q02803 292 aa2.85□□□□□ -1.95
SSN2YDR443C SNO4Q04902 237 aa2.85□□□□□ -1.95
SSN2YDR443C EST2Q06163 884 aa2.85□□□□□ -1.95
SSN2YDR443C EMG1Q06287 252 aaKnown RBP2.85□□□□□ -1.95
SSN2YDR443C MET7Q08645 548 aa2.85□□□□□ -1.95
SSN2YDR443C HSP33Q08914 237 aaKnown RBP2.85□□□□□ -1.95
SSN2YDR443C HSP32Q08992 237 aa2.85□□□□□ -1.95
SSN2YDR443C CWC2Q12046 339 aaPredicted RBP2.85□□□□□ -1.95
SSN2YDR443C ARP7Q12406 477 aa2.85□□□□□ -1.95
SSN2YDR443C PHO3P24031 467 aa2.84□□□□□ -1.95
SSN2YDR443C NPP1P25353 742 aa2.84□□□□□ -1.95
SSN2YDR443C SED4P25365 1065 aa2.84□□□□□ -1.95
SSN2YDR443C HOG1P32485 435 aa2.84□□□□□ -1.95
SSN2YDR443C YER034WP40022 185 aaKnown RBP2.84□□□□□ -1.95
SSN2YDR443C EFM4P40516 257 aa2.84□□□□□ -1.95
SSN2YDR443C SAP155P43612 1002 aa2.84□□□□□ -1.95
SSN2YDR443C STU2P46675 888 aa2.84□□□□□ -1.95
SSN2YDR443C SHE10P53075 577 aa2.84□□□□□ -1.95
SSN2YDR443C YPQ2Q06328 317 aa2.84□□□□□ -1.95
SSN2YDR443C APL4Q12028 832 aa2.84□□□□□ -1.95
SSN2YDR443C PDH1Q12428 516 aaKnown RBP2.84□□□□□ -1.95
SSN2YDR443C PGA3Q12746 312 aaKnown RBP2.84□□□□□ -1.95
SSN2YDR443C LAT1P12695 482 aaKnown RBP2.84□□□□□ -1.95
SSN2YDR443C SGF29P25554 259 aa2.84□□□□□ -1.95
SSN2YDR443C DAL80P26343 269 aa2.84□□□□□ -1.95
SSN2YDR443C POT1P27796 417 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SSN2YDR443C ERG3P32353 365 aa2.84□□□□□ -1.95
SSN2YDR443C UME6P39001 836 aa2.84□□□□□ -1.95
SSN2YDR443C TOK1P40310 691 aa2.84□□□□□ -1.95
SSN2YDR443C CAF16P43569 289 aa2.84□□□□□ -1.95
SSN2YDR443C AIP1P46680 615 aaKnown RBP2.84□□□□□ -1.95
SSN2YDR443C VTC4P47075 721 aa2.84□□□□□ -1.95
SSN2YDR443C FCP1Q03254 732 aa2.84□□□□□ -1.95
SSN2YDR443C DFG5Q05031 458 aa2.84□□□□□ -1.95
SSN2YDR443C PMT7Q06644 662 aa2.84□□□□□ -1.95
SSN2YDR443C RTN2Q12443 393 aa2.84□□□□□ -1.95
SSN2YDR443C SRB8P25648 1427 aa2.84□□□□□ -1.96
SSN2YDR443C GCS1P35197 352 aa2.84□□□□□ -1.96
SSN2YDR443C YAP3P38749 330 aa2.84□□□□□ -1.96
SSN2YDR443C HXT6P39003 570 aaKnown RBP2.84□□□□□ -1.96
SSN2YDR443C HXT7P39004 570 aa2.84□□□□□ -1.96
SSN2YDR443C SCS2P40075 244 aaKnown RBP2.84□□□□□ -1.96
SSN2YDR443C YIL161WP40449 235 aaKnown RBP2.84□□□□□ -1.96
SSN2YDR443C ARF3P40994 183 aaRIP-Chip data2.84□□□□□ -1.96 RIP-Chip
SSN2YDR443C FOL2P51601 243 aaKnown RBP2.84□□□□□ -1.96
SSN2YDR443C SAP4P53036 818 aa2.84□□□□□ -1.96
SSN2YDR443C CWC21Q03375 135 aaKnown RBP2.84□□□□□ -1.96
SSN2YDR443C ROX1P25042 368 aa2.83□□□□□ -1.96
SSN2YDR443C SEC65P29478 273 aa2.83□□□□□ -1.96
SSN2YDR443C CBF2P32504 956 aa2.83□□□□□ -1.96
SSN2YDR443C SET3P36124 751 aa2.83□□□□□ -1.96
SSN2YDR443C CTM1P38818 585 aa2.83□□□□□ -1.96
SSN2YDR443C YER010CP40011 234 aa2.83□□□□□ -1.96
SSN2YDR443C PUG1P40100 303 aa2.83□□□□□ -1.96
SSN2YDR443C NEO1P40527 1151 aa2.83□□□□□ -1.96
SSN2YDR443C OCA1P50946 238 aaPredicted RBP2.83□□□□□ -1.96
SSN2YDR443C HLR1Q04429 423 aa2.83□□□□□ -1.96
SSN2YDR443C MDM36Q06820 579 aa2.83□□□□□ -1.96
SSN2YDR443C BUD20Q08004 166 aaPredicted RBP2.83□□□□□ -1.96
SSN2YDR443C AMS1P22855 1083 aa2.83□□□□□ -1.96
SSN2YDR443C MCM3P24279 971 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C CLB4P24871 460 aa2.83□□□□□ -1.96
SSN2YDR443C PEP3P27801 918 aa2.83□□□□□ -1.96
SSN2YDR443C RPN2P32565 945 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C YEL1P34225 687 aa2.83□□□□□ -1.96
SSN2YDR443C STB6P36085 766 aa2.83□□□□□ -1.96
SSN2YDR443C PTC4P38089 393 aa2.83□□□□□ -1.96
SSN2YDR443C GIP1P38229 639 aa2.83□□□□□ -1.96
SSN2YDR443C CCT5P40413 562 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C RRD1P40454 393 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C DSD1P53095 428 aa2.83□□□□□ -1.96
SSN2YDR443C FRK1Q03002 865 aaPredicted RBP2.83□□□□□ -1.96
SSN2YDR443C RSF1Q05043 376 aa2.83□□□□□ -1.96
SSN2YDR443C AVO1Q08236 1176 aa2.83□□□□□ -1.96
SSN2YDR443C CDC19P00549 500 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C LEU2P04173 364 aaPredicted RBP2.83□□□□□ -1.96
SSN2YDR443C EST1P17214 699 aaPredicted RBP2.83□□□□□ -1.96
SSN2YDR443C RPB4P20433 221 aaPredicted RBP2.83□□□□□ -1.96
SSN2YDR443C DBP2P24783 546 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C STE50P25344 346 aa2.83□□□□□ -1.96
SSN2YDR443C BFR1P38934 470 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SSN2YDR443C ATF1P40353 525 aa2.83□□□□□ -1.96
SSN2YDR443C ENT3P47160 408 aa2.83□□□□□ -1.96
SSN2YDR443C YDR131CQ03899 556 aa2.83□□□□□ -1.96
SSN2YDR443C ARP9Q05123 467 aa2.83□□□□□ -1.96
SSN2YDR443C UTP4Q06679 776 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C RVB2Q12464 471 aaKnown RBP2.83□□□□□ -1.96
SSN2YDR443C NOT3P06102 836 aaKnown RBP2.82□□□□□ -1.96
SSN2YDR443C ADH4P10127 382 aa2.82□□□□□ -1.96
SSN2YDR443C OM45P16547 393 aa2.82□□□□□ -1.96
SSN2YDR443C MGM1P32266 881 aa2.82□□□□□ -1.96
SSN2YDR443C SSE1P32589 693 aaKnown RBP2.82□□□□□ -1.96
SSN2YDR443C HSM3P38348 480 aa2.82□□□□□ -1.96
SSN2YDR443C YHR097CP38809 366 aaKnown RBP2.82□□□□□ -1.96
SSN2YDR443C BUD16P39988 312 aa2.82□□□□□ -1.96
SSN2YDR443C CCM1P48237 864 aaPredicted RBP2.82□□□□□ -1.96
SSN2YDR443C YBP2P53169 641 aa2.82□□□□□ -1.96
SSN2YDR443C MAK10Q02197 733 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms