RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	MF(ALPHA)2	P32435	120 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	HXT4	P32467	576 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	YPT7	P32939	208 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	NIC96	P34077	839 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	KTR4	P38131	464 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	PXA1	P41909	870 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	BIT61	P47041	543 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	ENP2	P48234	707 aa	Known RBP	6.95	□□□□□ -1.3
SIR2	YDL042C	ESC8	Q08119	714 aa		6.95	□□□□□ -1.3
SIR2	YDL042C	DEF1	P35732	738 aa	Known RBP	6.94	□□□□□ -1.3
SIR2	YDL042C	SRP68	P38687	599 aa	Known RBP	6.94	□□□□□ -1.3
SIR2	YDL042C	NUP60	P39705	539 aa		6.94	□□□□□ -1.3
SIR2	YDL042C	BUD8	P41698	603 aa		6.94	□□□□□ -1.3
SIR2	YDL042C	FRE5	Q08908	694 aa		6.94	□□□□□ -1.3
SIR2	YDL042C	HIR3	P47171	1648 aa		6.94	□□□□□ -1.3
SIR2	YDL042C	SPA2	P23201	1466 aa	Known RBP	6.94	□□□□□ -1.3
SIR2	YDL042C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.93	□□□□□ -1.3	not detected
SIR2	YDL042C	PEX1	P24004	1043 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	FMO1	P38866	432 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	CCT3	P39077	534 aa	Known RBP	6.93	□□□□□ -1.3
SIR2	YDL042C	RNT1	Q02555	471 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	POM34	Q12445	299 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	PRP22	P24384	1145 aa	Known RBP	6.93	□□□□□ -1.3
SIR2	YDL042C	YJL163C	P46996	555 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	TAF4	P50105	388 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	HOL1	P53389	586 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	PPN1	Q04119	674 aa		6.93	□□□□□ -1.3
SIR2	YDL042C	CWC2	Q12046	339 aa	Predicted RBP	6.93	□□□□□ -1.3
SIR2	YDL042C	RPS9B	P05755	195 aa	Known RBP	6.92	□□□□□ -1.3
SIR2	YDL042C	SEC15	P22224	910 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	KIN82	P25341	720 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	BCD1	P38772	366 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	TAF1	P46677	1066 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	MET14	Q02196	202 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	NSE5	Q03718	556 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	IRC13	Q08630	104 aa		6.92	□□□□□ -1.3
SIR2	YDL042C	PMI40	P29952	429 aa	Known RBP	6.91	□□□□□ -1.3
SIR2	YDL042C	MVD1	P32377	396 aa	Known RBP	6.91	□□□□□ -1.3
SIR2	YDL042C	IRC5	P43610	853 aa		6.91	□□□□□ -1.3
SIR2	YDL042C	UBC11	P52492	156 aa		6.91	□□□□□ -1.3
SIR2	YDL042C	ADY4	Q05955	493 aa		6.91	□□□□□ -1.3
SIR2	YDL042C	THI22	Q06490	572 aa		6.91	□□□□□ -1.3
SIR2	YDL042C	YLR040C	Q07988	224 aa		6.91	□□□□□ -1.3
SIR2	YDL042C	ALG7	P07286	448 aa		6.9	□□□□□ -1.3
SIR2	YDL042C	YEF3	P16521	1044 aa	Known RBP	6.9	□□□□□ -1.3
SIR2	YDL042C	HIS7	P33734	552 aa	Known RBP	6.9	□□□□□ -1.3
SIR2	YDL042C	SUL1	P38359	859 aa		6.9	□□□□□ -1.3
SIR2	YDL042C	TRM2	P33753	639 aa		6.9	□□□□□ -1.31
SIR2	YDL042C	YHR033W	P38690	423 aa		6.9	□□□□□ -1.31
SIR2	YDL042C	REV7	P38927	245 aa		6.9	□□□□□ -1.31
SIR2	YDL042C	EAF5	P39995	279 aa		6.9	□□□□□ -1.31
SIR2	YDL042C	RGC1	Q06108	1083 aa	Known RBP	6.9	□□□□□ -1.31
SIR2	YDL042C	OMS1	Q06668	471 aa		6.9	□□□□□ -1.31
SIR2	YDL042C	GAL1	P04385	528 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	YEL076C-A	P0CX16	216 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	YLR464W	P0CX17	216 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	KCC4	P25389	1037 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	PRE4	P30657	266 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	YKL133C	P36066	463 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	YEL076C	P39971	216 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	PIP2	P52960	996 aa		6.89	□□□□□ -1.31
SIR2	YDL042C	CNM67	P53865	581 aa	Known RBP	6.89	□□□□□ -1.31
SIR2	YDL042C	URN1	Q06525	465 aa	Known RBP	6.89	□□□□□ -1.31
SIR2	YDL042C	PPR1	P07272	904 aa	Predicted RBP	6.88	□□□□□ -1.31
SIR2	YDL042C	GIP4	P39732	760 aa		6.88	□□□□□ -1.31
SIR2	YDL042C	MTD1	Q02046	320 aa	Known RBP	6.88	□□□□□ -1.31
SIR2	YDL042C	BCS1	P32839	456 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	STL1	P39932	569 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	YKL033W-A	Q86ZR7	236 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	PTP2	P29461	750 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	SFB3	P38810	929 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	FMP52	P40008	231 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	YIL092W	P40497	633 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	PAN2	P53010	1115 aa	Predicted RBP	6.87	□□□□□ -1.31
SIR2	YDL042C	KIN4	Q01919	800 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	YOL073C	Q08232	322 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	ZRT2	Q12436	422 aa		6.87	□□□□□ -1.31
SIR2	YDL042C	FEN2	P25621	512 aa	Known RBP	6.86	□□□□□ -1.31
SIR2	YDL042C	COS111	P38308	924 aa		6.86	□□□□□ -1.31
SIR2	YDL042C	PIG2	P40187	538 aa		6.86	□□□□□ -1.31
SIR2	YDL042C	YIL077C	P40508	320 aa		6.86	□□□□□ -1.31
SIR2	YDL042C	TAN1	P53072	289 aa	Predicted RBP	6.86	□□□□□ -1.31
SIR2	YDL042C	SPO1	P53541	631 aa		6.86	□□□□□ -1.31
SIR2	YDL042C	MLC2	Q06580	163 aa		6.86	□□□□□ -1.31
SIR2	YDL042C	HOP1	P20050	605 aa		6.85	□□□□□ -1.31
SIR2	YDL042C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.85	□□□□□ -1.31	not detected
SIR2	YDL042C	YFT2	Q06676	274 aa		6.85	□□□□□ -1.31
SIR2	YDL042C	NUR1	Q12066	484 aa		6.85	□□□□□ -1.31
SIR2	YDL042C	SSN2	P38931	1420 aa		6.84	□□□□□ -1.31
SIR2	YDL042C	PHO3	P24031	467 aa		6.84	□□□□□ -1.31
SIR2	YDL042C	PRM2	P40534	656 aa		6.84	□□□□□ -1.31
SIR2	YDL042C	ECM5	Q03214	1411 aa		6.84	□□□□□ -1.31
SIR2	YDL042C	SIR3	P06701	978 aa		6.84	□□□□□ -1.32
SIR2	YDL042C	PRP28	P23394	588 aa		6.84	□□□□□ -1.32
SIR2	YDL042C	MTC7	P32633	139 aa		6.84	□□□□□ -1.32
SIR2	YDL042C	PPS1	P38148	807 aa		6.84	□□□□□ -1.32
SIR2	YDL042C	SAW1	P39735	261 aa		6.84	□□□□□ -1.32
SIR2	YDL042C	AIM21	P40563	679 aa		6.84	□□□□□ -1.32
SIR2	YDL042C	SQS1	P53866	767 aa	Known RBP	6.84	□□□□□ -1.32
SIR2	YDL042C	PSF3	Q12146	194 aa		6.84	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 149.3 ms