RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	CDC42	P19073	191 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	CKA2	P19454	339 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	HCA4	P20448	770 aa	Known RBP	2.65	□□□□□ -1.98
TOP2	YNL088W	ROX1	P25042	368 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	AGP1	P25376	633 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	ABD1	P32783	436 aa	Predicted RBP	2.65	□□□□□ -1.98
TOP2	YNL088W	SLA1	P32790	1244 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	SUR1	P33300	382 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	PCH2	P38126	564 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	SIF2	P38262	535 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	BIT2	P38346	545 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	RGA1	P39083	1007 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	OAF1	P39720	1047 aa	Predicted RBP	2.65	□□□□□ -1.98
TOP2	YNL088W	MTW1	P39731	289 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	ART5	P53244	586 aa	Known RBP	2.65	□□□□□ -1.98
TOP2	YNL088W	EEB1	Q02891	456 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	SHE9	Q04172	456 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	YLR345W	Q06137	509 aa		2.65	□□□□□ -1.98
TOP2	YNL088W	RKM1	Q08961	583 aa	Predicted RBP	2.65	□□□□□ -1.98
TOP2	YNL088W	PFK27	Q12471	397 aa	Predicted RBP	2.65	□□□□□ -1.98
TOP2	YNL088W	SEM1	O94742	89 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	SEN2	P16658	377 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	ERG3	P32353	365 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	ISC10	P32645	267 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	BDF1	P35817	686 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	YKL023W	P36103	277 aa	Known RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	MAK5	P38112	773 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	OPY1	P38271	328 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	SLI15	P38283	698 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	ARF3	P40994	183 aa	RIP-Chip data	2.65	□□□□□ -1.99	not detected
TOP2	YNL088W	SMK1	P41808	388 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	MNN11	P46985	422 aa	Known RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	NUT1	P53114	1132 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	MET13	P53128	600 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	OAZ1	Q02803	292 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	RSF1	Q05043	376 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	KAP95	Q06142	861 aa	Known RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	BI4	P03879	638 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	FBP1	P09201	348 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	DBP3	P20447	523 aa	Known RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	HEM12	P32347	362 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	YBR138C	P38277	524 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	YBR225W	P38321	900 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	PAN2	P53010	1115 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	OGG1	P53397	376 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	DSE4	P53753	1117 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	TOF1	P53840	1238 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	SSL2	Q00578	843 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	LCD1	Q04377	747 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	AIM32	Q04689	311 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	DIB1	Q06819	143 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP2	YNL088W	VPS54	Q12071	889 aa		2.65	□□□□□ -1.99
TOP2	YNL088W	GAL7	P08431	366 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	SRD1	P09007	221 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	NGG1	P32494	702 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	MRPL40	P36534	297 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	BEM4	P39011	633 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	MET18	P40469	1032 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	NAS2	P40555	220 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	SUT1	P53032	299 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	YLR456W	Q06199	204 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	TMA46	Q12000	345 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	GYP5	Q12344	894 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	RAD18	P10862	487 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	RPI1	P23250	407 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	XRS2	P33301	854 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	YKR018C	P36114	725 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	ALG14	P38242	237 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	HSL7	P38274	827 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	COS111	P38308	924 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	XDJ1	P39102	459 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	GYP8	P43570	497 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	ABM1	P47146	123 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	ATH1	P48016	1211 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	HFM1	P51979	1187 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	MIG2	P53035	382 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	YGR067C	P53243	804 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	YGR273C	P53329	174 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	CNM67	P53865	581 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	STE20	Q03497	939 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	VAC14	Q06708	880 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
TOP2	YNL088W	SKI3	P17883	1432 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	PRP9	P19736	530 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	AFT1	P22149	690 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	YCK2	P23292	546 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	MSN4	P33749	630 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	MMS4	P38257	691 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	YBR197C	P38306	217 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	PPE1	P38796	400 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	CKB2	P38930	258 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	SAH1	P39954	449 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	GCN20	P43535	752 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	GCV2	P49095	1034 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	SLD3	P53135	668 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	CBK1	P53894	756 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	RPM2	Q02773	1202 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	ERB1	Q04660	807 aa	Known RBP	2.64	□□□□□ -1.99
TOP2	YNL088W	BSC2	Q05611	235 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	PSY3	Q12318	242 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms