RNA–Protein interactions for RNA: YKL008C

LAC1, Transcript of Ceramide synthase component, yeast

Gene LAC1, Length 1,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAC1	YKL008C	HXT6	P39003	570 aa	Known RBP	5.53	□□□□□ -1.52
LAC1	YKL008C	HXT7	P39004	570 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	BEM4	P39011	633 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	HOS4	P40480	1083 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	MTL1	P53214	551 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	RNT1	Q02555	471 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	REC102	Q02721	264 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	CTK1	Q03957	528 aa	Known RBP	5.53	□□□□□ -1.52
LAC1	YKL008C	YHM2	Q04013	314 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	YOL073C	Q08232	322 aa		5.53	□□□□□ -1.52
LAC1	YKL008C	RPS21A	P0C0V8	87 aa	Known RBP	5.52	□□□□□ -1.53
LAC1	YKL008C	SEC65	P29478	273 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	DAL3	P32459	195 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	MSE1	P48525	536 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	YLR407W	Q06070	228 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	IRC13	Q08630	104 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	ATG11	Q12527	1178 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	ECM3	Q99252	613 aa		5.52	□□□□□ -1.53
LAC1	YKL008C	HRP1	Q99383	534 aa	Known RBP	5.52	□□□□□ -1.53
LAC1	YKL008C	IMG2	P25642	146 aa	Predicted RBP	5.51	□□□□□ -1.53
LAC1	YKL008C	HIS7	P33734	552 aa	Known RBP	5.51	□□□□□ -1.53
LAC1	YKL008C	LYS9	P38999	446 aa		5.51	□□□□□ -1.53
LAC1	YKL008C	YJL163C	P46996	555 aa		5.51	□□□□□ -1.53
LAC1	YKL008C	YMR210W	Q03649	449 aa		5.51	□□□□□ -1.53
LAC1	YKL008C	HMO1	Q03973	246 aa	Known RBP	5.51	□□□□□ -1.53
LAC1	YKL008C	ADY4	Q05955	493 aa		5.51	□□□□□ -1.53
LAC1	YKL008C	SGO1	Q08490	590 aa		5.51	□□□□□ -1.53
LAC1	YKL008C	PUS9	Q12069	462 aa		5.51	□□□□□ -1.53
LAC1	YKL008C	PPR1	P07272	904 aa	Predicted RBP	5.5	□□□□□ -1.53
LAC1	YKL008C	SWI6	P09959	803 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	YKU70	P32807	602 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	DID4	P36108	232 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	FAT1	P38225	669 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	GET2	P40056	285 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	BAP3	P41815	604 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	FOL1	P53848	824 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	PTA1	Q01329	785 aa	Predicted RBP	5.5	□□□□□ -1.53
LAC1	YKL008C	YMR206W	Q03695	313 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	HFI1	Q12060	488 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	SPA2	P23201	1466 aa	Known RBP	5.5	□□□□□ -1.53
LAC1	YKL008C	KOG1	P38873	1557 aa		5.5	□□□□□ -1.53
LAC1	YKL008C	OAF3	P36023	863 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	PPS1	P38148	807 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	BCD1	P38772	366 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	FMO1	P38866	432 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	NOP9	P47077	666 aa	Known RBP	5.49	□□□□□ -1.53
LAC1	YKL008C	RGC1	Q06108	1083 aa	Known RBP	5.49	□□□□□ -1.53
LAC1	YKL008C	YPS7	Q06325	596 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	URN1	Q06525	465 aa	Known RBP	5.49	□□□□□ -1.53
LAC1	YKL008C	VPS36	Q06696	566 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	VHS3	Q08438	674 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	TRE2	Q08693	809 aa		5.49	□□□□□ -1.53
LAC1	YKL008C	MVD1	P32377	396 aa	Known RBP	5.48	□□□□□ -1.53
LAC1	YKL008C	YBR071W	P38243	211 aa		5.48	□□□□□ -1.53
LAC1	YKL008C	CCT3	P39077	534 aa	Known RBP	5.48	□□□□□ -1.53
LAC1	YKL008C	DUG1	P43616	481 aa	Known RBP	5.48	□□□□□ -1.53
LAC1	YKL008C	UBC11	P52492	156 aa		5.48	□□□□□ -1.53
LAC1	YKL008C	NOP15	P53927	220 aa	Predicted RBP	5.48	□□□□□ -1.53
LAC1	YKL008C	GLN4	P13188	809 aa	Known RBP	5.47	□□□□□ -1.53
LAC1	YKL008C	FRS1	P15624	595 aa	Known RBP	5.47	□□□□□ -1.53
LAC1	YKL008C	PAF1	P38351	445 aa		5.47	□□□□□ -1.53
LAC1	YKL008C	NUP60	P39705	539 aa		5.47	□□□□□ -1.53
LAC1	YKL008C	GPP2	P40106	250 aa	Known RBP	5.47	□□□□□ -1.53
LAC1	YKL008C	RCR2	Q03446	210 aa	Known RBP	5.47	□□□□□ -1.53
LAC1	YKL008C	RMP1	Q12530	201 aa		5.47	□□□□□ -1.53
LAC1	YKL008C	RPS17A	P02407	136 aa	Known RBP	5.46	□□□□□ -1.54
LAC1	YKL008C	RPS17B	P14127	136 aa	Known RBP	5.46	□□□□□ -1.54
LAC1	YKL008C	PET127	P32606	800 aa		5.46	□□□□□ -1.54
LAC1	YKL008C	RSC8	P43609	557 aa	Known RBP	5.46	□□□□□ -1.54
LAC1	YKL008C	COG6	P53959	839 aa		5.46	□□□□□ -1.54
LAC1	YKL008C	GSF2	Q04697	403 aa	Known RBP	5.46	□□□□□ -1.54
LAC1	YKL008C	DIA2	Q08496	732 aa	Predicted RBP	5.46	□□□□□ -1.54
LAC1	YKL008C	APM4	Q99186	491 aa		5.46	□□□□□ -1.54
LAC1	YKL008C	ERG20	P08524	352 aa	Known RBP	5.45	□□□□□ -1.54
LAC1	YKL008C	AEP2	P22136	580 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	PEX1	P24004	1043 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	MRC1	P25588	1096 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	HIR1	P32479	840 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	SER1	P33330	395 aa	Known RBP	5.45	□□□□□ -1.54
LAC1	YKL008C	TOM20	P35180	183 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	SFB3	P38810	929 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	CHS7	P38843	316 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	DUN1	P39009	513 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	VID28	P40547	921 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	NIT2	P47016	307 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	PAN2	P53010	1115 aa	Predicted RBP	5.45	□□□□□ -1.54
LAC1	YKL008C	YPR027C	Q12079	277 aa		5.45	□□□□□ -1.54
LAC1	YKL008C	ENP1	P38333	483 aa	Known RBP	5.44	□□□□□ -1.54
LAC1	YKL008C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.44	□□□□□ -1.54	not detected
LAC1	YKL008C	REV7	P38927	245 aa		5.44	□□□□□ -1.54
LAC1	YKL008C	FMP52	P40008	231 aa		5.44	□□□□□ -1.54
LAC1	YKL008C	MUK1	Q02866	612 aa		5.44	□□□□□ -1.54
LAC1	YKL008C	IME1	P21190	360 aa		5.43	□□□□□ -1.54
LAC1	YKL008C	TFC4	P33339	1025 aa		5.43	□□□□□ -1.54
LAC1	YKL008C	BIT61	P47041	543 aa		5.43	□□□□□ -1.54
LAC1	YKL008C	SLI1	P53304	468 aa		5.43	□□□□□ -1.54
LAC1	YKL008C	SKY1	Q03656	742 aa		5.43	□□□□□ -1.54
LAC1	YKL008C	VBA4	Q04602	768 aa	Known RBP	5.43	□□□□□ -1.54
LAC1	YKL008C	THI22	Q06490	572 aa		5.43	□□□□□ -1.54
LAC1	YKL008C	STP4	Q07351	490 aa		5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms