RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W ORC4P54791 529 aa4.31□□□□□ -1.72
CHL1YPL008W YLR297WQ05899 129 aa4.31□□□□□ -1.72
CHL1YPL008W YOR131CQ12486 218 aa4.31□□□□□ -1.72
CHL1YPL008W SRF1Q12516 437 aa4.31□□□□□ -1.72
CHL1YPL008W TRP2P00899 507 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W CBP1P07252 654 aa4.3□□□□□ -1.72
CHL1YPL008W CLN3P13365 580 aa4.3□□□□□ -1.72
CHL1YPL008W GAL11P19659 1081 aa4.3□□□□□ -1.72
CHL1YPL008W PRP22P24384 1145 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W UBC6P33296 250 aaPredicted RBP4.3□□□□□ -1.72
CHL1YPL008W VBA5P36172 582 aa4.3□□□□□ -1.72
CHL1YPL008W APM2P38700 605 aa4.3□□□□□ -1.72
CHL1YPL008W KEL1P38853 1164 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W ACA1P39970 489 aa4.3□□□□□ -1.72
CHL1YPL008W RPN3P40016 523 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W HMF1P40037 129 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W QDR2P40474 542 aa4.3□□□□□ -1.72
CHL1YPL008W NUT1P53114 1132 aa4.3□□□□□ -1.72
CHL1YPL008W MRS2Q01926 470 aa4.3□□□□□ -1.72
CHL1YPL008W MSH6Q03834 1242 aa4.3□□□□□ -1.72
CHL1YPL008W DON1Q05610 365 aa4.3□□□□□ -1.72
CHL1YPL008W OMS1Q06668 471 aa4.3□□□□□ -1.72
CHL1YPL008W RUD3Q12234 484 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W Q0182Q9ZZW1 134 aa4.3□□□□□ -1.72
CHL1YPL008W THS1P04801 734 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W TOM70P07213 617 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W RAD18P10862 487 aa4.3□□□□□ -1.72
CHL1YPL008W SMC1P32908 1225 aa4.3□□□□□ -1.72
CHL1YPL008W RPC25P35718 212 aa4.3□□□□□ -1.72
CHL1YPL008W OCT1P35999 772 aa4.3□□□□□ -1.72
CHL1YPL008W JNM1P36224 373 aa4.3□□□□□ -1.72
CHL1YPL008W PHO88P38264 188 aaPredicted RBP4.3□□□□□ -1.72
CHL1YPL008W SSN3P39073 555 aa4.3□□□□□ -1.72
CHL1YPL008W YMR124WP39523 943 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W GPD2P41911 440 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W SUM1P46676 1062 aa4.3□□□□□ -1.72
CHL1YPL008W NBP1P52919 319 aaPredicted RBP4.3□□□□□ -1.72
CHL1YPL008W YGR125WP53273 1036 aa4.3□□□□□ -1.72
CHL1YPL008W COG6P53959 839 aa4.3□□□□□ -1.72
CHL1YPL008W RPL22BP56628 122 aaKnown RBP4.3□□□□□ -1.72
CHL1YPL008W VTI1Q04338 217 aa4.3□□□□□ -1.72
CHL1YPL008W YMR018WQ04364 514 aa4.3□□□□□ -1.72
CHL1YPL008W CWC2Q12046 339 aaPredicted RBP4.3□□□□□ -1.72
CHL1YPL008W ARP6Q12509 438 aa4.3□□□□□ -1.72
CHL1YPL008W CSR2Q12734 1121 aa4.3□□□□□ -1.72
CHL1YPL008W TOP3P13099 656 aa4.29□□□□□ -1.72
CHL1YPL008W BAS1P22035 811 aa4.29□□□□□ -1.72
CHL1YPL008W NPR1P22211 790 aa4.29□□□□□ -1.72
CHL1YPL008W MRT4P33201 236 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W BLI1P35727 113 aa4.29□□□□□ -1.72
CHL1YPL008W IRS4P36115 615 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W PIH1P38768 344 aa4.29□□□□□ -1.72
CHL1YPL008W FIS1P40515 155 aa4.29□□□□□ -1.72
CHL1YPL008W JJJ1P53863 590 aa4.29□□□□□ -1.72
CHL1YPL008W YNL034WP53963 612 aa4.29□□□□□ -1.72
CHL1YPL008W YNL018CP53976 612 aa4.29□□□□□ -1.72
CHL1YPL008W TLG1Q03322 224 aa4.29□□□□□ -1.72
CHL1YPL008W YML037CQ03703 340 aa4.29□□□□□ -1.72
CHL1YPL008W RRB1Q04225 511 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W SPH1Q06160 661 aa4.29□□□□□ -1.72
CHL1YPL008W YOL075CQ08234 1294 aa4.29□□□□□ -1.72
CHL1YPL008W RTT10Q08924 1013 aa4.29□□□□□ -1.72
CHL1YPL008W OXR1Q08952 273 aa4.29□□□□□ -1.72
CHL1YPL008W HPR1P17629 752 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W TRX2P22803 104 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W SPT16P32558 1035 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W GCG1P32656 232 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W YSC83P32792 385 aa4.29□□□□□ -1.72
CHL1YPL008W SCD5P34758 872 aa4.29□□□□□ -1.72
CHL1YPL008W SMF1P38925 575 aa4.29□□□□□ -1.72
CHL1YPL008W SAK1P38990 1142 aa4.29□□□□□ -1.72
CHL1YPL008W SHE10P53075 577 aa4.29□□□□□ -1.72
CHL1YPL008W MON1P53129 644 aa4.29□□□□□ -1.72
CHL1YPL008W NCS2P53923 493 aaPredicted RBP4.29□□□□□ -1.72
CHL1YPL008W SOV1Q04748 898 aa4.29□□□□□ -1.72
CHL1YPL008W SUE1Q06524 206 aa4.29□□□□□ -1.72
CHL1YPL008W YDL129WQ07555 291 aa4.29□□□□□ -1.72
CHL1YPL008W ISA1Q07821 250 aaPredicted RBP4.29□□□□□ -1.72
CHL1YPL008W APL5Q08951 932 aaKnown RBP4.29□□□□□ -1.72
CHL1YPL008W YKL068W-AQ3E826 78 aa4.29□□□□□ -1.72
CHL1YPL008W RPB2P08518 1224 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W DBP5P20449 482 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W HBS1P32769 611 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W XRS2P33301 854 aa4.28□□□□□ -1.72
CHL1YPL008W TGL1P34163 548 aa4.28□□□□□ -1.72
CHL1YPL008W RCK2P38623 610 aa4.28□□□□□ -1.72
CHL1YPL008W TY4A-JP47023 414 aa4.28□□□□□ -1.72
CHL1YPL008W RPC17P47076 161 aa4.28□□□□□ -1.72
CHL1YPL008W KAP114P53067 1004 aa4.28□□□□□ -1.72
CHL1YPL008W PTA1Q01329 785 aaPredicted RBP4.28□□□□□ -1.72
CHL1YPL008W SND1Q04007 877 aa4.28□□□□□ -1.72
CHL1YPL008W UTP14Q04500 899 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W CSR1Q06705 408 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W MLH2Q07980 695 aa4.28□□□□□ -1.72
CHL1YPL008W SMC5Q08204 1093 aa4.28□□□□□ -1.72
CHL1YPL008W FAL1Q12099 399 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W RMP1Q12530 201 aa4.28□□□□□ -1.72
CHL1YPL008W CDC19P00549 500 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W AGP1P25376 633 aa4.28□□□□□ -1.72
CHL1YPL008W ATG19P35193 415 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms