RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	YJR054W	P47114	497 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	UBA2	P52488	636 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	COQ6	P53318	479 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	HXT17	P53631	564 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	NAM8	Q00539	523 aa	Known RBP	6.05	□□□□□ -1.44
RSC30	YHR056C	RLP24	Q07915	199 aa	Known RBP	6.05	□□□□□ -1.44
RSC30	YHR056C	SPT5	P27692	1063 aa	Known RBP	6.04	□□□□□ -1.44
RSC30	YHR056C	RAM2	P29703	316 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	SGE1	P33335	543 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	SIF2	P38262	535 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	SAK1	P38990	1142 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	ERG10	P41338	398 aa	Known RBP	6.04	□□□□□ -1.44
RSC30	YHR056C	KRI1	P42846	591 aa	Known RBP	6.04	□□□□□ -1.44
RSC30	YHR056C	VPS70	P47161	811 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	YGR266W	P53326	701 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	ADY4	Q05955	493 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	ISY1	P21374	235 aa	Predicted RBP	6.04	□□□□□ -1.44
RSC30	YHR056C	FRE1	P32791	686 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	WSC4	P38739	605 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	DSE1	P40077	573 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	GCN5	Q03330	439 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	DCS2	Q12123	353 aa		6.04	□□□□□ -1.44
RSC30	YHR056C	PGI1	P12709	554 aa	Known RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	WBP1	P33767	430 aa	Known RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	CSL4	P53859	292 aa	Predicted RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	RTN1	Q04947	295 aa	Known RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	YPR027C	Q12079	277 aa		6.03	□□□□□ -1.44
RSC30	YHR056C	COX3	P00420	269 aa		6.03	□□□□□ -1.44
RSC30	YHR056C	MSF1	P08425	469 aa		6.03	□□□□□ -1.44
RSC30	YHR056C	PTP1	P25044	335 aa		6.03	□□□□□ -1.44
RSC30	YHR056C	PYC2	P32327	1180 aa	Known RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	MUD1	P32605	298 aa	Known RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	STE13	P33894	931 aa		6.03	□□□□□ -1.44
RSC30	YHR056C	CRP1	P38845	465 aa	Known RBP	6.03	□□□□□ -1.44
RSC30	YHR056C	HXT13	P39924	564 aa		6.03	□□□□□ -1.44
RSC30	YHR056C	ERG6	P25087	383 aa	Known RBP	6.02	□□□□□ -1.44
RSC30	YHR056C	YBR238C	P38330	731 aa	Known RBP	6.02	□□□□□ -1.44
RSC30	YHR056C	GUF1	P46943	645 aa		6.02	□□□□□ -1.44
RSC30	YHR056C	PYK2	P52489	506 aa	Known RBP	6.02	□□□□□ -1.44
RSC30	YHR056C	YNL011C	P53980	444 aa		6.02	□□□□□ -1.44
RSC30	YHR056C	CSR1	Q06705	408 aa	Known RBP	6.02	□□□□□ -1.44
RSC30	YHR056C	YOL098C	Q12496	1037 aa		6.02	□□□□□ -1.44
RSC30	YHR056C	CHS1	P08004	1131 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	COX11	P19516	300 aa	Known RBP	6.02	□□□□□ -1.45
RSC30	YHR056C	SSP1	P38871	571 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	DUN1	P39009	513 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	AVT2	P39981	480 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	RSM25	P40496	264 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	FET5	P43561	622 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	HSH155	P49955	971 aa	Known RBP	6.02	□□□□□ -1.45
RSC30	YHR056C	RPA49	Q01080	415 aa	Predicted RBP	6.02	□□□□□ -1.45
RSC30	YHR056C	MTD1	Q02046	320 aa	Known RBP	6.02	□□□□□ -1.45
RSC30	YHR056C	YMR187C	Q03236	431 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	PYC1	P11154	1178 aa	Known RBP	6.02	□□□□□ -1.45
RSC30	YHR056C	COQ5	P49017	307 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	RSC1	P53236	928 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	YOR389W	Q08912	624 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	YPL278C	Q08990	100 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	PTC5	Q12511	572 aa		6.02	□□□□□ -1.45
RSC30	YHR056C	HSP82	P02829	709 aa	Known RBP	6.01	□□□□□ -1.45
RSC30	YHR056C	ADE3	P07245	946 aa	Known RBP	6.01	□□□□□ -1.45
RSC30	YHR056C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.01	□□□□□ -1.45	not detected
RSC30	YHR056C	YKL151C	P36059	337 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	TTI1	P36097	1038 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	PET10	P36139	283 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	SMA1	Q02651	245 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	MZM1	Q03429	123 aa	Predicted RBP	6.01	□□□□□ -1.45
RSC30	YHR056C	RIP1	P08067	215 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	DAL1	P32375	460 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	UBS1	P38290	277 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	SUM1	P46676	1062 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	MUB1	Q03162	620 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	TSR1	Q07381	788 aa	Known RBP	6.01	□□□□□ -1.45
RSC30	YHR056C	ALR1	Q08269	859 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	NBP2	Q12163	236 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	MED1	Q12321	566 aa		6.01	□□□□□ -1.45
RSC30	YHR056C	TRL1	P09880	827 aa	Known RBP	6	□□□□□ -1.45
RSC30	YHR056C	PPE1	P38796	400 aa		6	□□□□□ -1.45
RSC30	YHR056C	ERV46	P39727	415 aa		6	□□□□□ -1.45
RSC30	YHR056C	PEX14	P53112	341 aa		6	□□□□□ -1.45
RSC30	YHR056C	EIS1	Q05050	843 aa	Known RBP	6	□□□□□ -1.45
RSC30	YHR056C	ECM38	Q05902	660 aa	Predicted RBP	6	□□□□□ -1.45
RSC30	YHR056C	TCO89	Q08921	799 aa		6	□□□□□ -1.45
RSC30	YHR056C	LPX1	Q12405	387 aa	Known RBP	6	□□□□□ -1.45
RSC30	YHR056C	GAL4	P04386	881 aa		6	□□□□□ -1.45
RSC30	YHR056C	GAL10	P04397	699 aa		6	□□□□□ -1.45
RSC30	YHR056C	CHL1	P22516	861 aa	Predicted RBP	6	□□□□□ -1.45
RSC30	YHR056C	STE5	P32917	917 aa		6	□□□□□ -1.45
RSC30	YHR056C	EXO1	P39875	702 aa		6	□□□□□ -1.45
RSC30	YHR056C	UFE1	P41834	346 aa		6	□□□□□ -1.45
RSC30	YHR056C	YLR456W	Q06199	204 aa		6	□□□□□ -1.45
RSC30	YHR056C	RNR2	P09938	399 aa	Known RBP	5.99	□□□□□ -1.45
RSC30	YHR056C	NOP4	P37838	685 aa	Known RBP	5.99	□□□□□ -1.45
RSC30	YHR056C	YBR056W	P38081	501 aa		5.99	□□□□□ -1.45
RSC30	YHR056C	AGP2	P38090	596 aa		5.99	□□□□□ -1.45
RSC30	YHR056C	MRX6	P48564	524 aa		5.99	□□□□□ -1.45
RSC30	YHR056C	YSH1	Q06224	779 aa	Predicted RBP	5.99	□□□□□ -1.45
RSC30	YHR056C	RPN8	Q08723	338 aa	Known RBP	5.99	□□□□□ -1.45
RSC30	YHR056C	ELG1	Q12050	791 aa		5.99	□□□□□ -1.45
RSC30	YHR056C	ENO2	P00925	437 aa	Known RBP	5.99	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms