RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C WSC4P38739 605 aa8.86□□□□□ -0.99
SOD2YHR008C AVT2P39981 480 aa8.86□□□□□ -0.99
SOD2YHR008C HEM14P40012 539 aa8.86□□□□□ -0.99
SOD2YHR008C DAK2P43550 591 aa8.86□□□□□ -0.99
SOD2YHR008C FAR11P53917 953 aa8.86□□□□□ -0.99
SOD2YHR008C ECM22Q05958 814 aaPredicted RBP8.86□□□□□ -0.99
SOD2YHR008C TSR3Q12094 313 aaKnown RBP8.86□□□□□ -0.99
SOD2YHR008C DAL1P32375 460 aa8.85□□□□□ -0.99
SOD2YHR008C FRE1P32791 686 aa8.85□□□□□ -0.99
SOD2YHR008C UME6P39001 836 aa8.85□□□□□ -0.99
SOD2YHR008C YJR061WP40355 935 aa8.85□□□□□ -0.99
SOD2YHR008C YGL036WP53185 909 aaPredicted RBP8.85□□□□□ -0.99
SOD2YHR008C CLU1Q03690 1277 aaKnown RBP8.85□□□□□ -0.99
SOD2YHR008C TSR1Q07381 788 aaKnown RBP8.85□□□□□ -0.99
SOD2YHR008C RTK1Q12100 620 aaPredicted RBP8.85□□□□□ -0.99
SOD2YHR008C RGR1P19263 1082 aa8.84□□□□□ -0.99
SOD2YHR008C DSS4P32601 143 aa8.84□□□□□ -0.99
SOD2YHR008C YEL1P34225 687 aa8.84□□□□□ -0.99
SOD2YHR008C FHL1P39521 936 aa8.84□□□□□ -0.99
SOD2YHR008C FTR1P40088 404 aa8.84□□□□□ -0.99
SOD2YHR008C IML2P47031 731 aa8.84□□□□□ -0.99
SOD2YHR008C COQ6P53318 479 aa8.84□□□□□ -0.99
SOD2YHR008C PSK2Q08217 1101 aa8.84□□□□□ -0.99
SOD2YHR008C MUD1P32605 298 aaKnown RBP8.83□□□□□ -1
SOD2YHR008C PPS1P38148 807 aa8.83□□□□□ -1
SOD2YHR008C DUG1P43616 481 aaKnown RBP8.83□□□□□ -1
SOD2YHR008C NAM8Q00539 523 aaKnown RBP8.83□□□□□ -1
SOD2YHR008C MTD1Q02046 320 aaKnown RBP8.83□□□□□ -1
SOD2YHR008C SAM3Q08986 587 aa8.83□□□□□ -1
SOD2YHR008C DUN1P39009 513 aa8.82□□□□□ -1
SOD2YHR008C KAP123P40069 1113 aaKnown RBP8.82□□□□□ -1
SOD2YHR008C DSE1P40077 573 aa8.82□□□□□ -1
SOD2YHR008C YAP5P40574 245 aa8.82□□□□□ -1
SOD2YHR008C YFL034WP43564 1073 aa8.82□□□□□ -1
SOD2YHR008C SMC3P47037 1230 aa8.82□□□□□ -1
SOD2YHR008C FLC3P53121 802 aa8.82□□□□□ -1
SOD2YHR008C MUB1Q03162 620 aa8.82□□□□□ -1
SOD2YHR008C LPX1Q12405 387 aaKnown RBP8.82□□□□□ -1
SOD2YHR008C PRP8P33334 2413 aaKnown RBP8.81□□□□□ -1
SOD2YHR008C WBP1P33767 430 aaKnown RBP8.81□□□□□ -1
SOD2YHR008C STE13P33894 931 aa8.81□□□□□ -1
SOD2YHR008C GUF1P46943 645 aa8.81□□□□□ -1
SOD2YHR008C SPO21Q12411 609 aa8.81□□□□□ -1
SOD2YHR008C PIN4P34217 668 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
SOD2YHR008C PPE1P38796 400 aa8.8□□□□□ -1
SOD2YHR008C YJR054WP47114 497 aa8.8□□□□□ -1
SOD2YHR008C DON1Q05610 365 aa8.8□□□□□ -1
SOD2YHR008C DAL7P21826 554 aa8.79□□□□□ -1
SOD2YHR008C RML2P32611 393 aa8.79□□□□□ -1
SOD2YHR008C YPS6P40583 537 aa8.79□□□□□ -1
SOD2YHR008C YGR266WP53326 701 aa8.79□□□□□ -1
SOD2YHR008C NBP2Q12163 236 aa8.79□□□□□ -1
SOD2YHR008C GIS3Q12418 502 aa8.79□□□□□ -1
SOD2YHR008C HSP78P33416 811 aa8.78□□□□□ -1
SOD2YHR008C DCW1P36091 449 aa8.78□□□□□ -1
SOD2YHR008C GEM1P39722 662 aa8.78□□□□□ -1
SOD2YHR008C LCB2P40970 561 aa8.78□□□□□ -1
SOD2YHR008C NBP1P52919 319 aaPredicted RBP8.78□□□□□ -1
SOD2YHR008C CSL4P53859 292 aaPredicted RBP8.78□□□□□ -1
SOD2YHR008C PEX13P80667 386 aa8.78□□□□□ -1
SOD2YHR008C YMR187CQ03236 431 aa8.78□□□□□ -1
SOD2YHR008C RTN1Q04947 295 aaKnown RBP8.78□□□□□ -1
SOD2YHR008C YOR387CQ08910 206 aa8.78□□□□□ -1
SOD2YHR008C GAL10P04397 699 aa8.77□□□□□ -1.01
SOD2YHR008C ECM13P38195 257 aa8.77□□□□□ -1.01
SOD2YHR008C YBR238CP38330 731 aaKnown RBP8.77□□□□□ -1.01
SOD2YHR008C UFE1P41834 346 aa8.77□□□□□ -1.01
SOD2YHR008C CTF18P49956 741 aa8.77□□□□□ -1.01
SOD2YHR008C PYK2P52489 506 aaKnown RBP8.77□□□□□ -1.01
SOD2YHR008C VEL1P53058 206 aa8.77□□□□□ -1.01
SOD2YHR008C PIL1P53252 339 aaKnown RBP8.77□□□□□ -1.01
SOD2YHR008C HIS4P00815 799 aaKnown RBP8.76□□□□□ -1.01
SOD2YHR008C RAD3P06839 778 aa8.76□□□□□ -1.01
SOD2YHR008C ADE3P07245 946 aaKnown RBP8.76□□□□□ -1.01
SOD2YHR008C PGI1P12709 554 aaKnown RBP8.76□□□□□ -1.01
SOD2YHR008C PRP9P19736 530 aaKnown RBP8.76□□□□□ -1.01
SOD2YHR008C RNR1P21524 888 aaKnown RBP8.76□□□□□ -1.01
SOD2YHR008C SGE1P33335 543 aa8.76□□□□□ -1.01
SOD2YHR008C PFS1P38872 237 aa8.76□□□□□ -1.01
SOD2YHR008C ERV46P39727 415 aa8.76□□□□□ -1.01
SOD2YHR008C SUM1P46676 1062 aa8.76□□□□□ -1.01
SOD2YHR008C MZM1Q03429 123 aaPredicted RBP8.76□□□□□ -1.01
SOD2YHR008C CLP1Q08685 445 aaPredicted RBP8.76□□□□□ -1.01
SOD2YHR008C TEC1P18412 486 aa8.75□□□□□ -1.01
SOD2YHR008C SNF5P18480 905 aa8.75□□□□□ -1.01
SOD2YHR008C SWI3P32591 825 aa8.75□□□□□ -1.01
SOD2YHR008C MRPL40P36534 297 aa8.75□□□□□ -1.01
SOD2YHR008C RFC5P38251 354 aa8.75□□□□□ -1.01
SOD2YHR008C CRP1P38845 465 aaKnown RBP8.75□□□□□ -1.01
SOD2YHR008C SAK1P38990 1142 aa8.75□□□□□ -1.01
SOD2YHR008C COQ5P49017 307 aa8.75□□□□□ -1.01
SOD2YHR008C YLR456WQ06199 204 aa8.75□□□□□ -1.01
SOD2YHR008C ABP140Q08641 628 aaKnown RBP8.75□□□□□ -1.01
SOD2YHR008C ELG1Q12050 791 aa8.75□□□□□ -1.01
SOD2YHR008C CSF1Q12150 2958 aa8.75□□□□□ -1.01
SOD2YHR008C COX3P00420 269 aa8.74□□□□□ -1.01
SOD2YHR008C ERG6P25087 383 aaKnown RBP8.74□□□□□ -1.01
SOD2YHR008C URA1P28272 314 aaPredicted RBP8.74□□□□□ -1.01
SOD2YHR008C EFB1P32471 206 aaKnown RBP8.74□□□□□ -1.01
SOD2YHR008C YKL023WP36103 277 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms