RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C CTF13P35203 478 aa4□□□□□ -1.77
RRP42YDL111C SDS22P36047 338 aa4□□□□□ -1.77
RRP42YDL111C SAW1P39735 261 aa4□□□□□ -1.77
RRP42YDL111C PZF1P39933 429 aa4□□□□□ -1.77
RRP42YDL111C GID8P40208 455 aa4□□□□□ -1.77
RRP42YDL111C ASK10P48361 1146 aa4□□□□□ -1.77
RRP42YDL111C TIM44Q01852 431 aa4□□□□□ -1.77
RRP42YDL111C YMR210WQ03649 449 aa4□□□□□ -1.77
RRP42YDL111C BRE1Q07457 700 aaKnown RBP4□□□□□ -1.77
RRP42YDL111C IRC10Q08118 586 aa4□□□□□ -1.77
RRP42YDL111C YOL114CQ12322 202 aa4□□□□□ -1.77
RRP42YDL111C GPR1Q12361 961 aa4□□□□□ -1.77
RRP42YDL111C TUB3P09734 445 aaKnown RBP3.99□□□□□ -1.77
RRP42YDL111C CDC26P14724 124 aa3.99□□□□□ -1.77
RRP42YDL111C ACO1P19414 778 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
RRP42YDL111C ATP12P22135 325 aa3.99□□□□□ -1.77
RRP42YDL111C MSM1P22438 575 aa3.99□□□□□ -1.77
RRP42YDL111C NGG1P32494 702 aa3.99□□□□□ -1.77
RRP42YDL111C APN2P38207 520 aa3.99□□□□□ -1.77
RRP42YDL111C EXO84P38261 753 aa3.99□□□□□ -1.77
RRP42YDL111C YHR202WP38887 602 aa3.99□□□□□ -1.77
RRP42YDL111C ERP2P39704 215 aa3.99□□□□□ -1.77
RRP42YDL111C SSP120P39931 234 aaKnown RBP3.99□□□□□ -1.77
RRP42YDL111C VID27P40157 782 aa3.99□□□□□ -1.77
RRP42YDL111C VID28P40547 921 aa3.99□□□□□ -1.77
RRP42YDL111C IES1P43579 692 aa3.99□□□□□ -1.77
RRP42YDL111C IRC5P43610 853 aa3.99□□□□□ -1.77
RRP42YDL111C YBP2P53169 641 aa3.99□□□□□ -1.77
RRP42YDL111C TEP1P53916 434 aa3.99□□□□□ -1.77
RRP42YDL111C CEG1Q01159 459 aaPredicted RBP3.99□□□□□ -1.77
RRP42YDL111C HLR1Q04429 423 aa3.99□□□□□ -1.77
RRP42YDL111C YLR407WQ06070 228 aa3.99□□□□□ -1.77
RRP42YDL111C PSF3Q12146 194 aa3.99□□□□□ -1.77
RRP42YDL111C ARP7Q12406 477 aa3.99□□□□□ -1.77
RRP42YDL111C TRM11Q12463 433 aa3.99□□□□□ -1.77
RRP42YDL111C RPS17AP02407 136 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C GLN4P13188 809 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C RPS17BP14127 136 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C APA1P16550 321 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C PHO3P24031 467 aa3.98□□□□□ -1.77
RRP42YDL111C MSH1P25846 959 aa3.98□□□□□ -1.77
RRP42YDL111C DGR2P32330 852 aa3.98□□□□□ -1.77
RRP42YDL111C MF(ALPHA)2P32435 120 aa3.98□□□□□ -1.77
RRP42YDL111C SAK1P38990 1142 aa3.98□□□□□ -1.77
RRP42YDL111C STL1P39932 569 aa3.98□□□□□ -1.77
RRP42YDL111C VPS27P40343 622 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C ASI2P53895 289 aa3.98□□□□□ -1.77
RRP42YDL111C MTD1Q02046 320 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C MUK1Q02866 612 aa3.98□□□□□ -1.77
RRP42YDL111C YML131WQ03102 365 aa3.98□□□□□ -1.77
RRP42YDL111C YMR206WQ03695 313 aa3.98□□□□□ -1.77
RRP42YDL111C MUS81Q04149 632 aaPredicted RBP3.98□□□□□ -1.77
RRP42YDL111C COG4Q06096 861 aa3.98□□□□□ -1.77
RRP42YDL111C NGL1Q08213 363 aaKnown RBP3.98□□□□□ -1.77
RRP42YDL111C CWC2Q12046 339 aaPredicted RBP3.98□□□□□ -1.77
RRP42YDL111C SWM1Q12379 170 aa3.98□□□□□ -1.77
RRP42YDL111C IMG2P25642 146 aaPredicted RBP3.97□□□□□ -1.77
RRP42YDL111C HXT4P32467 576 aa3.97□□□□□ -1.77
RRP42YDL111C PET127P32606 800 aa3.97□□□□□ -1.77
RRP42YDL111C TAF5P38129 798 aa3.97□□□□□ -1.77
RRP42YDL111C DUN1P39009 513 aa3.97□□□□□ -1.77
RRP42YDL111C ECM1P39715 212 aa3.97□□□□□ -1.77
RRP42YDL111C YIL092WP40497 633 aa3.97□□□□□ -1.77
RRP42YDL111C PFA3P42836 336 aa3.97□□□□□ -1.77
RRP42YDL111C LEE1Q02799 301 aaKnown RBP3.97□□□□□ -1.77
RRP42YDL111C NSE5Q03718 556 aa3.97□□□□□ -1.77
RRP42YDL111C MCM21Q06675 368 aa3.97□□□□□ -1.77
RRP42YDL111C OPY2Q06810 360 aa3.97□□□□□ -1.77
RRP42YDL111C NUR1Q12066 484 aa3.97□□□□□ -1.77
RRP42YDL111C RPN12P32496 274 aa3.96□□□□□ -1.78
RRP42YDL111C MTH1P35198 433 aa3.96□□□□□ -1.78
RRP42YDL111C APL2P36000 726 aaPredicted RBP3.96□□□□□ -1.78
RRP42YDL111C CUE2P36075 443 aaKnown RBP3.96□□□□□ -1.78
RRP42YDL111C APT2P36973 181 aa3.96□□□□□ -1.78
RRP42YDL111C YBR259WP38338 688 aa3.96□□□□□ -1.78
RRP42YDL111C SIC1P38634 284 aa3.96□□□□□ -1.78
RRP42YDL111C EAF5P39995 279 aa3.96□□□□□ -1.78
RRP42YDL111C VHR1P40522 640 aa3.96□□□□□ -1.78
RRP42YDL111C IML2P47031 731 aa3.96□□□□□ -1.78
RRP42YDL111C PRP31P49704 494 aaPredicted RBP3.96□□□□□ -1.78
RRP42YDL111C GND2P53319 492 aa3.96□□□□□ -1.78
RRP42YDL111C ARG5,6Q01217 863 aa3.96□□□□□ -1.78
RRP42YDL111C REC102Q02721 264 aa3.96□□□□□ -1.78
RRP42YDL111C PKH1Q03407 766 aa3.96□□□□□ -1.78
RRP42YDL111C PPN1Q04119 674 aa3.96□□□□□ -1.78
RRP42YDL111C BLS1Q06071 122 aa3.96□□□□□ -1.78
RRP42YDL111C FRE5Q08908 694 aa3.96□□□□□ -1.78
RRP42YDL111C YLR415CO13578 112 aa3.95□□□□□ -1.78
RRP42YDL111C MET3P08536 511 aa3.95□□□□□ -1.78
RRP42YDL111C YEL076C-AP0CX16 216 aa3.95□□□□□ -1.78
RRP42YDL111C YLR464WP0CX17 216 aa3.95□□□□□ -1.78
RRP42YDL111C PYC1P11154 1178 aaKnown RBP3.95□□□□□ -1.78
RRP42YDL111C HSC82P15108 705 aaKnown RBP3.95□□□□□ -1.78
RRP42YDL111C PRP4P20053 465 aaKnown RBP3.95□□□□□ -1.78
RRP42YDL111C TGL1P34163 548 aa3.95□□□□□ -1.78
RRP42YDL111C PPS1P38148 807 aa3.95□□□□□ -1.78
RRP42YDL111C NOC2P39744 710 aaKnown RBP3.95□□□□□ -1.78
RRP42YDL111C YEL076CP39971 216 aa3.95□□□□□ -1.78
RRP42YDL111C ELO3P40319 345 aa3.95□□□□□ -1.78
RRP42YDL111C RPT2P40327 437 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms