RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C BUG1Q12191 341 aa5.95□□□□□ -1.46
SFB3YHR098C NUC1P08466 329 aa5.94□□□□□ -1.46
SFB3YHR098C HEM1P09950 548 aaPredicted RBP5.94□□□□□ -1.46
SFB3YHR098C URA4P20051 364 aa5.94□□□□□ -1.46
SFB3YHR098C OSM1P21375 501 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C GPI10P30777 616 aa5.94□□□□□ -1.46
SFB3YHR098C BMH2P34730 273 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C YJL049WP47048 450 aa5.94□□□□□ -1.46
SFB3YHR098C SGM1P47166 707 aa5.94□□□□□ -1.46
SFB3YHR098C DAN4P47179 1161 aa5.94□□□□□ -1.46
SFB3YHR098C USE1P53146 245 aa5.94□□□□□ -1.46
SFB3YHR098C DCP2P53550 970 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C HDA1P53973 706 aa5.94□□□□□ -1.46
SFB3YHR098C FIN1Q03898 291 aa5.94□□□□□ -1.46
SFB3YHR098C TAF3Q12297 353 aa5.94□□□□□ -1.46
SFB3YHR098C POL30P15873 258 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C SEC18P18759 758 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C SMY1P32364 656 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C ISF1P32488 338 aa5.94□□□□□ -1.46
SFB3YHR098C SMC1P32908 1225 aa5.94□□□□□ -1.46
SFB3YHR098C YCK3P39962 524 aa5.94□□□□□ -1.46
SFB3YHR098C MMM1P41800 426 aa5.94□□□□□ -1.46
SFB3YHR098C ATP22P50273 684 aaPredicted RBP5.94□□□□□ -1.46
SFB3YHR098C YGR021WP53212 290 aa5.94□□□□□ -1.46
SFB3YHR098C SLU7Q02775 382 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C CDC53Q12018 815 aaKnown RBP5.94□□□□□ -1.46
SFB3YHR098C NBL1Q3E7Y6 73 aa5.94□□□□□ -1.46
SFB3YHR098C YPT6Q99260 215 aa5.94□□□□□ -1.46
SFB3YHR098C RAD61Q99359 647 aa5.94□□□□□ -1.46
SFB3YHR098C ERR1P0CX10 437 aa5.93□□□□□ -1.46
SFB3YHR098C ERR2P0CX11 437 aa5.93□□□□□ -1.46
SFB3YHR098C HSC82P15108 705 aaKnown RBP5.93□□□□□ -1.46
SFB3YHR098C URE2P23202 354 aaKnown RBP5.93□□□□□ -1.46
SFB3YHR098C PLC1P32383 869 aa5.93□□□□□ -1.46
SFB3YHR098C GDA1P32621 518 aa5.93□□□□□ -1.46
SFB3YHR098C MAL31P38156 614 aa5.93□□□□□ -1.46
SFB3YHR098C UBP13P38187 747 aa5.93□□□□□ -1.46
SFB3YHR098C ECM2P38241 364 aaKnown RBP5.93□□□□□ -1.46
SFB3YHR098C CRG1P38892 291 aaRIP-Chip data5.93□□□□□ -1.46not detected
SFB3YHR098C JJJ2P46997 583 aa5.93□□□□□ -1.46
SFB3YHR098C ZIP2P53061 704 aa5.93□□□□□ -1.46
SFB3YHR098C YGR054WP53235 642 aaKnown RBP5.93□□□□□ -1.46
SFB3YHR098C TOF1P53840 1238 aa5.93□□□□□ -1.46
SFB3YHR098C SYF1Q04048 859 aaPredicted RBP5.93□□□□□ -1.46
SFB3YHR098C UTP14Q04500 899 aaKnown RBP5.93□□□□□ -1.46
SFB3YHR098C ARP9Q05123 467 aa5.93□□□□□ -1.46
SFB3YHR098C YLR125WQ12138 136 aa5.93□□□□□ -1.46
SFB3YHR098C SCM3Q12334 223 aa5.93□□□□□ -1.46
SFB3YHR098C SMY2P32909 740 aaKnown RBP5.93□□□□□ -1.46
SFB3YHR098C RCN1P36054 211 aa5.93□□□□□ -1.46
SFB3YHR098C SLM4P38247 162 aa5.93□□□□□ -1.46
SFB3YHR098C CAB2P40506 365 aa5.93□□□□□ -1.46
SFB3YHR098C MRM2P53123 320 aa5.93□□□□□ -1.46
SFB3YHR098C TMA20P89886 181 aaPredicted RBP5.93□□□□□ -1.46
SFB3YHR098C UBP16Q02863 499 aa5.93□□□□□ -1.46
SFB3YHR098C RCF1Q03713 159 aa5.93□□□□□ -1.46
SFB3YHR098C GIS4Q04233 774 aa5.93□□□□□ -1.46
SFB3YHR098C UIP4Q08926 304 aa5.93□□□□□ -1.46
SFB3YHR098C TIP41Q12199 356 aa5.93□□□□□ -1.46
SFB3YHR098C ERP4Q12450 207 aa5.93□□□□□ -1.46
SFB3YHR098C HSF1P10961 833 aa5.92□□□□□ -1.46
SFB3YHR098C MSH2P25847 964 aa5.92□□□□□ -1.46
SFB3YHR098C NIP100P33420 868 aa5.92□□□□□ -1.46
SFB3YHR098C TBS1P38114 1094 aa5.92□□□□□ -1.46
SFB3YHR098C PPS1P38148 807 aa5.92□□□□□ -1.46
SFB3YHR098C PFF1P38244 976 aa5.92□□□□□ -1.46
SFB3YHR098C YBP1P38315 674 aa5.92□□□□□ -1.46
SFB3YHR098C AST2P39945 430 aaKnown RBP5.92□□□□□ -1.46
SFB3YHR098C MAL11P53048 616 aa5.92□□□□□ -1.46
SFB3YHR098C MDM1Q01846 1127 aa5.92□□□□□ -1.46
SFB3YHR098C FCP1Q03254 732 aa5.92□□□□□ -1.46
SFB3YHR098C HMO1Q03973 246 aaKnown RBP5.92□□□□□ -1.46
SFB3YHR098C REP1P03871 373 aa5.92□□□□□ -1.46
SFB3YHR098C SEC21P32074 935 aaKnown RBP5.92□□□□□ -1.46
SFB3YHR098C FRD1P32614 470 aaKnown RBP5.92□□□□□ -1.46
SFB3YHR098C NUP120P35729 1037 aa5.92□□□□□ -1.46
SFB3YHR098C DPH1P40487 425 aaKnown RBP5.92□□□□□ -1.46
SFB3YHR098C BNA1P47096 177 aa5.92□□□□□ -1.46
SFB3YHR098C PTK2P47116 818 aaKnown RBP5.92□□□□□ -1.46
SFB3YHR098C UBP15P50101 1230 aa5.92□□□□□ -1.46
SFB3YHR098C MRPL25P23369 157 aa5.91□□□□□ -1.46
SFB3YHR098C STE5P32917 917 aa5.91□□□□□ -1.46
SFB3YHR098C RPT1P33299 467 aaKnown RBP5.91□□□□□ -1.46
SFB3YHR098C YKL050CP35736 922 aa5.91□□□□□ -1.46
SFB3YHR098C APL2P36000 726 aaPredicted RBP5.91□□□□□ -1.46
SFB3YHR098C TPO5P36029 618 aa5.91□□□□□ -1.46
SFB3YHR098C YBR242WP38331 238 aa5.91□□□□□ -1.46
SFB3YHR098C RCK2P38623 610 aa5.91□□□□□ -1.46
SFB3YHR098C PIK1P39104 1066 aa5.91□□□□□ -1.46
SFB3YHR098C PES4P39684 611 aa5.91□□□□□ -1.46
SFB3YHR098C SPC72P39723 622 aa5.91□□□□□ -1.46
SFB3YHR098C AVT6P40074 448 aa5.91□□□□□ -1.46
SFB3YHR098C PCI8P40512 444 aa5.91□□□□□ -1.46
SFB3YHR098C MKT1P40850 830 aaKnown RBP5.91□□□□□ -1.46
SFB3YHR098C POL31P46957 487 aa5.91□□□□□ -1.46
SFB3YHR098C RNR4P49723 345 aaKnown RBP5.91□□□□□ -1.46
SFB3YHR098C UTP6Q02354 440 aaKnown RBP5.91□□□□□ -1.46
SFB3YHR098C TDA9Q04545 1251 aa5.91□□□□□ -1.46
SFB3YHR098C MCP2Q06567 569 aa5.91□□□□□ -1.46
SFB3YHR098C MCM21Q06675 368 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms