RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	MUD2	P36084	527 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	RGD1	P38339	666 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	BSD2	P38356	321 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	SMC3	P47037	1230 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	SKP1	P52286	194 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	KAP114	P53067	1004 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	TAM41	P53230	385 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	YGR125W	P53273	1036 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	ZPR1	P53303	486 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	TIM8	P57744	87 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	HPF1	Q05164	967 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	NOP6	Q07623	225 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	NOC3	Q07896	663 aa	Predicted RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	YDR461C-A	Q2V2P7	80 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	ECM29	P38737	1868 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	EUG1	P32474	517 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SUP35	YDR172W	YSC83	P32792	385 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	CNS1	P33313	385 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	REG2	P38232	338 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	EXO5	P38289	585 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	VPS41	P38959	992 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	SDS3	P40505	327 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	VTI1	Q04338	217 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	SYT1	Q06836	1226 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	ISA1	Q07821	250 aa	Predicted RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	NUR1	Q12066	484 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	ERP3	Q12403	225 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	RAD1	P06777	1100 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	TCP1	P12612	559 aa	Known RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	RPB10	P22139	70 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	GCG1	P32656	232 aa	Known RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	ATG19	P35193	415 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	TRZ1	P36159	838 aa	Predicted RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	GDT1	P38301	280 aa	Predicted RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	HXT8	P40886	569 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	YGR021W	P53212	290 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	CUS1	Q02554	436 aa	Predicted RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	CUR1	Q06469	252 aa		5.03	□□□□□ -1.6
SUP35	YDR172W	TSR1	Q07381	788 aa	Known RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	RLP24	Q07915	199 aa	Known RBP	5.03	□□□□□ -1.6
SUP35	YDR172W	DED1	P06634	604 aa	Known RBP	5.02	□□□□□ -1.61
SUP35	YDR172W	TKL1	P23254	680 aa	Known RBP	5.02	□□□□□ -1.61
SUP35	YDR172W	MUD1	P32605	298 aa	Known RBP	5.02	□□□□□ -1.61
SUP35	YDR172W	LAS1	P36146	502 aa	Predicted RBP	5.02	□□□□□ -1.61
SUP35	YDR172W	CEM1	P39525	442 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	MAD1	P40957	749 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	ATG36	P46983	293 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	ATG1	P53104	897 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	ADE12	P80210	433 aa	Known RBP	5.02	□□□□□ -1.61
SUP35	YDR172W	SLD5	Q03406	294 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	ECI1	Q05871	280 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	YOR223W	Q12015	292 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	ZRT2	Q12436	422 aa		5.02	□□□□□ -1.61
SUP35	YDR172W	CDC8	P00572	216 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	IME1	P21190	360 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
SUP35	YDR172W	LDH1	P38139	375 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	DYS1	P38791	387 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	ERP5	P38819	212 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	KAP123	P40069	1113 aa	Known RBP	5.01	□□□□□ -1.61
SUP35	YDR172W	YNL320W	P42840	284 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	VPS53	P47061	822 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	COS5	P47187	383 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	BRO1	P48582	844 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	ESBP6	P53918	673 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	CEF1	Q03654	590 aa	Predicted RBP	5.01	□□□□□ -1.61
SUP35	YDR172W	SPO21	Q12411	609 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	HVG1	P0CE11	249 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	KIP1	P28742	1111 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	CBF2	P32504	956 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	SEC8	P32855	1065 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
SUP35	YDR172W	MSC7	P38694	644 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	TDA3	P38758	523 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	HMF1	P40037	129 aa	Known RBP	5.01	□□□□□ -1.61
SUP35	YDR172W	LCP5	P40079	357 aa	Predicted RBP	5.01	□□□□□ -1.61
SUP35	YDR172W	QDR1	P40475	563 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	HSH155	P49955	971 aa	Known RBP	5.01	□□□□□ -1.61
SUP35	YDR172W	LYS5	P50113	272 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	YGL140C	P53120	1219 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	YGR035C	P53222	116 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	YNR040W	P53736	256 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	ROD1	Q02805	837 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	SMC5	Q08204	1093 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	CDC53	Q12018	815 aa	Known RBP	5.01	□□□□□ -1.61
SUP35	YDR172W	YBL113C	Q7M4S9	792 aa		5.01	□□□□□ -1.61
SUP35	YDR172W	DAL2	P25335	343 aa		5	□□□□□ -1.61
SUP35	YDR172W	DEP1	P31385	405 aa		5	□□□□□ -1.61
SUP35	YDR172W	COT1	P32798	439 aa		5	□□□□□ -1.61
SUP35	YDR172W	TVP38	P36164	337 aa		5	□□□□□ -1.61
SUP35	YDR172W	RRT2	P38332	387 aa		5	□□□□□ -1.61
SUP35	YDR172W	RCK2	P38623	610 aa		5	□□□□□ -1.61
SUP35	YDR172W	YJR079W	P47126	109 aa		5	□□□□□ -1.61
SUP35	YDR172W	JJJ3	P47138	172 aa		5	□□□□□ -1.61
SUP35	YDR172W	RTT102	P53330	157 aa		5	□□□□□ -1.61
SUP35	YDR172W	JJJ1	P53863	590 aa		5	□□□□□ -1.61
SUP35	YDR172W	MRS2	Q01926	470 aa		5	□□□□□ -1.61
SUP35	YDR172W	VTC3	Q02725	835 aa		5	□□□□□ -1.61
SUP35	YDR172W	YMR018W	Q04364	514 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms