RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W IFA38P38286 347 aa7.22□□□□□ -1.25
CIT3YPR001W SWD1P39706 426 aa7.22□□□□□ -1.25
CIT3YPR001W RRT6P53117 311 aaPredicted RBP7.22□□□□□ -1.25
CIT3YPR001W MTD1Q02046 320 aaKnown RBP7.22□□□□□ -1.25
CIT3YPR001W EAR1Q03212 550 aa7.22□□□□□ -1.25
CIT3YPR001W LRS4Q04087 347 aaKnown RBP7.22□□□□□ -1.25
CIT3YPR001W CSR1Q06705 408 aaKnown RBP7.22□□□□□ -1.25
CIT3YPR001W AVO1Q08236 1176 aa7.22□□□□□ -1.25
CIT3YPR001W YPL277CQ08989 487 aa7.22□□□□□ -1.25
CIT3YPR001W PGA3Q12746 312 aaKnown RBP7.22□□□□□ -1.25
CIT3YPR001W PFK2P16862 959 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
CIT3YPR001W SGF29P25554 259 aa7.21□□□□□ -1.26
CIT3YPR001W YCL002CP25565 263 aa7.21□□□□□ -1.26
CIT3YPR001W KHA1P40309 873 aa7.21□□□□□ -1.26
CIT3YPR001W IMA5P40884 581 aa7.21□□□□□ -1.26
CIT3YPR001W ARF3P40994 183 aaRIP-Chip data7.21□□□□□ -1.26not detected
CIT3YPR001W LEM3P42838 414 aa7.21□□□□□ -1.26
CIT3YPR001W YFL052WP43551 465 aa7.21□□□□□ -1.26
CIT3YPR001W IRC5P43610 853 aa7.21□□□□□ -1.26
CIT3YPR001W MSB3P48566 633 aaPredicted RBP7.21□□□□□ -1.26
CIT3YPR001W YGR250CP53316 781 aaKnown RBP7.21□□□□□ -1.26
CIT3YPR001W NGL1Q08213 363 aaKnown RBP7.21□□□□□ -1.26
CIT3YPR001W VAS1P07806 1104 aaKnown RBP7.2□□□□□ -1.26
CIT3YPR001W PMS1P14242 873 aa7.2□□□□□ -1.26
CIT3YPR001W CLB4P24871 460 aa7.2□□□□□ -1.26
CIT3YPR001W HXT4P32467 576 aa7.2□□□□□ -1.26
CIT3YPR001W STE13P33894 931 aa7.2□□□□□ -1.26
CIT3YPR001W YKR018CP36114 725 aa7.2□□□□□ -1.26
CIT3YPR001W TAF5P38129 798 aa7.2□□□□□ -1.26
CIT3YPR001W NPR2P39923 615 aa7.2□□□□□ -1.26
CIT3YPR001W VID28P40547 921 aa7.2□□□□□ -1.26
CIT3YPR001W SHR5P41912 237 aa7.2□□□□□ -1.26
CIT3YPR001W SAE2P46946 345 aa7.2□□□□□ -1.26
CIT3YPR001W ARE2P53629 642 aaKnown RBP7.2□□□□□ -1.26
CIT3YPR001W YNL058CP53947 316 aa7.2□□□□□ -1.26
CIT3YPR001W YMR155WQ03795 547 aa7.2□□□□□ -1.26
CIT3YPR001W RSA3Q05942 220 aaKnown RBP7.2□□□□□ -1.26
CIT3YPR001W MET32Q12041 191 aa7.2□□□□□ -1.26
CIT3YPR001W SMF3Q12078 473 aaPredicted RBP7.2□□□□□ -1.26
CIT3YPR001W DBP10Q12389 995 aaKnown RBP7.2□□□□□ -1.26
CIT3YPR001W MRP10O75012 95 aa7.19□□□□□ -1.26
CIT3YPR001W MIS1P09440 975 aaKnown RBP7.19□□□□□ -1.26
CIT3YPR001W GLN4P13188 809 aaKnown RBP7.19□□□□□ -1.26
CIT3YPR001W OLE1P21147 510 aaKnown RBP7.19□□□□□ -1.26
CIT3YPR001W ERG3P32353 365 aa7.19□□□□□ -1.26
CIT3YPR001W UGA2P38067 497 aa7.19□□□□□ -1.26
CIT3YPR001W PRE3P38624 215 aa7.19□□□□□ -1.26
CIT3YPR001W RRF1P38771 230 aa7.19□□□□□ -1.26
CIT3YPR001W STT3P39007 718 aaKnown RBP7.19□□□□□ -1.26
CIT3YPR001W GPB2P39717 880 aa7.19□□□□□ -1.26
CIT3YPR001W RPN3P40016 523 aaKnown RBP7.19□□□□□ -1.26
CIT3YPR001W LYS14P40971 790 aa7.19□□□□□ -1.26
CIT3YPR001W VPS9P54787 451 aa7.19□□□□□ -1.26
CIT3YPR001W CRR1Q05790 422 aa7.19□□□□□ -1.26
CIT3YPR001W CDC26P14724 124 aa7.18□□□□□ -1.26
CIT3YPR001W UTP9P38882 575 aaKnown RBP7.18□□□□□ -1.26
CIT3YPR001W ROG3P43602 733 aa7.18□□□□□ -1.26
CIT3YPR001W SNO4Q04902 237 aa7.18□□□□□ -1.26
CIT3YPR001W HSP33Q08914 237 aaKnown RBP7.18□□□□□ -1.26
CIT3YPR001W HSP32Q08992 237 aa7.18□□□□□ -1.26
CIT3YPR001W ALG6Q12001 544 aaKnown RBP7.18□□□□□ -1.26
CIT3YPR001W NSI1Q12457 570 aa7.18□□□□□ -1.26
CIT3YPR001W STF1P01098 86 aa7.17□□□□□ -1.26
CIT3YPR001W CBP3P21560 335 aa7.17□□□□□ -1.26
CIT3YPR001W RFA1P22336 621 aaKnown RBP7.17□□□□□ -1.26
CIT3YPR001W SAP190P36123 1033 aa7.17□□□□□ -1.26
CIT3YPR001W YKR075CP36155 307 aa7.17□□□□□ -1.26
CIT3YPR001W MRPL36P36531 177 aa7.17□□□□□ -1.26
CIT3YPR001W NPR3P38742 1146 aa7.17□□□□□ -1.26
CIT3YPR001W GIC1P38785 314 aa7.17□□□□□ -1.26
CIT3YPR001W SET5P38890 526 aaKnown RBP7.17□□□□□ -1.26
CIT3YPR001W NPP2P39997 493 aa7.17□□□□□ -1.26
CIT3YPR001W MAM1P40065 302 aa7.17□□□□□ -1.26
CIT3YPR001W UBP7P40453 1071 aa7.17□□□□□ -1.26
CIT3YPR001W YJR039WP47107 1121 aa7.17□□□□□ -1.26
CIT3YPR001W GRX3Q03835 250 aa7.17□□□□□ -1.26
CIT3YPR001W ISA2Q12425 185 aa7.17□□□□□ -1.26
CIT3YPR001W Q0142Q9ZZW4 58 aa7.17□□□□□ -1.26
CIT3YPR001W MET17P06106 444 aa7.17□□□□□ -1.26
CIT3YPR001W SAC6P32599 642 aaKnown RBP7.17□□□□□ -1.26
CIT3YPR001W SSP120P39931 234 aaKnown RBP7.17□□□□□ -1.26
CIT3YPR001W YJL068CP40363 299 aa7.17□□□□□ -1.26
CIT3YPR001W OCA1P50946 238 aaPredicted RBP7.17□□□□□ -1.26
CIT3YPR001W YGR045CP53229 120 aa7.17□□□□□ -1.26
CIT3YPR001W ZDS2P54786 942 aa7.17□□□□□ -1.26
CIT3YPR001W SSL2Q00578 843 aa7.17□□□□□ -1.26
CIT3YPR001W SRT1Q03175 343 aa7.17□□□□□ -1.26
CIT3YPR001W INO80P53115 1489 aa7.16□□□□□ -1.26
CIT3YPR001W GCN4P03069 281 aa7.16□□□□□ -1.26
CIT3YPR001W YEL076C-AP0CX16 216 aa7.16□□□□□ -1.26
CIT3YPR001W YLR464WP0CX17 216 aa7.16□□□□□ -1.26
CIT3YPR001W POL3P15436 1097 aa7.16□□□□□ -1.26
CIT3YPR001W VMA2P16140 517 aaKnown RBP7.16□□□□□ -1.26
CIT3YPR001W BET2P20133 325 aa7.16□□□□□ -1.26
CIT3YPR001W KNS1P32350 737 aaPredicted RBP7.16□□□□□ -1.26
CIT3YPR001W TEF4P36008 412 aaKnown RBP7.16□□□□□ -1.26
CIT3YPR001W YEL076CP39971 216 aa7.16□□□□□ -1.26
CIT3YPR001W YJR098CP47139 656 aa7.16□□□□□ -1.26
CIT3YPR001W BSC5P53755 489 aa7.16□□□□□ -1.26
CIT3YPR001W NOP15P53927 220 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms