RNA–Protein interactions for RNA: YOR188W

MSB1, Transcript of Protein of unknown function, yeastyeast

Gene MSB1, Length 3,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB1YOR188W GAL10P04397 699 aa2.53□□□□□ -2
MSB1YOR188W TIF1P10081 395 aaKnown RBP2.53□□□□□ -2
MSB1YOR188W PRP9P19736 530 aaKnown RBP2.53□□□□□ -2
MSB1YOR188W SDH2P21801 266 aa2.53□□□□□ -2
MSB1YOR188W PUF4P25339 888 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
MSB1YOR188W AGP2P38090 596 aa2.53□□□□□ -2
MSB1YOR188W YBR284WP38150 797 aa2.53□□□□□ -2
MSB1YOR188W SLX1P38324 304 aa2.53□□□□□ -2
MSB1YOR188W HIS2P38635 335 aa2.53□□□□□ -2
MSB1YOR188W END3P39013 349 aa2.53□□□□□ -2
MSB1YOR188W CCT4P39078 528 aaKnown RBP2.53□□□□□ -2
MSB1YOR188W DSE1P40077 573 aa2.53□□□□□ -2
MSB1YOR188W MVP1P40959 511 aaKnown RBP2.53□□□□□ -2
MSB1YOR188W YNL320WP42840 284 aa2.53□□□□□ -2
MSB1YOR188W LAM5P43560 674 aa2.53□□□□□ -2
MSB1YOR188W YJL045WP47052 634 aa2.53□□□□□ -2
MSB1YOR188W YGL036WP53185 909 aaPredicted RBP2.53□□□□□ -2
MSB1YOR188W TPO2P53283 614 aa2.53□□□□□ -2
MSB1YOR188W TBF1Q02457 562 aa2.53□□□□□ -2
MSB1YOR188W EEB1Q02891 456 aa2.53□□□□□ -2
MSB1YOR188W ATG16Q03818 150 aa2.53□□□□□ -2
MSB1YOR188W YMR114CQ04471 368 aaKnown RBP2.53□□□□□ -2
MSB1YOR188W YLR462WO13556 202 aa2.52□□□□□ -2.01
MSB1YOR188W YER152CP10356 443 aa2.52□□□□□ -2.01
MSB1YOR188W PYC1P11154 1178 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W CNS1P33313 385 aa2.52□□□□□ -2.01
MSB1YOR188W DRE2P36152 348 aa2.52□□□□□ -2.01
MSB1YOR188W RRT2P38332 387 aa2.52□□□□□ -2.01
MSB1YOR188W YHL049CP38722 271 aa2.52□□□□□ -2.01
MSB1YOR188W YEL075CP39972 122 aa2.52□□□□□ -2.01
MSB1YOR188W KAP123P40069 1113 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W YER189WP40104 122 aa2.52□□□□□ -2.01
MSB1YOR188W TMA108P40462 946 aa2.52□□□□□ -2.01
MSB1YOR188W YFL064CP43540 174 aa2.52□□□□□ -2.01
MSB1YOR188W MIC19P43594 170 aa2.52□□□□□ -2.01
MSB1YOR188W GCV2P49095 1034 aa2.52□□□□□ -2.01
MSB1YOR188W PRP31P49704 494 aaPredicted RBP2.52□□□□□ -2.01
MSB1YOR188W ALT1P52893 592 aa2.52□□□□□ -2.01
MSB1YOR188W DRN1P53255 507 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W CWC22P53333 577 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W ALG11P53954 548 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W MTG1Q03151 367 aaPredicted RBP2.52□□□□□ -2.01
MSB1YOR188W UFO1Q04511 668 aa2.52□□□□□ -2.01
MSB1YOR188W OSH2Q12451 1283 aa2.52□□□□□ -2.01
MSB1YOR188W NOP58Q12499 511 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W YBL111CQ3E7Y5 667 aa2.52□□□□□ -2.01
MSB1YOR188W HEM1P09950 548 aaPredicted RBP2.52□□□□□ -2.01
MSB1YOR188W FUB1P25659 250 aa2.52□□□□□ -2.01
MSB1YOR188W PAH1P32567 862 aa2.52□□□□□ -2.01
MSB1YOR188W ABD1P32783 436 aaPredicted RBP2.52□□□□□ -2.01
MSB1YOR188W BCK2P33306 851 aa2.52□□□□□ -2.01
MSB1YOR188W MUD2P36084 527 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W GRS1P38088 690 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W TMN3P40071 706 aa2.52□□□□□ -2.01
MSB1YOR188W MAD1P40957 749 aa2.52□□□□□ -2.01
MSB1YOR188W SBE2P42223 864 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W NMD5P46970 1048 aa2.52□□□□□ -2.01
MSB1YOR188W TRE1Q08919 783 aa2.52□□□□□ -2.01
MSB1YOR188W VPS54Q12071 889 aa2.52□□□□□ -2.01
MSB1YOR188W PEP5P12868 1029 aa2.52□□□□□ -2.01
MSB1YOR188W PUT4P15380 627 aa2.52□□□□□ -2.01
MSB1YOR188W RSA4P25382 515 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W VBA3P25594 458 aa2.52□□□□□ -2.01
MSB1YOR188W RRN6P32786 894 aa2.52□□□□□ -2.01
MSB1YOR188W YBL055CP34220 418 aaPredicted RBP2.52□□□□□ -2.01
MSB1YOR188W BYE1P36106 594 aa2.52□□□□□ -2.01
MSB1YOR188W VBA5P36172 582 aa2.52□□□□□ -2.01
MSB1YOR188W YBL036CP38197 257 aa2.52□□□□□ -2.01
MSB1YOR188W BRL1P38770 471 aa2.52□□□□□ -2.01
MSB1YOR188W PSY2P40164 858 aa2.52□□□□□ -2.01
MSB1YOR188W SNZ3P43545 298 aa2.52□□□□□ -2.01
MSB1YOR188W POL31P46957 487 aa2.52□□□□□ -2.01
MSB1YOR188W TCB2P48231 1178 aa2.52□□□□□ -2.01
MSB1YOR188W MND1P53102 219 aa2.52□□□□□ -2.01
MSB1YOR188W SNZ2P53824 298 aa2.52□□□□□ -2.01
MSB1YOR188W RPL22BP56628 122 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W MZM1Q03429 123 aaPredicted RBP2.52□□□□□ -2.01
MSB1YOR188W SXM1Q04175 944 aaKnown RBP2.52□□□□□ -2.01
MSB1YOR188W GYL1Q04322 720 aa2.52□□□□□ -2.01
MSB1YOR188W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01 RIP-Chip
MSB1YOR188W YML002WP0CF17 737 aa2.51□□□□□ -2.01
MSB1YOR188W MSH1P25846 959 aa2.51□□□□□ -2.01
MSB1YOR188W GCD6P32501 712 aaKnown RBP2.51□□□□□ -2.01
MSB1YOR188W LTV1P34078 463 aa2.51□□□□□ -2.01
MSB1YOR188W QNS1P38795 714 aaKnown RBP2.51□□□□□ -2.01
MSB1YOR188W ALD5P40047 520 aaKnown RBP2.51□□□□□ -2.01
MSB1YOR188W YNL011CP53980 444 aa2.51□□□□□ -2.01
MSB1YOR188W STP1Q00947 519 aa2.51□□□□□ -2.01
MSB1YOR188W YPL034WQ03083 165 aa2.51□□□□□ -2.01
MSB1YOR188W KAP95Q06142 861 aaKnown RBP2.51□□□□□ -2.01
MSB1YOR188W DNL4Q08387 944 aaPredicted RBP2.51□□□□□ -2.01
MSB1YOR188W AIM41Q12032 185 aa2.51□□□□□ -2.01
MSB1YOR188W MAM3Q12296 706 aa2.51□□□□□ -2.01
MSB1YOR188W YKL068W-AQ3E826 78 aa2.51□□□□□ -2.01
MSB1YOR188W DBF4P32325 704 aa2.51□□□□□ -2.01
MSB1YOR188W CBF2P32504 956 aa2.51□□□□□ -2.01
MSB1YOR188W SLA2P33338 968 aa2.51□□□□□ -2.01
MSB1YOR188W LDH1P38139 375 aa2.51□□□□□ -2.01
MSB1YOR188W CIN4P39110 191 aa2.51□□□□□ -2.01
MSB1YOR188W SGM1P47166 707 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms