RNA–Protein interactions for RNA: YDR047W

HEM12, Transcript of Uroporphyrinogen decarboxylase, yeast

Gene HEM12, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEM12	YDR047W	ADE2	P21264	571 aa	Known RBP	11.46	□□□□□ -0.57
HEM12	YDR047W	EFB1	P32471	206 aa	Known RBP	11.46	□□□□□ -0.57
HEM12	YDR047W	NOP4	P37838	685 aa	Known RBP	11.46	□□□□□ -0.57
HEM12	YDR047W	YMC2	P38087	329 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	RGD1	P38339	666 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	CBR1	P38626	284 aa	Known RBP	11.46	□□□□□ -0.57
HEM12	YDR047W	VPS41	P38959	992 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	TMN3	P40071	706 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	ALT1	P52893	592 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	YGL036W	P53185	909 aa	Predicted RBP	11.46	□□□□□ -0.57
HEM12	YDR047W	ALG11	P53954	548 aa	Known RBP	11.46	□□□□□ -0.57
HEM12	YDR047W	IVY1	Q04934	453 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	SRF1	Q12516	437 aa		11.46	□□□□□ -0.57
HEM12	YDR047W	PLC1	P32383	869 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	MSG5	P38590	489 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	LAM5	P43560	674 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	YJR079W	P47126	109 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	INP52	P50942	1183 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	NOG2	P53742	486 aa	Known RBP	11.45	□□□□□ -0.58
HEM12	YDR047W	MRS2	Q01926	470 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	SXM1	Q04175	944 aa	Known RBP	11.45	□□□□□ -0.58
HEM12	YDR047W	YOR059C	Q08448	450 aa	Known RBP	11.45	□□□□□ -0.58
HEM12	YDR047W	YOR223W	Q12015	292 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	SUT2	Q12286	268 aa		11.45	□□□□□ -0.58
HEM12	YDR047W	TUB3	P09734	445 aa	Known RBP	11.44	□□□□□ -0.58
HEM12	YDR047W	ADH4	P10127	382 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	KAR3	P17119	729 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	BUD2	P33314	1104 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	APM2	P38700	605 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	QNS1	P38795	714 aa	Known RBP	11.44	□□□□□ -0.58
HEM12	YDR047W	YER186C	P40101	306 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	PSF2	P40359	213 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	INA22	P40576	216 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	SAP185	P40856	1058 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	PXA1	P41909	870 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	SNZ3	P43545	298 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	PRY3	P47033	881 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	MND1	P53102	219 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	SNZ2	P53824	298 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	YPR027C	Q12079	277 aa		11.44	□□□□□ -0.58
HEM12	YDR047W	PUS1	Q12211	544 aa	Known RBP	11.44	□□□□□ -0.58
HEM12	YDR047W	JIP3	O13555	125 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	ADE4	P04046	510 aa	Known RBP	11.43	□□□□□ -0.58
HEM12	YDR047W	SPO16	P17122	198 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	MRP4	P32902	394 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	DUR3	P33413	735 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	RPC37	P36121	282 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	11.43	□□□□□ -0.58	not detected
HEM12	YDR047W	PCA1	P38360	1216 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	PCM1	P38628	557 aa	Known RBP	11.43	□□□□□ -0.58
HEM12	YDR047W	YAP1801	P38856	637 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	YMR134W	P40207	237 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	YJR054W	P47114	497 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	MUK1	Q02866	612 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	SEY1	Q99287	776 aa		11.43	□□□□□ -0.58
HEM12	YDR047W	ARG4	P04076	463 aa	Predicted RBP	11.42	□□□□□ -0.58
HEM12	YDR047W	PEP5	P12868	1029 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	TRX1	P22217	103 aa	Known RBP	11.42	□□□□□ -0.58
HEM12	YDR047W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
HEM12	YDR047W	YME1	P32795	747 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	VHC1	P38329	1120 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	CCT2	P39076	527 aa	Known RBP	11.42	□□□□□ -0.58
HEM12	YDR047W	GEM1	P39722	662 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	YML6	P51998	286 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	YGR130C	P53278	816 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
HEM12	YDR047W	YNL134C	P53912	376 aa	Known RBP	11.42	□□□□□ -0.58
HEM12	YDR047W	MZM1	Q03429	123 aa	Predicted RBP	11.42	□□□□□ -0.58
HEM12	YDR047W	SNU56	Q03782	492 aa	Known RBP	11.42	□□□□□ -0.58
HEM12	YDR047W	PCD1	Q12524	340 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	ECM29	P38737	1868 aa		11.42	□□□□□ -0.58
HEM12	YDR047W	QCR6	P00127	147 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	CHS1	P08004	1131 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	ALD5	P40047	520 aa	Known RBP	11.41	□□□□□ -0.58
HEM12	YDR047W	ATG36	P46983	293 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	CPR6	P53691	371 aa	Known RBP	11.41	□□□□□ -0.58
HEM12	YDR047W	VPS72	Q03388	795 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	CDD1	Q06549	142 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	FRA1	Q07825	749 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	ACM1	Q08981	209 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	YOR131C	Q12486	218 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	CTF3	Q12748	733 aa		11.41	□□□□□ -0.58
HEM12	YDR047W	PYC1	P11154	1178 aa	Known RBP	11.4	□□□□□ -0.58
HEM12	YDR047W	AEP2	P22136	580 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	VBA3	P25594	458 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	SEC1	P30619	724 aa	Known RBP	11.4	□□□□□ -0.58
HEM12	YDR047W	VBA5	P36172	582 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	CCL1	P37366	393 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	TBS1	P38114	1094 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	POP4	P38336	279 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	AZR1	P50080	613 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	ARO80	Q04052	950 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	PNP1	Q05788	311 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	TRE1	Q08919	783 aa		11.4	□□□□□ -0.58
HEM12	YDR047W	RAD10	P06838	210 aa		11.39	□□□□□ -0.59
HEM12	YDR047W	YML002W	P0CF17	737 aa		11.39	□□□□□ -0.59
HEM12	YDR047W	PUT4	P15380	627 aa		11.39	□□□□□ -0.59
HEM12	YDR047W	YBL036C	P38197	257 aa		11.39	□□□□□ -0.59
HEM12	YDR047W	SWC5	P38326	303 aa		11.39	□□□□□ -0.59
HEM12	YDR047W	AFG3	P39925	761 aa		11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms