RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	DAL2	P25335	343 aa		11.33	□□□□□ -0.6
PEX25	YPL112C	PEX34	P25584	144 aa		11.33	□□□□□ -0.6
PEX25	YPL112C	LEO1	P38439	464 aa		11.33	□□□□□ -0.6
PEX25	YPL112C	NSE5	Q03718	556 aa		11.33	□□□□□ -0.6
PEX25	YPL112C	PML39	Q03760	334 aa		11.33	□□□□□ -0.6
PEX25	YPL112C	YDR344C	Q05510	147 aa		11.33	□□□□□ -0.6
PEX25	YPL112C	CCH1	P50077	2039 aa		11.32	□□□□□ -0.6
PEX25	YPL112C	RPS6A	P0CX37	236 aa	Known RBP	11.32	□□□□□ -0.6
PEX25	YPL112C	RPS6B	P0CX38	236 aa	Predicted RBP	11.32	□□□□□ -0.6
PEX25	YPL112C	SCJ1	P25303	377 aa		11.32	□□□□□ -0.6
PEX25	YPL112C	NIP100	P33420	868 aa		11.32	□□□□□ -0.6
PEX25	YPL112C	DSE1	P40077	573 aa		11.32	□□□□□ -0.6
PEX25	YPL112C	DRN1	P53255	507 aa	Known RBP	11.32	□□□□□ -0.6
PEX25	YPL112C	LEE1	Q02799	301 aa	Known RBP	11.32	□□□□□ -0.6
PEX25	YPL112C	YML082W	Q04533	649 aa	Known RBP	11.32	□□□□□ -0.6
PEX25	YPL112C	SPE3	Q12074	293 aa	Known RBP	11.32	□□□□□ -0.6
PEX25	YPL112C	RAM1	P22007	431 aa		11.31	□□□□□ -0.6
PEX25	YPL112C	MSH3	P25336	1018 aa		11.31	□□□□□ -0.6
PEX25	YPL112C	PUP3	P25451	205 aa	Known RBP	11.31	□□□□□ -0.6
PEX25	YPL112C	LRE1	P25579	583 aa	Known RBP	11.31	□□□□□ -0.6
PEX25	YPL112C	MET4	P32389	672 aa		11.31	□□□□□ -0.6
PEX25	YPL112C	CSG2	P35206	410 aa		11.31	□□□□□ -0.6
PEX25	YPL112C	SFB3	P38810	929 aa		11.31	□□□□□ -0.6
PEX25	YPL112C	UTP8	P53276	713 aa	Known RBP	11.31	□□□□□ -0.6
PEX25	YPL112C	ROX1	P25042	368 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	SEC65	P29478	273 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	YKL097C	P34245	136 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	SAP190	P36123	1033 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	SHM1	P37292	490 aa	Predicted RBP	11.3	□□□□□ -0.6
PEX25	YPL112C	NOP4	P37838	685 aa	Known RBP	11.3	□□□□□ -0.6
PEX25	YPL112C	DYS1	P38791	387 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	SHQ1	P40486	507 aa	Predicted RBP	11.3	□□□□□ -0.6
PEX25	YPL112C	SDS3	P40505	327 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	LSB6	P42951	607 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	YPR078C	Q06813	372 aa		11.3	□□□□□ -0.6
PEX25	YPL112C	YKR051W	P36142	418 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	DUG2	P38149	878 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	RKM3	P38222	552 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	RAD55	P38953	406 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	PSP1	P50896	841 aa	Known RBP	11.29	□□□□□ -0.6
PEX25	YPL112C	YGL036W	P53185	909 aa	Predicted RBP	11.29	□□□□□ -0.6
PEX25	YPL112C	ESBP6	P53918	673 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	IRC10	Q08118	586 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	SAM3	Q08986	587 aa		11.29	□□□□□ -0.6
PEX25	YPL112C	CDC33	P07260	213 aa	Known RBP	11.28	□□□□□ -0.6
PEX25	YPL112C	RAD16	P31244	790 aa		11.28	□□□□□ -0.6
PEX25	YPL112C	BTT1	P40314	149 aa	Predicted RBP	11.28	□□□□□ -0.6
PEX25	YPL112C	IES1	P43579	692 aa		11.28	□□□□□ -0.6
PEX25	YPL112C	HFM1	P51979	1187 aa		11.28	□□□□□ -0.6
PEX25	YPL112C	DDC1	Q08949	612 aa		11.28	□□□□□ -0.6
PEX25	YPL112C	NBP2	Q12163	236 aa		11.28	□□□□□ -0.6
PEX25	YPL112C	MRM1	P25270	412 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	SMC1	P32908	1225 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	MRPL10	P36520	322 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	GUF1	P46943	645 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	VPS70	P47161	811 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	MND1	P53102	219 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	GPD1	Q00055	391 aa	Known RBP	11.27	□□□□□ -0.61
PEX25	YPL112C	TRE1	Q08919	783 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	YPQ1	Q12010	308 aa		11.27	□□□□□ -0.61
PEX25	YPL112C	TSA1	P34760	196 aa	Known RBP	11.26	□□□□□ -0.61
PEX25	YPL112C	TRZ1	P36159	838 aa	Predicted RBP	11.26	□□□□□ -0.61
PEX25	YPL112C	YMC2	P38087	329 aa		11.26	□□□□□ -0.61
PEX25	YPL112C	RPT2	P40327	437 aa	Known RBP	11.26	□□□□□ -0.61
PEX25	YPL112C	TFG2	P41896	400 aa	Predicted RBP	11.26	□□□□□ -0.61
PEX25	YPL112C	RSC1	P53236	928 aa		11.26	□□□□□ -0.61
PEX25	YPL112C	CEG1	Q01159	459 aa	Predicted RBP	11.26	□□□□□ -0.61
PEX25	YPL112C	MTD1	Q02046	320 aa	Known RBP	11.26	□□□□□ -0.61
PEX25	YPL112C	GCN5	Q03330	439 aa		11.26	□□□□□ -0.61
PEX25	YPL112C	NDJ1	Q12366	352 aa		11.26	□□□□□ -0.61
PEX25	YPL112C	PPR1	P07272	904 aa	Predicted RBP	11.25	□□□□□ -0.61
PEX25	YPL112C	YER152C	P10356	443 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	MTF1	P14908	341 aa	Known RBP	11.25	□□□□□ -0.61
PEX25	YPL112C	TUP1	P16649	713 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	SGF29	P25554	259 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	DAL1	P32375	460 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	CBR1	P38626	284 aa	Known RBP	11.25	□□□□□ -0.61
PEX25	YPL112C	VFA1	P40080	203 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	YTA12	P40341	825 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	PFD1	P46988	109 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	ASG7	P46993	209 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	TAD1	P53065	400 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	ARO80	Q04052	950 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	YLR287C	Q05881	355 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	MDM38	Q08179	573 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	VPS54	Q12071	889 aa		11.25	□□□□□ -0.61
PEX25	YPL112C	JIP3	O13555	125 aa		11.24	□□□□□ -0.61
PEX25	YPL112C	AVT2	P39981	480 aa		11.24	□□□□□ -0.61
PEX25	YPL112C	ART5	P53244	586 aa	Known RBP	11.24	□□□□□ -0.61
PEX25	YPL112C	YHM2	Q04013	314 aa		11.24	□□□□□ -0.61
PEX25	YPL112C	ECM22	Q05958	814 aa	Predicted RBP	11.24	□□□□□ -0.61
PEX25	YPL112C	BSP1	Q06604	576 aa		11.24	□□□□□ -0.61
PEX25	YPL112C	RCL1	Q08096	367 aa	Predicted RBP	11.24	□□□□□ -0.61
PEX25	YPL112C	YOL098C	Q12496	1037 aa		11.24	□□□□□ -0.61
PEX25	YPL112C	RPS3	P05750	240 aa	Known RBP	11.23	□□□□□ -0.61
PEX25	YPL112C	SIR1	P21691	654 aa		11.23	□□□□□ -0.61
PEX25	YPL112C	STE11	P23561	717 aa		11.23	□□□□□ -0.61
PEX25	YPL112C	DSS4	P32601	143 aa		11.23	□□□□□ -0.61
PEX25	YPL112C	YBL036C	P38197	257 aa		11.23	□□□□□ -0.61
PEX25	YPL112C	FHL1	P39521	936 aa		11.23	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms