RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS20, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS20	YBR254C	PHO5	P00635	467 aa		4.28	□□□□□ -1.72
TRS20	YBR254C	MSS1	P32559	526 aa	Predicted RBP	4.28	□□□□□ -1.72
TRS20	YBR254C	MET13	P53128	600 aa		4.28	□□□□□ -1.72
TRS20	YBR254C	GPD1	Q00055	391 aa	Known RBP	4.28	□□□□□ -1.72
TRS20	YBR254C	POB3	Q04636	552 aa	Known RBP	4.28	□□□□□ -1.72
TRS20	YBR254C	VHS3	Q08438	674 aa		4.28	□□□□□ -1.72
TRS20	YBR254C	RPA135	P22138	1203 aa	Known RBP	4.27	□□□□□ -1.73
TRS20	YBR254C	COS111	P38308	924 aa		4.27	□□□□□ -1.73
TRS20	YBR254C	BEM4	P39011	633 aa		4.27	□□□□□ -1.73
TRS20	YBR254C	BIT61	P47041	543 aa		4.27	□□□□□ -1.73
TRS20	YBR254C	YFT2	Q06676	274 aa		4.27	□□□□□ -1.73
TRS20	YBR254C	BMS1	Q08965	1183 aa	Known RBP	4.27	□□□□□ -1.73
TRS20	YBR254C	ERG20	P08524	352 aa	Known RBP	4.26	□□□□□ -1.73
TRS20	YBR254C	FRS1	P15624	595 aa	Known RBP	4.26	□□□□□ -1.73
TRS20	YBR254C	IMG2	P25642	146 aa	Predicted RBP	4.26	□□□□□ -1.73
TRS20	YBR254C	PMC1	P38929	1173 aa	Predicted RBP	4.26	□□□□□ -1.73
TRS20	YBR254C	OSW7	P43611	510 aa		4.26	□□□□□ -1.73
TRS20	YBR254C	ASN1	P49089	572 aa	Known RBP	4.26	□□□□□ -1.73
TRS20	YBR254C	TFB2	Q02939	513 aa		4.26	□□□□□ -1.73
TRS20	YBR254C	RIM13	Q03792	727 aa		4.26	□□□□□ -1.73
TRS20	YBR254C	YSH1	Q06224	779 aa	Predicted RBP	4.26	□□□□□ -1.73
TRS20	YBR254C	GUD1	Q07729	489 aa		4.26	□□□□□ -1.73
TRS20	YBR254C	RKI1	Q12189	258 aa		4.26	□□□□□ -1.73
TRS20	YBR254C	SAT4	P25333	603 aa	Known RBP	4.25	□□□□□ -1.73
TRS20	YBR254C	YMC1	P32331	307 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	PET127	P32606	800 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	APL3	P38065	1025 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	PMT6	P42934	759 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	DIP5	P53388	608 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	YNL193W	P53870	558 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	FMP30	Q02883	468 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	RCR2	Q03446	210 aa	Known RBP	4.25	□□□□□ -1.73
TRS20	YBR254C	SLK19	Q08581	821 aa	Known RBP	4.25	□□□□□ -1.73
TRS20	YBR254C	ICT1	Q12385	394 aa		4.25	□□□□□ -1.73
TRS20	YBR254C	ERG11	P10614	530 aa		4.24	□□□□□ -1.73
TRS20	YBR254C	SEC15	P22224	910 aa		4.24	□□□□□ -1.73
TRS20	YBR254C	SNF12	P53628	566 aa		4.24	□□□□□ -1.73
TRS20	YBR254C	YAP7	Q08182	245 aa		4.24	□□□□□ -1.73
TRS20	YBR254C	RPS9B	P05755	195 aa	Known RBP	4.23	□□□□□ -1.73
TRS20	YBR254C	KIN82	P25341	720 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	YKU70	P32807	602 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	UGP1	P32861	499 aa	Known RBP	4.23	□□□□□ -1.73
TRS20	YBR254C	ELF1	P36053	145 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	YKR075C	P36155	307 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	MAL31	P38156	614 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	SEG1	Q04279	960 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	VBA4	Q04602	768 aa	Known RBP	4.23	□□□□□ -1.73
TRS20	YBR254C	YLR407W	Q06070	228 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	IZH3	Q07959	543 aa		4.23	□□□□□ -1.73
TRS20	YBR254C	MDM20	Q12387	796 aa	Known RBP	4.23	□□□□□ -1.73
TRS20	YBR254C	ADE5,7	P07244	802 aa	Known RBP	4.22	□□□□□ -1.73
TRS20	YBR254C	IME1	P21190	360 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	NTH1	P32356	751 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	TMT1	P32643	299 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	YMR210W	Q03649	449 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	YDR179W-A	Q03983	463 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	HFD1	Q04458	532 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	UFO1	Q04511	668 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	YPS7	Q06325	596 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	YTA7	P40340	1379 aa		4.22	□□□□□ -1.73
TRS20	YBR254C	MGS1	P40151	587 aa		4.21	□□□□□ -1.74
TRS20	YBR254C	GLO1	P50107	326 aa		4.21	□□□□□ -1.74
TRS20	YBR254C	ULA1	Q12059	462 aa		4.21	□□□□□ -1.74
TRS20	YBR254C	TPK2	P06245	380 aa		4.2	□□□□□ -1.74
TRS20	YBR254C	NUP1	P20676	1076 aa		4.2	□□□□□ -1.74
TRS20	YBR254C	TAX4	P47030	604 aa		4.2	□□□□□ -1.74
TRS20	YBR254C	RPL8A	P17076	256 aa	Known RBP	4.19	□□□□□ -1.74
TRS20	YBR254C	STE4	P18851	423 aa		4.19	□□□□□ -1.74
TRS20	YBR254C	BUD8	P41698	603 aa		4.19	□□□□□ -1.74
TRS20	YBR254C	BNA3	P47039	444 aa	Known RBP	4.19	□□□□□ -1.74
TRS20	YBR254C	SDA1	P53313	767 aa	Known RBP	4.19	□□□□□ -1.74
TRS20	YBR254C	NGL2	Q03264	515 aa	Known RBP	4.19	□□□□□ -1.74
TRS20	YBR254C	PGK1	P00560	416 aa	Known RBP	4.18	□□□□□ -1.74
TRS20	YBR254C	RET2	P43621	546 aa		4.18	□□□□□ -1.74
TRS20	YBR254C	ALG12	P53730	551 aa		4.18	□□□□□ -1.74
TRS20	YBR254C	ARG7	Q04728	441 aa		4.18	□□□□□ -1.74
TRS20	YBR254C	FPR4	Q06205	392 aa	Predicted RBP	4.18	□□□□□ -1.74
TRS20	YBR254C	NOP14	Q99207	810 aa	Known RBP	4.18	□□□□□ -1.74
TRS20	YBR254C	SWI6	P09959	803 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	PRP22	P24384	1145 aa	Known RBP	4.17	□□□□□ -1.74
TRS20	YBR254C	TDA3	P38758	523 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	TMN3	P40071	706 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	XBP1	P40489	647 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	PXA1	P41909	870 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	BFA1	P47113	574 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	YJR096W	P47137	282 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	YGL117W	P53133	265 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	RNH70	P53331	553 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	TRS23	Q03784	219 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	STP4	Q07351	490 aa		4.17	□□□□□ -1.74
TRS20	YBR254C	APN1	P22936	367 aa		4.16	□□□□□ -1.74
TRS20	YBR254C	PTP1	P25044	335 aa		4.16	□□□□□ -1.74
TRS20	YBR254C	RRP14	P36080	434 aa	Known RBP	4.16	□□□□□ -1.74
TRS20	YBR254C	CKB2	P38930	258 aa		4.16	□□□□□ -1.74
TRS20	YBR254C	ORC1	P54784	914 aa	Predicted RBP	4.16	□□□□□ -1.74
TRS20	YBR254C	AAD3	P25612	363 aa		4.15	□□□□□ -1.75
TRS20	YBR254C	SFP1	P32432	683 aa		4.15	□□□□□ -1.75
TRS20	YBR254C	PPG1	P32838	368 aa		4.15	□□□□□ -1.75
TRS20	YBR254C	GAT1	P43574	510 aa		4.15	□□□□□ -1.75
TRS20	YBR254C	PIP2	P52960	996 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms