RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W RPA135P22138 1203 aaKnown RBP6.61□□□□□ -1.35
PRP40YKL012W MSM1P22438 575 aa6.61□□□□□ -1.35
PRP40YKL012W ENP2P48234 707 aaKnown RBP6.61□□□□□ -1.35
PRP40YKL012W YBP2P53169 641 aa6.61□□□□□ -1.35
PRP40YKL012W PLB2Q03674 706 aa6.61□□□□□ -1.35
PRP40YKL012W COG4Q06096 861 aa6.61□□□□□ -1.35
PRP40YKL012W YPS7Q06325 596 aa6.61□□□□□ -1.35
PRP40YKL012W ARP7Q12406 477 aa6.61□□□□□ -1.35
PRP40YKL012W MSH1P25846 959 aa6.6□□□□□ -1.35
PRP40YKL012W DGR2P32330 852 aa6.6□□□□□ -1.35
PRP40YKL012W VHR1P40522 640 aa6.6□□□□□ -1.35
PRP40YKL012W HIM1Q06674 414 aa6.6□□□□□ -1.35
PRP40YKL012W SEC18P18759 758 aaKnown RBP6.59□□□□□ -1.35
PRP40YKL012W SDS22P36047 338 aa6.59□□□□□ -1.35
PRP40YKL012W ETP1P38748 585 aaKnown RBP6.59□□□□□ -1.35
PRP40YKL012W DUN1P39009 513 aa6.59□□□□□ -1.35
PRP40YKL012W GCV2P49095 1034 aa6.59□□□□□ -1.35
PRP40YKL012W GTF1P53260 183 aaPredicted RBP6.59□□□□□ -1.35
PRP40YKL012W MOT3P54785 490 aaKnown RBP6.59□□□□□ -1.35
PRP40YKL012W ISA1Q07821 250 aaPredicted RBP6.59□□□□□ -1.35
PRP40YKL012W PSF3Q12146 194 aa6.59□□□□□ -1.35
PRP40YKL012W TRP3P00937 484 aa6.59□□□□□ -1.35
PRP40YKL012W HIS5P07172 385 aa6.59□□□□□ -1.35
PRP40YKL012W VPS27P40343 622 aaKnown RBP6.59□□□□□ -1.35
PRP40YKL012W PRP31P49704 494 aaPredicted RBP6.59□□□□□ -1.35
PRP40YKL012W EXG2P52911 562 aa6.59□□□□□ -1.35
PRP40YKL012W CIA1Q05583 330 aa6.59□□□□□ -1.35
PRP40YKL012W SGD1Q06132 899 aa6.59□□□□□ -1.35
PRP40YKL012W STP4Q07351 490 aa6.59□□□□□ -1.35
PRP40YKL012W KCS1Q12494 1050 aa6.59□□□□□ -1.35
PRP40YKL012W TUB3P09734 445 aaKnown RBP6.58□□□□□ -1.36
PRP40YKL012W YEL076C-AP0CX16 216 aa6.58□□□□□ -1.36
PRP40YKL012W YLR464WP0CX17 216 aa6.58□□□□□ -1.36
PRP40YKL012W YEL076CP39971 216 aa6.58□□□□□ -1.36
PRP40YKL012W ICP55P40051 511 aa6.58□□□□□ -1.36
PRP40YKL012W ERR3P42222 437 aa6.58□□□□□ -1.36
PRP40YKL012W CHA4P43634 648 aa6.58□□□□□ -1.36
PRP40YKL012W TAF1P46677 1066 aa6.58□□□□□ -1.36
PRP40YKL012W NCS6P53088 359 aa6.58□□□□□ -1.36
PRP40YKL012W ARG5,6Q01217 863 aa6.58□□□□□ -1.36
PRP40YKL012W ROT1Q03691 256 aa6.58□□□□□ -1.36
PRP40YKL012W VHS3Q08438 674 aa6.58□□□□□ -1.36
PRP40YKL012W SWM1Q12379 170 aa6.58□□□□□ -1.36
PRP40YKL012W PYC1P11154 1178 aaKnown RBP6.57□□□□□ -1.36
PRP40YKL012W PRP4P20053 465 aaKnown RBP6.57□□□□□ -1.36
PRP40YKL012W SEC21P32074 935 aaKnown RBP6.57□□□□□ -1.36
PRP40YKL012W NGG1P32494 702 aa6.57□□□□□ -1.36
PRP40YKL012W PET127P32606 800 aa6.57□□□□□ -1.36
PRP40YKL012W TGL1P34163 548 aa6.57□□□□□ -1.36
PRP40YKL012W MSS4P38994 779 aa6.57□□□□□ -1.36
PRP40YKL012W PKH1Q03407 766 aa6.57□□□□□ -1.36
PRP40YKL012W TRS130Q03660 1102 aa6.57□□□□□ -1.36
PRP40YKL012W YLR415CO13578 112 aa6.57□□□□□ -1.36
PRP40YKL012W IME1P21190 360 aa6.57□□□□□ -1.36
PRP40YKL012W ADE2P21264 571 aaKnown RBP6.57□□□□□ -1.36
PRP40YKL012W SCS2P40075 244 aaKnown RBP6.57□□□□□ -1.36
PRP40YKL012W SSP2Q08646 371 aa6.57□□□□□ -1.36
PRP40YKL012W HMI1Q12039 706 aa6.57□□□□□ -1.36
PRP40YKL012W YDL177CQ12257 170 aa6.57□□□□□ -1.36
PRP40YKL012W RPN12P32496 274 aa6.56□□□□□ -1.36
PRP40YKL012W APL2P36000 726 aaPredicted RBP6.56□□□□□ -1.36
PRP40YKL012W SHM2P37291 469 aaKnown RBP6.56□□□□□ -1.36
PRP40YKL012W YBR259WP38338 688 aa6.56□□□□□ -1.36
PRP40YKL012W SIC1P38634 284 aa6.56□□□□□ -1.36
PRP40YKL012W LAM1P38851 1228 aa6.56□□□□□ -1.36
PRP40YKL012W IML2P47031 731 aa6.56□□□□□ -1.36
PRP40YKL012W SNO2P53823 222 aa6.56□□□□□ -1.36
PRP40YKL012W REC102Q02721 264 aa6.56□□□□□ -1.36
PRP40YKL012W RCR2Q03446 210 aaKnown RBP6.56□□□□□ -1.36
PRP40YKL012W BLS1Q06071 122 aa6.56□□□□□ -1.36
PRP40YKL012W MCM21Q06675 368 aa6.56□□□□□ -1.36
PRP40YKL012W MED7Q08278 222 aa6.56□□□□□ -1.36
PRP40YKL012W CDC6P09119 513 aa6.55□□□□□ -1.36
PRP40YKL012W ADH4P10127 382 aa6.55□□□□□ -1.36
PRP40YKL012W FRS1P15624 595 aaKnown RBP6.55□□□□□ -1.36
PRP40YKL012W ECM1P39715 212 aa6.55□□□□□ -1.36
PRP40YKL012W SSP120P39931 234 aaKnown RBP6.55□□□□□ -1.36
PRP40YKL012W YPL062WQ02781 134 aa6.55□□□□□ -1.36
PRP40YKL012W YOR352WQ08816 343 aa6.55□□□□□ -1.36
PRP40YKL012W BEM3P32873 1128 aa6.54□□□□□ -1.36
PRP40YKL012W LRG1P35688 1017 aa6.54□□□□□ -1.36
PRP40YKL012W YKR073CP36153 106 aa6.54□□□□□ -1.36
PRP40YKL012W SWD1P39706 426 aa6.54□□□□□ -1.36
PRP40YKL012W VPS62P53285 467 aa6.54□□□□□ -1.36
PRP40YKL012W NSE5Q03718 556 aa6.54□□□□□ -1.36
PRP40YKL012W HMO1Q03973 246 aaKnown RBP6.54□□□□□ -1.36
PRP40YKL012W VAS1P07806 1104 aaKnown RBP6.54□□□□□ -1.36
PRP40YKL012W EMC1P25574 760 aa6.54□□□□□ -1.36
PRP40YKL012W TAF5P38129 798 aa6.54□□□□□ -1.36
PRP40YKL012W APM3P38153 483 aa6.54□□□□□ -1.36
PRP40YKL012W MAD2P40958 196 aa6.54□□□□□ -1.36
PRP40YKL012W MAD3P47074 515 aa6.54□□□□□ -1.36
PRP40YKL012W GTR1Q00582 310 aa6.54□□□□□ -1.36
PRP40YKL012W DUS4Q06063 367 aa6.54□□□□□ -1.36
PRP40YKL012W GPB1Q08886 897 aa6.54□□□□□ -1.36
PRP40YKL012W RTK1Q12100 620 aaPredicted RBP6.54□□□□□ -1.36
PRP40YKL012W YPT7P32939 208 aa6.53□□□□□ -1.36
PRP40YKL012W APT2P36973 181 aa6.53□□□□□ -1.36
PRP40YKL012W TOS1P38288 455 aa6.53□□□□□ -1.36
PRP40YKL012W YHR112CP38716 378 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms