RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSH1	YBR283C	KAR3	P17119	729 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	VMA4	P22203	233 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	PWP2	P25635	923 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	YUR1	P26725	428 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	CAP1	P28495	268 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	CDC11	P32458	415 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	GCD6	P32501	712 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	SUV3	P32580	737 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	VPS35	P34110	944 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	SET3	P36124	751 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	ECM2	P38241	364 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	FZO1	P38297	855 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	SUL1	P38359	859 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	PAN5	P38787	379 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	LIN1	P38852	340 aa	Predicted RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	PES4	P39684	611 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	GPB2	P39717	880 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	INA22	P40576	216 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	NBP1	P52919	319 aa	Predicted RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	GUP1	P53154	560 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	YGR125W	P53273	1036 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	CPR6	P53691	371 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	YNL011C	P53980	444 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	DOS2	P54858	310 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	UTP6	Q02354	440 aa	Known RBP	4.36	□□□□□ -1.71
SSH1	YBR283C	SHR3	Q02774	210 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	MFM1	Q02783	413 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	SHE9	Q04172	456 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	AIM33	Q04516	312 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	DFG5	Q05031	458 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	YLR297W	Q05899	129 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	YDL057W	Q07379	328 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	MED1	Q12321	566 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	OCA6	Q12454	224 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	ECM29	P38737	1868 aa		4.36	□□□□□ -1.71
SSH1	YBR283C	VPS13	Q07878	3144 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	CDC19	P00549	500 aa	Known RBP	4.35	□□□□□ -1.71
SSH1	YBR283C	POL3	P15436	1097 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	HEM15	P16622	393 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	TKL1	P23254	680 aa	Known RBP	4.35	□□□□□ -1.71
SSH1	YBR283C	SRO9	P25567	434 aa	Known RBP	4.35	□□□□□ -1.71
SSH1	YBR283C	GAR1	P28007	205 aa	Known RBP	4.35	□□□□□ -1.71
SSH1	YBR283C	PAH1	P32567	862 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	UGA4	P32837	571 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	BCS1	P32839	456 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	PPS1	P38148	807 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	HSM3	P38348	480 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	MGE1	P38523	228 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	KAP123	P40069	1113 aa	Known RBP	4.35	□□□□□ -1.71
SSH1	YBR283C	GPD2	P41911	440 aa	Known RBP	4.35	□□□□□ -1.71
SSH1	YBR283C	SUM1	P46676	1062 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	BRO1	P48582	844 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	VID30	P53076	958 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	HUL5	P53119	910 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	LIF1	P53150	421 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	ERP6	P53198	216 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	NNF2	P53253	936 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	YMR321C	Q04898	105 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	SVF1	Q05515	481 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	YOR131C	Q12486	218 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	ARP6	Q12509	438 aa		4.35	□□□□□ -1.71
SSH1	YBR283C	SNF1	P06782	633 aa	Known RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	YML002W	P0CF17	737 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	TFC4	P33339	1025 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	TRM2	P33753	639 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	YBL055C	P34220	418 aa	Predicted RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	UBP11	P36026	717 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	DBP7	P36120	742 aa	Known RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	YBR197C	P38306	217 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	TIF5	P38431	405 aa	Known RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	BEM4	P39011	633 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	GAA1	P39012	614 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	END3	P39013	349 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	AFG3	P39925	761 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	PSY2	P40164	858 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	GVP36	P40531	326 aa	Known RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	UBP6	P43593	499 aa	Known RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	YNL144C	P53907	740 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	ORC4	P54791	529 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	BET4	Q00618	327 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	INP2	Q03824	705 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	YDR278C	Q05612	105 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	WHI4	Q07655	649 aa	Known RBP	4.34	□□□□□ -1.71
SSH1	YBR283C	MET7	Q08645	548 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	SUT2	Q12286	268 aa		4.34	□□□□□ -1.71
SSH1	YBR283C	ILV1	P00927	576 aa	Known RBP	4.33	□□□□□ -1.72
SSH1	YBR283C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	RIP-Chip
SSH1	YBR283C	SNA3	P14359	133 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	TAL1	P15019	335 aa	Known RBP	4.33	□□□□□ -1.72
SSH1	YBR283C	PFK1	P16861	987 aa	Known RBP	4.33	□□□□□ -1.72
SSH1	YBR283C	CBF1	P17106	351 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	PWP1	P21304	576 aa	Known RBP	4.33	□□□□□ -1.72
SSH1	YBR283C	GSY1	P23337	708 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
SSH1	YBR283C	MLS1	P30952	554 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	SEC21	P32074	935 aa	Known RBP	4.33	□□□□□ -1.72
SSH1	YBR283C	SIN4	P32259	974 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	ISC10	P32645	267 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	RGT1	P32862	1170 aa		4.33	□□□□□ -1.72
SSH1	YBR283C	YKL050C	P35736	922 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 132.8 ms