RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SLX4Q12098 748 aa2.64□□□□□ -1.99
VPS35YJL154C RPS21BQ3E754 87 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C TUB3P09734 445 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C DGR2P32330 852 aa2.64□□□□□ -1.99
VPS35YJL154C DAL3P32459 195 aa2.64□□□□□ -1.99
VPS35YJL154C YKU70P32807 602 aa2.64□□□□□ -1.99
VPS35YJL154C ENP2P48234 707 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C BRE5P53741 515 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C CAF20P12962 161 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C PLC1P32383 869 aa2.63□□□□□ -1.99
VPS35YJL154C ELM1P32801 640 aa2.63□□□□□ -1.99
VPS35YJL154C CTF13P35203 478 aa2.63□□□□□ -1.99
VPS35YJL154C ECM1P39715 212 aa2.63□□□□□ -1.99
VPS35YJL154C NIT2P47016 307 aa2.63□□□□□ -1.99
VPS35YJL154C AMA1P50082 593 aa2.63□□□□□ -1.99
VPS35YJL154C PEX8P53248 589 aa2.63□□□□□ -1.99
VPS35YJL154C PPN1Q04119 674 aa2.63□□□□□ -1.99
VPS35YJL154C VBA4Q04602 768 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C HFI1Q12060 488 aa2.63□□□□□ -1.99
VPS35YJL154C BUD4P47136 1447 aa2.63□□□□□ -1.99
VPS35YJL154C RPS17AP02407 136 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C RPS17BP14127 136 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C ADE2P21264 571 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C IMG2P25642 146 aaPredicted RBP2.63□□□□□ -1.99
VPS35YJL154C LST4P34239 828 aa2.63□□□□□ -1.99
VPS35YJL154C NUG1P40010 520 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C GPP2P40106 250 aaKnown RBP2.63□□□□□ -1.99
VPS35YJL154C YIR042CP40586 236 aa2.63□□□□□ -1.99
VPS35YJL154C ARP4P80428 489 aa2.63□□□□□ -1.99
VPS35YJL154C ARG5,6Q01217 863 aa2.63□□□□□ -1.99
VPS35YJL154C YLR407WQ06070 228 aa2.63□□□□□ -1.99
VPS35YJL154C PEX15Q08215 383 aa2.63□□□□□ -1.99
VPS35YJL154C TGL5Q12043 749 aa2.63□□□□□ -1.99
VPS35YJL154C RPS21AP0C0V8 87 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C PRP22P24384 1145 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C HIS7P33734 552 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C AKL1P38080 1108 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C TPM2P40414 161 aa2.62□□□□□ -1.99
VPS35YJL154C CLU1Q03690 1277 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C ATG11Q12527 1178 aa2.62□□□□□ -1.99
VPS35YJL154C MPD2Q99316 277 aa2.62□□□□□ -1.99
VPS35YJL154C BNI1P41832 1953 aa2.62□□□□□ -1.99
VPS35YJL154C GLT1Q12680 2145 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C SWI6P09959 803 aa2.62□□□□□ -1.99
VPS35YJL154C PRP4P20053 465 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C HCM1P25364 564 aa2.62□□□□□ -1.99
VPS35YJL154C PET127P32606 800 aa2.62□□□□□ -1.99
VPS35YJL154C NIC96P34077 839 aa2.62□□□□□ -1.99
VPS35YJL154C RIM4P38741 713 aa2.62□□□□□ -1.99
VPS35YJL154C HXT6P39003 570 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C HXT7P39004 570 aa2.62□□□□□ -1.99
VPS35YJL154C VID28P40547 921 aa2.62□□□□□ -1.99
VPS35YJL154C NOP15P53927 220 aaPredicted RBP2.62□□□□□ -1.99
VPS35YJL154C VMS1Q04311 632 aaKnown RBP2.62□□□□□ -1.99
VPS35YJL154C APM4Q99186 491 aa2.62□□□□□ -1.99
VPS35YJL154C GLN4P13188 809 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C KIN82P25341 720 aa2.61□□□□□ -1.99
VPS35YJL154C MVD1P32377 396 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C SEC6P32844 805 aa2.61□□□□□ -1.99
VPS35YJL154C YKL133CP36066 463 aa2.61□□□□□ -1.99
VPS35YJL154C YHR033WP38690 423 aa2.61□□□□□ -1.99
VPS35YJL154C BEM4P39011 633 aa2.61□□□□□ -1.99
VPS35YJL154C UBP5P39944 805 aa2.61□□□□□ -1.99
VPS35YJL154C ELO3P40319 345 aa2.61□□□□□ -1.99
VPS35YJL154C PXA1P41909 870 aa2.61□□□□□ -1.99
VPS35YJL154C MUP1P50276 574 aa2.61□□□□□ -1.99
VPS35YJL154C SQS1P53866 767 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C ECM3Q99252 613 aa2.61□□□□□ -1.99
VPS35YJL154C TRP4P07285 380 aaPredicted RBP2.61□□□□□ -1.99
VPS35YJL154C LAT1P12695 482 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C FRS1P15624 595 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C RNR1P21524 888 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C HRR25P29295 494 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C HIR1P32479 840 aa2.61□□□□□ -1.99
VPS35YJL154C YHR112CP38716 378 aa2.61□□□□□ -1.99
VPS35YJL154C REV7P38927 245 aa2.61□□□□□ -1.99
VPS35YJL154C SAW1P39735 261 aa2.61□□□□□ -1.99
VPS35YJL154C IRC24P40580 263 aa2.61□□□□□ -1.99
VPS35YJL154C LEE1Q02799 301 aaKnown RBP2.61□□□□□ -1.99
VPS35YJL154C BPT1P14772 1559 aa2.61□□□□□ -1.99
VPS35YJL154C SST2P11972 698 aaKnown RBP2.6□□□□□ -1.99
VPS35YJL154C TEX1P53851 422 aaKnown RBP2.6□□□□□ -1.99
VPS35YJL154C ESC1Q03661 1658 aaKnown RBP2.6□□□□□ -1.99
VPS35YJL154C ATP4P05626 244 aa2.6□□□□□ -1.99
VPS35YJL154C EFT1P32324 842 aaKnown RBP2.6□□□□□ -1.99
VPS35YJL154C HEM12P32347 362 aaPredicted RBP2.6□□□□□ -1.99
VPS35YJL154C FAT1P38225 669 aa2.6□□□□□ -1.99
VPS35YJL154C YNL195CP40168 261 aa2.6□□□□□ -1.99
VPS35YJL154C MDR1P53258 950 aa2.6□□□□□ -1.99
VPS35YJL154C YNL034WP53963 612 aa2.6□□□□□ -1.99
VPS35YJL154C YNL018CP53976 612 aa2.6□□□□□ -1.99
VPS35YJL154C CLF1Q12309 687 aaPredicted RBP2.6□□□□□ -1.99
VPS35YJL154C GPR1Q12361 961 aa2.6□□□□□ -1.99
VPS35YJL154C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99 RIP-Chip
VPS35YJL154C SDS22P36047 338 aa2.6□□□□□ -1.99
VPS35YJL154C SHM2P37291 469 aaKnown RBP2.6□□□□□ -1.99
VPS35YJL154C KTR4P38131 464 aa2.6□□□□□ -1.99
VPS35YJL154C CCT3P39077 534 aaKnown RBP2.6□□□□□ -1.99
VPS35YJL154C PIG2P40187 538 aa2.6□□□□□ -1.99
VPS35YJL154C RSC8P43609 557 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms