RNA–Protein interactions for RNA: YGL078C

DBP3, Transcript of RNA-Dependent ATPase, member of DExD/H-box family, yeast

Gene DBP3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP3	YGL078C	YLR125W	Q12138	136 aa		4.38	□□□□□ -1.71
DBP3	YGL078C	NKP1	Q12493	238 aa		4.38	□□□□□ -1.71
DBP3	YGL078C	TY1B-A	O13527	1196 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	SOD2	P00447	233 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	SWI6	P09959	803 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	CDC60	P26637	1090 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	DPB3	P27344	201 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	BRF1	P29056	596 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	YEL043W	P32618	956 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	TFC3	P34111	1160 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	TIF3	P34167	436 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	RPC37	P36121	282 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	YBR238C	P38330	731 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	AIM20	P40451	204 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	TFG2	P41896	400 aa	Predicted RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	SPT20	P50875	604 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	SHE4	P51534	789 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	YKE2	P52553	114 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	RAI1	P53063	387 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	IST1	P53843	298 aa	Predicted RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	RIA1	P53893	1110 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	HEF3	P53978	1044 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	ASI1	P54074	624 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	SSL2	Q00578	843 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	RRB1	Q04225	511 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	CMS1	Q07897	291 aa	Known RBP	4.37	□□□□□ -1.71
DBP3	YGL078C	GPB1	Q08886	897 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	DRS2	P39524	1355 aa		4.37	□□□□□ -1.71
DBP3	YGL078C	ERR1	P0CX10	437 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	ERR2	P0CX11	437 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	PHO8	P11491	566 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	CLB4	P24871	460 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	PRD1	P25375	712 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	RAD16	P31244	790 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	PPG1	P32838	368 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	RAD5	P32849	1169 aa	Predicted RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	MUD2	P36084	527 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	CCT4	P39078	528 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	SEC9	P40357	651 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	YRB1	P41920	201 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	ALG2	P43636	503 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	MAL13	P53338	473 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	STE23	Q06010	1027 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	THI22	Q06490	572 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	YCG1	Q06680	1035 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	CDA1	Q06702	301 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	TPO1	Q07824	586 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	YPL277C	Q08989	487 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	SAC3	P46674	1301 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
DBP3	YGL078C	MPH2	P0CD99	609 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	PRP6	P19735	899 aa	Predicted RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	RPO26	P20435	155 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	BUD14	P27637	709 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	SWC3	P31376	625 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	NFU1	P32860	256 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	ATG19	P35193	415 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	YSW1	P38280	609 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	CAJ1	P39101	391 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	VPS8	P39702	1274 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	GCV2	P49095	1034 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	HSV2	P50079	448 aa	Predicted RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	SUB1	P54000	292 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	YDR338C	Q05497	695 aa		4.36	□□□□□ -1.71
DBP3	YGL078C	IMH1	Q06704	911 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	ABP140	Q08641	628 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	CHS5	Q12114	671 aa	Known RBP	4.36	□□□□□ -1.71
DBP3	YGL078C	DOP1	Q03921	1698 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	RPL19A	P0CX82	189 aa	Known RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	RPL19B	P0CX83	189 aa	Predicted RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	PRP16	P15938	1071 aa	Predicted RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	TPM1	P17536	199 aa	Known RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	CLN1	P20437	546 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	CDC10	P25342	322 aa	Known RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	THI4	P32318	326 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	LIN1	P38852	340 aa	Predicted RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	APT1	P49435	187 aa	Known RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	DAM1	P53267	343 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	YDR132C	Q03900	495 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	DUS4	Q06063	367 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	ACK1	Q07622	623 aa	Predicted RBP	4.35	□□□□□ -1.71
DBP3	YGL078C	ENV7	Q12003	364 aa		4.35	□□□□□ -1.71
DBP3	YGL078C	RPS9A	O13516	197 aa	Known RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	JIP3	O13555	125 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	MET6	P05694	767 aa	Known RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	VAS1	P07806	1104 aa	Known RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	SPE1	P08432	466 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	GCD2	P12754	651 aa	Predicted RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	PMR1	P13586	950 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	TAL1	P15019	335 aa	Known RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	KRS1	P15180	591 aa	Known RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
DBP3	YGL078C	RPL5	P26321	297 aa	Known RBP	4.34	□□□□□ -1.71
DBP3	YGL078C	STE13	P33894	931 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	TOD6	P34219	525 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	LHS1	P36016	881 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	GDH3	P39708	457 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	IRC24	P40580	263 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	MET12	P46151	657 aa		4.34	□□□□□ -1.71
DBP3	YGL078C	SET2	P46995	733 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms