RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CFAP43Q8NDM7 1665 aa5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 PHLDB1Q86UU1 1377 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 A6NJR5 290 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 PRMT3O60678 531 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 TGFB1P01137 390 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 XRCC6P12956 609 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 CDC27P30260 824 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 CD68P34810 354 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 CD97P48960 835 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 CDCA8Q53HL2 280 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 COX20Q5RI15 118 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 UTP14CQ5TAP6 766 aaKnown RBP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 C16orf46Q6P387 395 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 NPM2Q86SE8 214 aaKnown RBP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 SMAP1Q8IYB5 467 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 FNBP4Q8N3X1 1017 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 PRIMPOLQ96LW4 560 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 ARXQ96QS3 562 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 KCNF1Q9H3M0 494 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 RCAN3Q9UKA8 241 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 KCNMB2Q9Y691 235 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 MYOM3Q5VTT5 1437 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 KDM2BQ8NHM5 1336 aa5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 AQRO60306 1485 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P50-201ENST00000605814 DHX29Q7Z478 1369 aaKnown RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 VIRMAQ69YN4 1812 aaKnown RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 MRE11P49959 708 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 GP2P55259 537 aaKnown RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 CABP4P57796 275 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 FKBP5Q13451 457 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 DUOXA2Q1HG44 320 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 UVSSAQ2YD98 709 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 CENPQQ7L2Z9 268 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 NCAPG2Q86XI2 1143 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 EXOC6Q8TAG9 804 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 NAP1L5Q96NT1 182 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 MKNK1Q9BUB5 465 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 CARD10Q9BWT7 1032 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 MIA2Q96PC5 1412 aa5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 COL17A1Q9UMD9 1497 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P50-201ENST00000605814 BRD4O60885 1362 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 ROCK2O75116 1388 aaKnown RBP5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 ZMYM3Q14202 1370 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 KIF27Q86VH2 1401 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 HOXD8P13378 290 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 YBX3P16989 372 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 ATP11AP98196 1134 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 PDE4CQ08493 712 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 NFIAQ12857 509 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 SWI5Q1ZZU3 235 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 INTS5Q6P9B9 1019 aaKnown RBP5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 Q6ZS46 218 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 PTPN23Q9H3S7 1636 aa5.18□□□□□ -1.58
HMGB1P50-201ENST00000605814 NAIPQ13075 1403 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 FMN1Q68DA7 1419 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 SCAPERQ9BY12 1400 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 GOLGA6L3A6NEY3 463 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 GAS2O43903 313 aaKnown RBP5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 PTPRAP18433 802 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 BECN1Q14457 450 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 RALBP1Q15311 655 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 C8orf34Q49A92 452 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 FDX2Q6P4F2 183 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 ETFBKMTQ8IXQ9 262 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 KLHL23Q8NBE8 558 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 GALNT11Q8NCW6 608 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 TTC16Q8NEE8 873 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 OR13H1Q8NG92 308 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 GIMAP7Q8NHV1 300 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 UBL7Q96S82 380 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 ANTXR1Q9H6X2 564 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 RNF114Q9Y508 228 aa5.17□□□□□ -1.58
HMGB1P50-201ENST00000605814 KIAA1324LA8MWY0 1029 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 FSCN2O14926 492 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 OFD1O75665 1012 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 WISP1O95388 367 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 TAL1P17542 331 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 ZAP70P43403 619 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 HS1BP3Q53T59 392 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 TRIM42Q8IWZ5 723 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 ABTB2Q8N961 1025 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 GPR152Q8TDT2 470 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 DBNDD2Q9BQY9 259 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 RASSF4Q9H2L5 321 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 C7orf69Q9H7B7 122 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 SEC31BQ9NQW1 1179 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 ABI2Q9NYB9 513 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 POGKQ9P215 609 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 KIF7Q2M1P5 1343 aa5.16□□□□□ -1.58
HMGB1P50-201ENST00000605814 HECW1Q76N89 1606 aa5.15□□□□□ -1.58
HMGB1P50-201ENST00000605814 HMX2A2RU54 273 aa5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 ARL4DP49703 201 aa5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 NAA30Q147X3 362 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 RNF43Q68DV7 783 aa5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 SLC7A3Q8WY07 619 aa5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 MYRFLQ96LU7 910 aa5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 PPP1R9BQ96SB3 815 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms