RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	MDM1	Q01846	1127 aa		4.93	□□□□□ -1.62
RXT3	YDL076C	YPR071W	Q12346	211 aa		4.93	□□□□□ -1.62
RXT3	YDL076C	ATG11	Q12527	1178 aa		4.93	□□□□□ -1.62
RXT3	YDL076C	RPL11B	Q3E757	174 aa	Predicted RBP	4.93	□□□□□ -1.62
RXT3	YDL076C	ADE8	P04161	214 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	POL3	P15436	1097 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	PEP3	P27801	918 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	SYN8	P31377	255 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	PRS1	P32895	427 aa	Known RBP	4.92	□□□□□ -1.62
RXT3	YDL076C	PET10	P36139	283 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	SAF1	P38352	637 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	SIT1	P39980	628 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	YJL045W	P47052	634 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	RPS7B	P48164	190 aa	Known RBP	4.92	□□□□□ -1.62
RXT3	YDL076C	ZPR1	P53303	486 aa	Known RBP	4.92	□□□□□ -1.62
RXT3	YDL076C	CNM67	P53865	581 aa	Known RBP	4.92	□□□□□ -1.62
RXT3	YDL076C	PTA1	Q01329	785 aa	Predicted RBP	4.92	□□□□□ -1.62
RXT3	YDL076C	MYO5	Q04439	1219 aa	Known RBP	4.92	□□□□□ -1.62
RXT3	YDL076C	YMR321C	Q04898	105 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	MMR1	Q06324	491 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	DSE3	Q08729	430 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	ACM1	Q08981	209 aa		4.92	□□□□□ -1.62
RXT3	YDL076C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RXT3	YDL076C	FLR1	P38124	548 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	YHR131C	P38835	850 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	NMD3	P38861	518 aa	Known RBP	4.91	□□□□□ -1.62
RXT3	YDL076C	SAH1	P39954	449 aa	Known RBP	4.91	□□□□□ -1.62
RXT3	YDL076C	RPN3	P40016	523 aa	Known RBP	4.91	□□□□□ -1.62
RXT3	YDL076C	MMF1	P40185	145 aa	Known RBP	4.91	□□□□□ -1.62
RXT3	YDL076C	ALT2	P52892	507 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	MAL11	P53048	616 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RXT3	YDL076C	TPP1	Q03796	238 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	LCD1	Q04377	747 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	CSM3	Q04659	317 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	TFC6	Q06339	672 aa		4.91	□□□□□ -1.62
RXT3	YDL076C	CYC7	P00045	113 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	RNR3	P21672	869 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	DBP2	P24783	546 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	SRO9	P25567	434 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	PRO1	P32264	428 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	MSS51	P32335	436 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	RME1	P32338	300 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	APN2	P38207	520 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	AKR1	P39010	764 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	CCT3	P39077	534 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	YEL025C	P39991	1188 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	MET13	P53128	600 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	RTS3	P53289	263 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	NCE103	P53615	221 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	BNI5	P53890	448 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	YDR341C	Q05506	607 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	SUE1	Q06524	206 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	HIF1	Q12373	385 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	TY1A-NL1	Q12391	440 aa	Known RBP	4.9	□□□□□ -1.63
RXT3	YDL076C	MDM12	Q92328	271 aa		4.9	□□□□□ -1.63
RXT3	YDL076C	MYO1	P08964	1928 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	UBC1	P21734	215 aa	Known RBP	4.89	□□□□□ -1.63
RXT3	YDL076C	MEF1	P25039	761 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	CDC12	P32468	407 aa	Known RBP	4.89	□□□□□ -1.63
RXT3	YDL076C	AAP1	P37898	856 aa	Known RBP	4.89	□□□□□ -1.63
RXT3	YDL076C	OPY1	P38271	328 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	SUL1	P38359	859 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	BUD16	P39988	312 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	PMT3	P47190	753 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	TNA1	P53322	534 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	HOS3	Q02959	697 aa	Known RBP	4.89	□□□□□ -1.63
RXT3	YDL076C	PHM6	Q05637	104 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	SMC5	Q08204	1093 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	PUS7	Q08647	676 aa	Known RBP	4.89	□□□□□ -1.63
RXT3	YDL076C	HFI1	Q12060	488 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	DAP1	Q12091	152 aa		4.89	□□□□□ -1.63
RXT3	YDL076C	UBR2	Q07963	1872 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	PGK1	P00560	416 aa	Known RBP	4.88	□□□□□ -1.63
RXT3	YDL076C	CDC48	P25694	835 aa	Known RBP	4.88	□□□□□ -1.63
RXT3	YDL076C	YSC84	P32793	468 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	SLA2	P33338	968 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	CSM2	P40465	213 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	SPO22	P40511	975 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	YGR237C	P50089	785 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	SCS3	P53012	380 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	YNL134C	P53912	376 aa	Known RBP	4.88	□□□□□ -1.63
RXT3	YDL076C	ARP5	P53946	755 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	CRD1	Q07560	283 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	YOR111W	Q99210	232 aa		4.88	□□□□□ -1.63
RXT3	YDL076C	RPS4A	P0CX35	261 aa	Known RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	RPS4B	P0CX36	261 aa	Known RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	SRP54	P20424	541 aa	Known RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	VBA3	P25594	458 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	NAM7	P30771	971 aa	Known RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	ATG19	P35193	415 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	MRPL7	P36519	292 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	FMP10	P40098	244 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	TOK1	P40310	691 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	CCM1	P48237	864 aa	Predicted RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	ALT1	P52893	592 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	SDA1	P53313	767 aa	Known RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	EMI2	Q04409	500 aa	Known RBP	4.87	□□□□□ -1.63
RXT3	YDL076C	HRQ1	Q05549	1077 aa		4.87	□□□□□ -1.63
RXT3	YDL076C	SDH5	Q08230	162 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms