RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	PNP1	Q05788	311 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	CLP1	Q08685	445 aa	Predicted RBP	4.92	□□□□□ -1.62
SSB2	YNL209W	ACM1	Q08981	209 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	NKP1	Q12493	238 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	YOL087C	Q99247	1116 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	RPL4A	P10664	362 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	VMA4	P22203	233 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	YUR1	P26725	428 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	BUD14	P27637	709 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	PEX2	P32800	271 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	ECM2	P38241	364 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	VID24	P38263	362 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	SPP381	P38282	291 aa	Predicted RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	CBR1	P38626	284 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	YHR218W	P38899	603 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	YEL025C	P39991	1188 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	HMF1	P40037	129 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	SBE2	P42223	864 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	NET1	P47035	1189 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	ASN1	P49089	572 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	RPL4B	P49626	362 aa	Known RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	INP52	P50942	1183 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	RRT6	P53117	311 aa	Predicted RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	FAP1	P53971	965 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	SPO19	Q03029	223 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	TDA9	Q04545	1251 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	YDR222W	Q04925	415 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	STE23	Q06010	1027 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	ARR2	Q06597	130 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	IWR1	Q07532	353 aa	Predicted RBP	4.91	□□□□□ -1.62
SSB2	YNL209W	SHS1	Q07657	551 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	SDH5	Q08230	162 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	CIR2	Q08822	631 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	YLL058W	Q12198	575 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	OSW2	Q12202	724 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	ERP4	Q12450	207 aa		4.91	□□□□□ -1.62
SSB2	YNL209W	RNR1	P21524	888 aa	Known RBP	4.9	□□□□□ -1.62
SSB2	YNL209W	PKC1	P24583	1151 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	RRT12	P25381	491 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	SEC21	P32074	935 aa	Known RBP	4.9	□□□□□ -1.62
SSB2	YNL209W	DBF4	P32325	704 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	SEC8	P32855	1065 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	TFC4	P33339	1025 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	TIF3	P34167	436 aa	Known RBP	4.9	□□□□□ -1.62
SSB2	YNL209W	CSG2	P35206	410 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	FLR1	P38124	548 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
SSB2	YNL209W	TIF5	P38431	405 aa	Known RBP	4.9	□□□□□ -1.62
SSB2	YNL209W	NPP2	P39997	493 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	YTA12	P40341	825 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	SUM1	P46676	1062 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	KEL2	P50090	882 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	CUL3	P53202	744 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	YGR111W	P53265	400 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	RPA49	Q01080	415 aa	Predicted RBP	4.9	□□□□□ -1.62
SSB2	YNL209W	YMR102C	Q03177	834 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	YMR187C	Q03236	431 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	JIP4	Q03361	876 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	PPM1	Q04081	328 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	PMT7	Q06644	662 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	YOR059C	Q08448	450 aa	Known RBP	4.9	□□□□□ -1.62
SSB2	YNL209W	ZPS1	Q12512	249 aa		4.9	□□□□□ -1.62
SSB2	YNL209W	HMG1	P12683	1054 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	CDC42	P19073	191 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
SSB2	YNL209W	KIN82	P25341	720 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	CAP1	P28495	268 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	EFB1	P32471	206 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	UBC6	P33296	250 aa	Predicted RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	END3	P39013	349 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	ASG1	P40467	964 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	DAS1	P47005	663 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	GPI8	P49018	411 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	PSP2	P50109	593 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	ATG1	P53104	897 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	DRN1	P53255	507 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	DSL1	P53847	754 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	UTP6	Q02354	440 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	TRS130	Q03660	1102 aa		4.9	□□□□□ -1.63
SSB2	YNL209W	ABP140	Q08641	628 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	MSC6	Q08818	692 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	DBP10	Q12389	995 aa	Known RBP	4.9	□□□□□ -1.63
SSB2	YNL209W	PYC1	P11154	1178 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	RPC37	P36121	282 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	MSG5	P38590	489 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	OCA5	P38738	679 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	DYS1	P38791	387 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	SPC72	P39723	622 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	ARB1	P40024	610 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	MKT1	P40850	830 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	YRB1	P41920	201 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SSB2	YNL209W	PHO86	P46956	311 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	SHE4	P51534	789 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	CPR6	P53691	371 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	NOG2	P53742	486 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	ADE12	P80210	433 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	STE20	Q03497	939 aa	Known RBP	4.89	□□□□□ -1.63
SSB2	YNL209W	USA1	Q03714	838 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	ARO80	Q04052	950 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms