RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	STE6	P12866	1290 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	HAP4	P14064	554 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	TSA1	P34760	196 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	YKR051W	P36142	418 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	YBR056W	P38081	501 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	NMD2	P38798	1089 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	RPN10	P38886	268 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	SAH1	P39954	449 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	AVT1	P47082	602 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	NPY1	P53164	384 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	YNL146W	P53906	100 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	YMR265C	Q03508	461 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	PUF6	Q04373	656 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	UTP13	Q05946	817 aa	Known RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	TFC6	Q06339	672 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	SPN1	Q06505	410 aa	Predicted RBP	4.85	□□□□□ -1.63
RPN6	YDL097C	OSW2	Q12202	724 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	YOR111W	Q99210	232 aa		4.85	□□□□□ -1.63
RPN6	YDL097C	ADE3	P07245	946 aa	Known RBP	4.84	□□□□□ -1.63
RPN6	YDL097C	PRR1	P28708	518 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	ASF1	P32447	279 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	RER2	P35196	286 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	SKN7	P38889	622 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	NUP60	P39705	539 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	COQ5	P49017	307 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	ACS2	P52910	683 aa	Known RBP	4.84	□□□□□ -1.63
RPN6	YDL097C	RTT102	P53330	157 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	AIM33	Q04516	312 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	YFT2	Q06676	274 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	TAF10	Q12030	206 aa		4.84	□□□□□ -1.63
RPN6	YDL097C	MET6	P05694	767 aa	Known RBP	4.83	□□□□□ -1.64
RPN6	YDL097C	RPL4A	P10664	362 aa	Known RBP	4.83	□□□□□ -1.64
RPN6	YDL097C	SUI2	P20459	304 aa	Known RBP	4.83	□□□□□ -1.64
RPN6	YDL097C	SRO9	P25567	434 aa	Known RBP	4.83	□□□□□ -1.64
RPN6	YDL097C	DAL1	P32375	460 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	SLA2	P33338	968 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	FYV10	P40492	516 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	RPL4B	P49626	362 aa	Known RBP	4.83	□□□□□ -1.64
RPN6	YDL097C	CUL3	P53202	744 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	BNA5	Q05979	453 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	ECM7	Q06200	448 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	SYT1	Q06836	1226 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	IES4	Q08561	116 aa		4.83	□□□□□ -1.64
RPN6	YDL097C	STE13	P33894	931 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	MPE1	P35728	441 aa	Known RBP	4.82	□□□□□ -1.64
RPN6	YDL097C	CRG1	P38892	291 aa	RIP-Chip data	4.82	□□□□□ -1.64	not detected
RPN6	YDL097C	SAK1	P38990	1142 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	DLD3	P39976	496 aa	Known RBP	4.82	□□□□□ -1.64
RPN6	YDL097C	MRPS35	P53292	345 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	GCN5	Q03330	439 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	WAR1	Q03631	944 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	GIS4	Q04233	774 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	MCP2	Q06567	569 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	TSC13	Q99190	310 aa		4.82	□□□□□ -1.64
RPN6	YDL097C	TRL1	P09880	827 aa	Known RBP	4.81	□□□□□ -1.64
RPN6	YDL097C	DIT1	P21623	536 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	RNR3	P21672	869 aa	Known RBP	4.81	□□□□□ -1.64
RPN6	YDL097C	YHR219W	P38900	624 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	CCT3	P39077	534 aa	Known RBP	4.81	□□□□□ -1.64
RPN6	YDL097C	NPA3	P47122	385 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	BNI5	P53890	448 aa	Known RBP	4.81	□□□□□ -1.64
RPN6	YDL097C	SWS2	P53937	143 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	PEX13	P80667	386 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	RPN4	Q03465	531 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	TRS130	Q03660	1102 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	PRM6	Q04705	352 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	PNP1	Q05788	311 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	SMD2	Q06217	110 aa	Known RBP	4.81	□□□□□ -1.64
RPN6	YDL097C	PUN1	Q06991	263 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	BRE1	Q07457	700 aa	Known RBP	4.81	□□□□□ -1.64
RPN6	YDL097C	YDR061W	Q12298	539 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	CTF3	Q12748	733 aa		4.81	□□□□□ -1.64
RPN6	YDL097C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RPN6	YDL097C	TRM2	P33753	639 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	ATG12	P38316	186 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	HEM14	P40012	539 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	DSN1	P40568	576 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	YGL260W	P53056	76 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	TRM82	Q03774	444 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	SHS1	Q07657	551 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	OPI10	Q08202	246 aa		4.8	□□□□□ -1.64
RPN6	YDL097C	YOR097C	Q12274	175 aa	Predicted RBP	4.8	□□□□□ -1.64
RPN6	YDL097C	SRD1	P09007	221 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	TAF13	P11747	167 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	VAN1	P23642	535 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	BEM1	P29366	551 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	LYP1	P32487	611 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	COT1	P32798	439 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	SAS3	P34218	831 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	YKL050C	P35736	922 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	MMS4	P38257	691 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	GAA1	P39012	614 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	BOL3	P39724	118 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	MDJ2	P42834	146 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	VEL1	P53058	206 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	PEX14	P53112	341 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	YNL092W	P53934	400 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	AQR1	P53943	586 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	MFM1	Q02783	413 aa		4.79	□□□□□ -1.64
RPN6	YDL097C	ISU1	Q03020	165 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms