RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZYXQ15942 572 aaKnown RBP17.8■□□□□ 0.44
LSS-202ENST00000397728 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 TTLL5Q6EMB2 1281 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 MAPKAPK5Q8IW41 473 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 ALG1Q9BT22 464 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 LIG1P18858 919 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 SMARCC2Q8TAQ2 1214 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 ATG3Q9NT62 314 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 KBTBD3Q8NAB2 608 aa17.8■□□□□ 0.44
LSS-202ENST00000397728 BCAMP50895 628 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 VSIG10Q8N0Z9 540 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 RIMS1Q86UR5 1692 aaKnown RBP17.79■□□□□ 0.44
LSS-202ENST00000397728 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 UBA7P41226 1012 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
LSS-202ENST00000397728 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 RXRAP19793 462 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 CAMK4Q16566 473 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 TEKT1Q969V4 418 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 SH2D4AQ9H788 454 aa17.79■□□□□ 0.44
LSS-202ENST00000397728 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 RAD50Q92878 1312 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 STX6O43752 255 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 KIDINS220Q9ULH0 1771 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
LSS-202ENST00000397728 ADAMTS13Q76LX8 1427 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 IDEP14735 1019 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 SCNN1DP51172 638 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 NLRP10Q86W26 655 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 SEC31BQ9NQW1 1179 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 ZNF532Q9HCE3 1301 aa17.78■□□□□ 0.44
LSS-202ENST00000397728 CALM1P0DP23 149 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 CALM2P0DP24 149 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 CALM3P0DP25 149 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 ANAPC15P60006 121 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 TGFBRAP1Q8WUH2 860 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 VTI1AQ96AJ9 217 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 EDC3Q96F86 508 aaKnown RBP17.77■□□□□ 0.44
LSS-202ENST00000397728 ABCC4O15439 1325 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 CRB1P82279 1406 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 CPSF1Q10570 1443 aaKnown RBP17.77■□□□□ 0.44
LSS-202ENST00000397728 B4E1Z4 1266 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 TXNRD1Q16881 649 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 KLHL10Q6JEL2 608 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 CCDC70Q6NSX1 233 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 FAM227BQ96M60 508 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
LSS-202ENST00000397728 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.43
LSS-202ENST00000397728 VPS72Q15906 364 aa17.77■□□□□ 0.43
LSS-202ENST00000397728 ZNF804BA4D1E1 1349 aa17.77■□□□□ 0.43
LSS-202ENST00000397728 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 APOBRQ0VD83 1088 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 DHX32Q7L7V1 743 aaKnown RBP17.76■□□□□ 0.43
LSS-202ENST00000397728 CKAP2LQ8IYA6 745 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 SSH3Q8TE77 659 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 RRP36Q96EU6 259 aaKnown RBP17.76■□□□□ 0.43
LSS-202ENST00000397728 PUS3Q9BZE2 481 aaKnown RBP17.76■□□□□ 0.43
LSS-202ENST00000397728 SSFA2P28290 1259 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 SMARCE1Q969G3 411 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 HOOK2Q96ED9 719 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 CALML4Q96GE6 196 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 RTL9Q8NET4 1388 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 PAF1Q8N7H5 531 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 TMOD4Q9NZQ9 345 aa17.76■□□□□ 0.43
LSS-202ENST00000397728 CERS3Q8IU89 383 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 GDPD2Q9HCC8 539 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 ZNHIT6Q9NWK9 470 aaKnown RBP17.75■□□□□ 0.43
LSS-202ENST00000397728 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 MCM4P33991 863 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
LSS-202ENST00000397728 BBOX1O75936 387 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 ARID3AQ99856 593 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 ARHGEF10LQ9HCE6 1279 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 XDHP47989 1333 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 GPCPD1Q9NPB8 672 aa17.75■□□□□ 0.43
LSS-202ENST00000397728 PDE8BO95263 885 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 PPP1R12BO60237 982 aaPredicted RBP17.74■□□□□ 0.43
LSS-202ENST00000397728 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
LSS-202ENST00000397728 OVOS2A0A0G2JMS6 1433 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 OVOS2A0A0J9YW53 1432 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 OVOS2Q6IE36 1432 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 MAP3K11Q16584 847 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 C6orf50Q9HD87 102 aa17.74■□□□□ 0.43
LSS-202ENST00000397728 PARP1P09874 1014 aaKnown RBP17.73■□□□□ 0.43
LSS-202ENST00000397728 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 PPFIBP1Q86W92 1011 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 FSIP1Q8NA03 581 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 PIK3C2BO00750 1634 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 B4DLN1 442 aa17.73■□□□□ 0.43
LSS-202ENST00000397728 MRPL12P52815 198 aaKnown RBP17.73■□□□□ 0.43
LSS-202ENST00000397728 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
LSS-202ENST00000397728 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms