RNA–Protein interactions for RNA: YLR410W-A

YLR410W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YLR410W-A, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-AYLR410W-A SSZ1P38788 538 aaKnown RBP5.3□□□□□ -1.56
YLR410W-AYLR410W-A SDS3P40505 327 aa5.3□□□□□ -1.56
YLR410W-AYLR410W-A BRE5P53741 515 aaKnown RBP5.3□□□□□ -1.56
YLR410W-AYLR410W-A HRP1Q99383 534 aaKnown RBP5.3□□□□□ -1.56
YLR410W-AYLR410W-A NUP145P49687 1317 aa5.3□□□□□ -1.56
YLR410W-AYLR410W-A CDC43P18898 376 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A MTH1P35198 433 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A SPC42P36094 363 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A SFB3P38810 929 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A GID8P40208 455 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A YJR039WP47107 1121 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A YJR142WP47173 342 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A PAN2P53010 1115 aaPredicted RBP5.29□□□□□ -1.56
YLR410W-AYLR410W-A GND2P53319 492 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A THI73Q07904 523 aa5.29□□□□□ -1.56
YLR410W-AYLR410W-A PRP19P32523 503 aaKnown RBP5.28□□□□□ -1.56
YLR410W-AYLR410W-A YHR202WP38887 602 aa5.28□□□□□ -1.56
YLR410W-AYLR410W-A CKB2P38930 258 aa5.28□□□□□ -1.56
YLR410W-AYLR410W-A LYS9P38999 446 aa5.28□□□□□ -1.56
YLR410W-AYLR410W-A PMT3P47190 753 aa5.28□□□□□ -1.56
YLR410W-AYLR410W-A LEE1Q02799 301 aaKnown RBP5.28□□□□□ -1.56
YLR410W-AYLR410W-A ISA1Q07821 250 aaPredicted RBP5.28□□□□□ -1.56
YLR410W-AYLR410W-A DCS2Q12123 353 aa5.28□□□□□ -1.56
YLR410W-AYLR410W-A CLF1Q12309 687 aaPredicted RBP5.28□□□□□ -1.56
YLR410W-AYLR410W-A ERG6P25087 383 aaKnown RBP5.27□□□□□ -1.57
YLR410W-AYLR410W-A RET2P43621 546 aa5.27□□□□□ -1.57
YLR410W-AYLR410W-A HMO1Q03973 246 aaKnown RBP5.27□□□□□ -1.57
YLR410W-AYLR410W-A IRC10Q08118 586 aa5.27□□□□□ -1.57
YLR410W-AYLR410W-A ECM3Q99252 613 aa5.27□□□□□ -1.57
YLR410W-AYLR410W-A ERG20P08524 352 aaKnown RBP5.26□□□□□ -1.57
YLR410W-AYLR410W-A KIN3P22209 435 aa5.26□□□□□ -1.57
YLR410W-AYLR410W-A SEC15P22224 910 aa5.26□□□□□ -1.57
YLR410W-AYLR410W-A SSD1P24276 1250 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
YLR410W-AYLR410W-A TYS1P36421 394 aaKnown RBP5.26□□□□□ -1.57
YLR410W-AYLR410W-A AKL1P38080 1108 aaKnown RBP5.26□□□□□ -1.57
YLR410W-AYLR410W-A CRP1P38845 465 aaKnown RBP5.26□□□□□ -1.57
YLR410W-AYLR410W-A GET2P40056 285 aa5.26□□□□□ -1.57
YLR410W-AYLR410W-A NOP9P47077 666 aaKnown RBP5.26□□□□□ -1.57
YLR410W-AYLR410W-A YJR096WP47137 282 aa5.26□□□□□ -1.57
YLR410W-AYLR410W-A YGR153WP48238 217 aa5.26□□□□□ -1.57
YLR410W-AYLR410W-A MRH1Q12117 320 aaPredicted RBP5.26□□□□□ -1.57
YLR410W-AYLR410W-A ZRT2Q12436 422 aa5.26□□□□□ -1.57
YLR410W-AYLR410W-A SIR3P06701 978 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A PEX1P24004 1043 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A PHO11P35842 467 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A BRN1P38170 754 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A PHO12P38693 467 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A YNL195CP40168 261 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A RSC8P43609 557 aaKnown RBP5.25□□□□□ -1.57
YLR410W-AYLR410W-A SMX3P54999 86 aaPredicted RBP5.25□□□□□ -1.57
YLR410W-AYLR410W-A UME1Q03010 460 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A YMR210WQ03649 449 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A VHS3Q08438 674 aa5.25□□□□□ -1.57
YLR410W-AYLR410W-A NUG1P40010 520 aaKnown RBP5.24□□□□□ -1.57
YLR410W-AYLR410W-A GFA1P14742 717 aaKnown RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A DMC1P25453 334 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A HRB1P38922 454 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
YLR410W-AYLR410W-A PIG2P40187 538 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A ARG2P40360 574 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A NDC80P40460 691 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A QRI1P43123 477 aaKnown RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A YNR029CP53729 429 aaKnown RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A TAD3Q9URQ3 322 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A RPS9BP05755 195 aaKnown RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A IMG2P25642 146 aaPredicted RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A PET127P32606 800 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A CTR1P49573 406 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A YGR237CP50089 785 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A FHN1P53279 174 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A DOS2P54858 310 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A MTQ2Q03920 221 aaPredicted RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A VBA4Q04602 768 aaKnown RBP5.23□□□□□ -1.57
YLR410W-AYLR410W-A THI22Q06490 572 aa5.23□□□□□ -1.57
YLR410W-AYLR410W-A ABF1P14164 731 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A HCA4P20448 770 aaKnown RBP5.22□□□□□ -1.57
YLR410W-AYLR410W-A KIN82P25341 720 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A BIT2P38346 545 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A YJL206CP39529 758 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A HFD1Q04458 532 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A YLR407WQ06070 228 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A FAP7Q12055 197 aaPredicted RBP5.22□□□□□ -1.57
YLR410W-AYLR410W-A USV1Q12132 391 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A POM34Q12445 299 aa5.22□□□□□ -1.57
YLR410W-AYLR410W-A FRS1P15624 595 aaKnown RBP5.21□□□□□ -1.58
YLR410W-AYLR410W-A PRP28P23394 588 aa5.21□□□□□ -1.58
YLR410W-AYLR410W-A BCS1P32839 456 aa5.21□□□□□ -1.58
YLR410W-AYLR410W-A GLG1P36143 616 aa5.21□□□□□ -1.58
YLR410W-AYLR410W-A TDP1P38319 544 aa5.21□□□□□ -1.58
YLR410W-AYLR410W-A BEM4P39011 633 aa5.21□□□□□ -1.58
YLR410W-AYLR410W-A GZF3P42944 551 aaKnown RBP5.21□□□□□ -1.58
YLR410W-AYLR410W-A ATG4P53867 494 aa5.21□□□□□ -1.58
YLR410W-AYLR410W-A YTM1Q12024 460 aaPredicted RBP5.21□□□□□ -1.58
YLR410W-AYLR410W-A PRP22P24384 1145 aaKnown RBP5.2□□□□□ -1.58
YLR410W-AYLR410W-A YKU70P32807 602 aa5.2□□□□□ -1.58
YLR410W-AYLR410W-A BDH2P39713 417 aa5.2□□□□□ -1.58
YLR410W-AYLR410W-A RGC1Q06108 1083 aaKnown RBP5.2□□□□□ -1.58
YLR410W-AYLR410W-A VPS36Q06696 566 aa5.2□□□□□ -1.58
YLR410W-AYLR410W-A MLH3Q12083 715 aa5.2□□□□□ -1.58
YLR410W-AYLR410W-A CHS5Q12114 671 aaKnown RBP5.2□□□□□ -1.58
YLR410W-AYLR410W-A THR1P17423 357 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms