RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B HRB1P38922 454 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
YNL054W-BYNL054W-B ULP1Q02724 621 aa0.76□□□□□ -2.29
YNL054W-BYNL054W-B COBP00163 385 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B BI4P03879 638 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TPK2P06245 380 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TOM70P07213 617 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-LR4P0C2I8 440 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-DR6P0CX70 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-ER1P0CX71 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-LR2P0CX72 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-PLP0CX73 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-JR1P0CX74 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-LR3P0CX75 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-ML2P0CX76 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B BEM3P32873 1128 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B DUR3P33413 735 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B PPS1P38148 807 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B SIP5P40210 489 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B SFB2P53953 876 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-GR1Q12085 440 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B UBX3Q12229 455 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B MDM20Q12387 796 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-PR3Q6Q5H1 440 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY1A-OLQ92392 440 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B PDR15Q04182 1529 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B CDC6P09119 513 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B PXL1P36166 706 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B RRP3P38712 501 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B RRP8P38961 392 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B YGR053CP53234 283 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B NOG2P53742 486 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B CEF1Q03654 590 aaPredicted RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B CWC15Q03772 175 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B REV1P12689 985 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B SEC20P28791 383 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B PRO3P32263 286 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B APL3P38065 1025 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B IRR1P40541 1150 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B RTS2P40962 232 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B YGL039WP53183 348 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B PAL1Q05518 499 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B REH1Q06709 432 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B WHI5Q12416 295 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B TY3B-IQ7LHG5 1498 aaKnown RBP0.75□□□□□ -2.29
YNL054W-BYNL054W-B RPC34P32910 317 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B MDV1P47025 714 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B BFA1P47113 574 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B RMD1Q03441 430 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B CDA1Q06702 301 aa0.75□□□□□ -2.29
YNL054W-BYNL054W-B DUR1,2P32528 1835 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B APN1P22936 367 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B CDC12P32468 407 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B GMH1P36125 273 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B CCT5P40413 562 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B SMX3P54999 86 aaPredicted RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B GEA2P39993 1459 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B YHR078WP38799 552 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B CUL3P53202 744 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B WHI4Q07655 649 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B PAN1P32521 1480 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B HKR1P41809 1802 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B PRC1P00729 532 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B FAS2P19097 1887 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B URE2P23202 354 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B UGA2P38067 497 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B DHH1P39517 506 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B FAA2P39518 744 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B DOT6P40059 670 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B YIL108WP40483 696 aaKnown RBP0.74□□□□□ -2.29
YNL054W-BYNL054W-B GYP7P48365 746 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B TDA9Q04545 1251 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B YOR022CQ12204 715 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B TAF3Q12297 353 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B RPD3P32561 433 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B HFM1P51979 1187 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B YDL073WQ07454 984 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B UPC2Q12151 913 aa0.74□□□□□ -2.29
YNL054W-BYNL054W-B RPS2P25443 254 aaKnown RBP0.73□□□□□ -2.29
YNL054W-BYNL054W-B CDC48P25694 835 aaKnown RBP0.73□□□□□ -2.29
YNL054W-BYNL054W-B YKL107WP34251 309 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B TRZ1P36159 838 aaPredicted RBP0.73□□□□□ -2.29
YNL054W-BYNL054W-B TOM71P38825 639 aaKnown RBP0.73□□□□□ -2.29
YNL054W-BYNL054W-B NCS6P53088 359 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B CPR8P53728 308 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B GIC1P38785 314 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B SDP1P40479 209 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B YGR125WP53273 1036 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B ORC4P54791 529 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B ULA1Q12059 462 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B NUP159P40477 1460 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B MPH2P0CD99 609 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B TSL1P38427 1098 aaKnown RBP0.73□□□□□ -2.29
YNL054W-BYNL054W-B XYL2Q07993 356 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B OSH2Q12451 1283 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B MET5P47169 1442 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B SSD1P24276 1250 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
YNL054W-BYNL054W-B CTF13P35203 478 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B HOT13P36078 116 aa0.73□□□□□ -2.29
YNL054W-BYNL054W-B STM1P39015 273 aaKnown RBP0.73□□□□□ -2.29
YNL054W-BYNL054W-B PEA2P40091 420 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms