RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	RAI1	P53063	387 aa	Known RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	RBG2	P53295	368 aa	Known RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	SPC19	Q03954	165 aa		3.81	□□□□□ -1.8
VIP1	YLR410W	PET309	P32522	965 aa	Predicted RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	LAM1	P38851	1228 aa		3.81	□□□□□ -1.8
VIP1	YLR410W	SLN1	P39928	1220 aa	Predicted RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	RPN3	P40016	523 aa	Known RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	YKE2	P52553	114 aa		3.81	□□□□□ -1.8
VIP1	YLR410W	GPD1	Q00055	391 aa	Known RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	MTD1	Q02046	320 aa	Known RBP	3.81	□□□□□ -1.8
VIP1	YLR410W	RPS17A	P02407	136 aa	Known RBP	3.8	□□□□□ -1.8
VIP1	YLR410W	SWI6	P09959	803 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	RPS17B	P14127	136 aa	Known RBP	3.8	□□□□□ -1.8
VIP1	YLR410W	POL3	P15436	1097 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	YKR018C	P36114	725 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	SWD1	P39706	426 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	STL1	P39932	569 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	NOP15	P53927	220 aa	Predicted RBP	3.8	□□□□□ -1.8
VIP1	YLR410W	MRPL13	Q02204	264 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	RGA2	Q06407	1009 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	PHO5	P00635	467 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	SNF1	P06782	633 aa	Known RBP	3.8	□□□□□ -1.8
VIP1	YLR410W	PGS1	P25578	521 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	PUG1	P40100	303 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	MTR3	P48240	250 aa	Predicted RBP	3.8	□□□□□ -1.8
VIP1	YLR410W	MRPL19	P53875	158 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	SGO1	Q08490	590 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	CDC26	P14724	124 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
VIP1	YLR410W	SAK1	P38990	1142 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	UME6	P39001	836 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	YPS7	Q06325	596 aa		3.8	□□□□□ -1.8
VIP1	YLR410W	RAD16	P31244	790 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	ECM21	P38167	1117 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	MDR1	P53258	950 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	GCR2	Q01722	534 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	OPY2	Q06810	360 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	RTK1	Q12100	620 aa	Predicted RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	PSF3	Q12146	194 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	PCD1	Q12524	340 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	HSC82	P15108	705 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	HOP1	P20050	605 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	VMA8	P32610	256 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	SSZ1	P38788	538 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	GTS1	P40956	396 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	DSE4	P53753	1117 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	TDA9	Q04545	1251 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	VID22	Q05934	901 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	WHI4	Q07655	649 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	RSC58	Q07979	502 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	TRM8	Q12009	286 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	TY1A-NL1	Q12391	440 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	KCS1	Q12494	1050 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	HIR3	P47171	1648 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	SSK2	P53599	1579 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	VAS1	P07806	1104 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	PAH1	P32567	862 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	RPT3	P33298	428 aa	Known RBP	3.79	□□□□□ -1.8
VIP1	YLR410W	PIK1	P39104	1066 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	ALT1	P52893	592 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	MEH1	Q02205	184 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	YDR444W	Q04093	687 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	YKU80	Q04437	629 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	RTP1	Q12751	981 aa		3.79	□□□□□ -1.8
VIP1	YLR410W	MET8	P15807	274 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	RIT1	P23796	513 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	NUP120	P35729	1037 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	GPD2	P41911	440 aa	Known RBP	3.78	□□□□□ -1.8
VIP1	YLR410W	SQS1	P53866	767 aa	Known RBP	3.78	□□□□□ -1.8
VIP1	YLR410W	TAH18	Q12181	623 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	YLL058W	Q12198	575 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	KAP123	P40069	1113 aa	Known RBP	3.78	□□□□□ -1.8
VIP1	YLR410W	CCT8	P47079	568 aa	Known RBP	3.78	□□□□□ -1.8
VIP1	YLR410W	SLP1	Q12232	587 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	SWR1	Q05471	1514 aa		3.78	□□□□□ -1.8
VIP1	YLR410W	DHR2	P36009	735 aa	Predicted RBP	3.77	□□□□□ -1.81
VIP1	YLR410W	YBR138C	P38277	524 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	RAD26	P40352	1085 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	SAP4	P53036	818 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	ACS1	Q01574	713 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	SNO4	Q04902	237 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	MFB1	Q04922	465 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
VIP1	YLR410W	HSP33	Q08914	237 aa	Known RBP	3.77	□□□□□ -1.81
VIP1	YLR410W	HSP32	Q08992	237 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	COX17	Q12287	69 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	YVC1	Q12324	675 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	APM4	Q99186	491 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	ADE3	P07245	946 aa	Known RBP	3.77	□□□□□ -1.81
VIP1	YLR410W	ECM32	P32644	1121 aa	Known RBP	3.77	□□□□□ -1.81
VIP1	YLR410W	SRB7	P47822	140 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	EXG2	P52911	562 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	ARA2	Q04212	335 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	SGD1	Q06132	899 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	YLR352W	Q06479	807 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	VHS3	Q08438	674 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	GPB1	Q08886	897 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	THI21	Q08975	551 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	PHM7	Q12252	991 aa		3.77	□□□□□ -1.81
VIP1	YLR410W	HIF1	Q12373	385 aa		3.77	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms