RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C GAD1Q04792 585 aa5.75□□□□□ -1.49
VPS1YKR001C DUS4Q06063 367 aa5.75□□□□□ -1.49
VPS1YKR001C ABP140Q08641 628 aaKnown RBP5.75□□□□□ -1.49
VPS1YKR001C TRM8Q12009 286 aa5.75□□□□□ -1.49
VPS1YKR001C SMC6Q12749 1114 aa5.75□□□□□ -1.49
VPS1YKR001C MEI4P29467 408 aa5.74□□□□□ -1.49
VPS1YKR001C ATP3P38077 311 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C DED81P38707 554 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C YHR131CP38835 850 aa5.74□□□□□ -1.49
VPS1YKR001C ALA1P40825 983 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C MMM1P41800 426 aa5.74□□□□□ -1.49
VPS1YKR001C MON1P53129 644 aa5.74□□□□□ -1.49
VPS1YKR001C YNR021WP53723 404 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C PTA1Q01329 785 aaPredicted RBP5.74□□□□□ -1.49
VPS1YKR001C YOR289WQ12012 251 aaPredicted RBP5.74□□□□□ -1.49
VPS1YKR001C SFI1Q12369 946 aa5.74□□□□□ -1.49
VPS1YKR001C PET122P10355 254 aa5.74□□□□□ -1.49
VPS1YKR001C MIP1P15801 1254 aa5.74□□□□□ -1.49
VPS1YKR001C HSP60P19882 572 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C DBP1P24784 617 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C DPH2P32461 534 aa5.74□□□□□ -1.49
VPS1YKR001C KTR2P33550 425 aa5.74□□□□□ -1.49
VPS1YKR001C ALG3P38179 458 aa5.74□□□□□ -1.49
VPS1YKR001C RFC1P38630 861 aaKnown RBP5.74□□□□□ -1.49
VPS1YKR001C YHL012WP38709 493 aa5.74□□□□□ -1.49
VPS1YKR001C VID28P40547 921 aa5.74□□□□□ -1.49
VPS1YKR001C BNA6P43619 295 aa5.74□□□□□ -1.49
VPS1YKR001C SPC19Q03954 165 aa5.74□□□□□ -1.49
VPS1YKR001C YKU80Q04437 629 aa5.74□□□□□ -1.49
VPS1YKR001C YKL068W-AQ3E826 78 aa5.74□□□□□ -1.49
VPS1YKR001C ATP4P05626 244 aa5.73□□□□□ -1.49
VPS1YKR001C ISY1P21374 235 aaPredicted RBP5.73□□□□□ -1.49
VPS1YKR001C RPC53P25441 422 aa5.73□□□□□ -1.49
VPS1YKR001C VMA8P32610 256 aaKnown RBP5.73□□□□□ -1.49
VPS1YKR001C CNS1P33313 385 aa5.73□□□□□ -1.49
VPS1YKR001C CUE2P36075 443 aaKnown RBP5.73□□□□□ -1.49
VPS1YKR001C SPT8P38915 602 aa5.73□□□□□ -1.49
VPS1YKR001C MNN1P39106 762 aa5.73□□□□□ -1.49
VPS1YKR001C TOK1P40310 691 aa5.73□□□□□ -1.49
VPS1YKR001C LSB1P53281 241 aa5.73□□□□□ -1.49
VPS1YKR001C RPM2Q02773 1202 aa5.73□□□□□ -1.49
VPS1YKR001C SND1Q04007 877 aa5.73□□□□□ -1.49
VPS1YKR001C RTT10Q08924 1013 aa5.73□□□□□ -1.49
VPS1YKR001C MAK21Q12176 1025 aaKnown RBP5.73□□□□□ -1.49
VPS1YKR001C LDB19Q12502 818 aa5.73□□□□□ -1.49
VPS1YKR001C ADF1Q2V2Q1 113 aa5.73□□□□□ -1.49
VPS1YKR001C YML002WP0CF17 737 aa5.72□□□□□ -1.49
VPS1YKR001C KGD2P19262 463 aaPredicted RBP5.72□□□□□ -1.49
VPS1YKR001C SFL1P20134 766 aa5.72□□□□□ -1.49
VPS1YKR001C VPS1P21576 704 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C PRE8P23639 250 aa5.72□□□□□ -1.49
VPS1YKR001C YKT6P36015 200 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C YKL023WP36103 277 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C GRS1P38088 690 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C RTC3P38804 111 aaPredicted RBP5.72□□□□□ -1.49
VPS1YKR001C PCL7P40186 285 aa5.72□□□□□ -1.49
VPS1YKR001C AGE2P40529 298 aa5.72□□□□□ -1.49
VPS1YKR001C ALB1P47019 175 aaPredicted RBP5.72□□□□□ -1.49
VPS1YKR001C FYV6P53913 173 aa5.72□□□□□ -1.49
VPS1YKR001C SSL2Q00578 843 aa5.72□□□□□ -1.49
VPS1YKR001C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
VPS1YKR001C BUL2Q03758 920 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C DYN3Q04949 312 aa5.72□□□□□ -1.49
VPS1YKR001C YOL036WQ08206 761 aa5.72□□□□□ -1.49
VPS1YKR001C YPL225WQ08971 146 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C RRP6Q12149 733 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C HTZ1Q12692 134 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C MPD2Q99316 277 aa5.72□□□□□ -1.49
VPS1YKR001C MOT1P32333 1867 aa5.72□□□□□ -1.49
VPS1YKR001C JIP3O13555 125 aa5.72□□□□□ -1.49
VPS1YKR001C CDC19P00549 500 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C GCD1P09032 578 aaPredicted RBP5.72□□□□□ -1.49
VPS1YKR001C TRX1P22217 103 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C SRB4P32569 687 aa5.72□□□□□ -1.49
VPS1YKR001C PEX32P38292 413 aa5.72□□□□□ -1.49
VPS1YKR001C BDH2P39713 417 aa5.72□□□□□ -1.49
VPS1YKR001C YIL092WP40497 633 aa5.72□□□□□ -1.49
VPS1YKR001C BNA1P47096 177 aa5.72□□□□□ -1.49
VPS1YKR001C RET3P53600 189 aa5.72□□□□□ -1.49
VPS1YKR001C RSA3Q05942 220 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C YLR326WQ06170 240 aaKnown RBP5.72□□□□□ -1.49
VPS1YKR001C MMR1Q06324 491 aa5.72□□□□□ -1.49
VPS1YKR001C SYO1Q07395 620 aa5.72□□□□□ -1.49
VPS1YKR001C NPP1P25353 742 aa5.71□□□□□ -1.5
VPS1YKR001C UTP11P34247 250 aaPredicted RBP5.71□□□□□ -1.5
VPS1YKR001C DSS1P39112 969 aa5.71□□□□□ -1.5
VPS1YKR001C YIL166CP40445 542 aa5.71□□□□□ -1.5
VPS1YKR001C CNN1P43618 361 aa5.71□□□□□ -1.5
VPS1YKR001C PTK2P47116 818 aaKnown RBP5.71□□□□□ -1.5
VPS1YKR001C COG2P53271 262 aa5.71□□□□□ -1.5
VPS1YKR001C YGR125WP53273 1036 aa5.71□□□□□ -1.5
VPS1YKR001C VPS36Q06696 566 aa5.71□□□□□ -1.5
VPS1YKR001C NEW1Q08972 1196 aaKnown RBP5.71□□□□□ -1.5
VPS1YKR001C STF1P01098 86 aa5.71□□□□□ -1.5
VPS1YKR001C STE3P06783 470 aa5.71□□□□□ -1.5
VPS1YKR001C TIF1P10081 395 aaKnown RBP5.71□□□□□ -1.5
VPS1YKR001C SRM1P21827 482 aa5.71□□□□□ -1.5
VPS1YKR001C MRPL8P22353 238 aa5.71□□□□□ -1.5
VPS1YKR001C EDC3P39998 551 aaKnown RBP5.71□□□□□ -1.5
VPS1YKR001C ZIM17P42844 174 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms