RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W YLR464WP0CX17 216 aa2.47□□□□□ -2.01
CDC53YDL132W CBP3P21560 335 aa2.47□□□□□ -2.01
CDC53YDL132W ADP1P25371 1049 aa2.47□□□□□ -2.01
CDC53YDL132W PET309P32522 965 aaPredicted RBP2.47□□□□□ -2.01
CDC53YDL132W SLC1P33333 303 aa2.47□□□□□ -2.01
CDC53YDL132W SEG2P34250 1132 aa2.47□□□□□ -2.01
CDC53YDL132W SAF1P38352 637 aa2.47□□□□□ -2.01
CDC53YDL132W PEX7P39108 375 aa2.47□□□□□ -2.01
CDC53YDL132W YEL076CP39971 216 aa2.47□□□□□ -2.01
CDC53YDL132W SET2P46995 733 aaKnown RBP2.47□□□□□ -2.01
CDC53YDL132W MAD3P47074 515 aa2.47□□□□□ -2.01
CDC53YDL132W MDR1P53258 950 aa2.47□□□□□ -2.01
CDC53YDL132W SQS1P53866 767 aaKnown RBP2.47□□□□□ -2.01
CDC53YDL132W MTD1Q02046 320 aaKnown RBP2.47□□□□□ -2.01
CDC53YDL132W LEE1Q02799 301 aaKnown RBP2.47□□□□□ -2.01
CDC53YDL132W MSC2Q03455 724 aa2.47□□□□□ -2.01
CDC53YDL132W GIR2Q03768 265 aaPredicted RBP2.47□□□□□ -2.01
CDC53YDL132W ARP7Q12406 477 aa2.47□□□□□ -2.01
CDC53YDL132W CYC1P00044 109 aaPredicted RBP2.46□□□□□ -2.02
CDC53YDL132W PHO5P00635 467 aa2.46□□□□□ -2.02
CDC53YDL132W SED4P25365 1065 aa2.46□□□□□ -2.02
CDC53YDL132W RER1P25560 188 aa2.46□□□□□ -2.02
CDC53YDL132W TGL1P34163 548 aa2.46□□□□□ -2.02
CDC53YDL132W SRP68P38687 599 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W RPT2P40327 437 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W PSF2P40359 213 aa2.46□□□□□ -2.02
CDC53YDL132W FAF1P40546 346 aaPredicted RBP2.46□□□□□ -2.02
CDC53YDL132W EXG2P52911 562 aa2.46□□□□□ -2.02
CDC53YDL132W PKH1Q03407 766 aa2.46□□□□□ -2.02
CDC53YDL132W HLR1Q04429 423 aa2.46□□□□□ -2.02
CDC53YDL132W VHS3Q08438 674 aa2.46□□□□□ -2.02
CDC53YDL132W YDR056CQ12025 205 aa2.46□□□□□ -2.02
CDC53YDL132W YOL087CQ99247 1116 aa2.46□□□□□ -2.02
CDC53YDL132W GAL10P04397 699 aa2.46□□□□□ -2.02
CDC53YDL132W RPS9BP05755 195 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W PYC1P11154 1178 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W CDC26P14724 124 aa2.46□□□□□ -2.02
CDC53YDL132W HOP1P20050 605 aa2.46□□□□□ -2.02
CDC53YDL132W NGG1P32494 702 aa2.46□□□□□ -2.02
CDC53YDL132W RPT3P33298 428 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W APT2P36973 181 aa2.46□□□□□ -2.02
CDC53YDL132W MIP6P38760 659 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W SLN1P39928 1220 aaPredicted RBP2.46□□□□□ -2.02
CDC53YDL132W VHR1P40522 640 aa2.46□□□□□ -2.02
CDC53YDL132W PFA3P42836 336 aa2.46□□□□□ -2.02
CDC53YDL132W GCV2P49095 1034 aa2.46□□□□□ -2.02
CDC53YDL132W PRP31P49704 494 aaPredicted RBP2.46□□□□□ -2.02
CDC53YDL132W YGR130CP53278 816 aa2.46□□□□□ -2.02
CDC53YDL132W ESF2P53743 316 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W YPS7Q06325 596 aa2.46□□□□□ -2.02
CDC53YDL132W TSR2Q06672 205 aaKnown RBP2.46□□□□□ -2.02
CDC53YDL132W VAS1P07806 1104 aaKnown RBP2.45□□□□□ -2.02
CDC53YDL132W ADH4P10127 382 aa2.45□□□□□ -2.02
CDC53YDL132W PFK2P16862 959 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
CDC53YDL132W RAD16P31244 790 aa2.45□□□□□ -2.02
CDC53YDL132W AKL1P38080 1108 aaKnown RBP2.45□□□□□ -2.02
CDC53YDL132W TAF5P38129 798 aa2.45□□□□□ -2.02
CDC53YDL132W UME6P39001 836 aa2.45□□□□□ -2.02
CDC53YDL132W BEM4P39011 633 aa2.45□□□□□ -2.02
CDC53YDL132W SWD1P39706 426 aa2.45□□□□□ -2.02
CDC53YDL132W KAP123P40069 1113 aaKnown RBP2.45□□□□□ -2.02
CDC53YDL132W MEP3P53390 489 aa2.45□□□□□ -2.02
CDC53YDL132W MRPL13Q02204 264 aa2.45□□□□□ -2.02
CDC53YDL132W YMR187CQ03236 431 aa2.45□□□□□ -2.02
CDC53YDL132W ROT1Q03691 256 aa2.45□□□□□ -2.02
CDC53YDL132W HOS1Q12214 470 aa2.45□□□□□ -2.02
CDC53YDL132W RRI2Q12348 645 aa2.45□□□□□ -2.02
CDC53YDL132W SWM1Q12379 170 aa2.45□□□□□ -2.02
CDC53YDL132W GCD1P09032 578 aaPredicted RBP2.44□□□□□ -2.02
CDC53YDL132W MSB1P21339 1137 aaKnown RBP2.44□□□□□ -2.02
CDC53YDL132W SEC15P22224 910 aa2.44□□□□□ -2.02
CDC53YDL132W ABZ1P37254 787 aaPredicted RBP2.44□□□□□ -2.02
CDC53YDL132W ETP1P38748 585 aaKnown RBP2.44□□□□□ -2.02
CDC53YDL132W YEL068CP39977 110 aa2.44□□□□□ -2.02
CDC53YDL132W YNL195CP40168 261 aa2.44□□□□□ -2.02
CDC53YDL132W RAD26P40352 1085 aa2.44□□□□□ -2.02
CDC53YDL132W SDP1P40479 209 aa2.44□□□□□ -2.02
CDC53YDL132W MND2P40577 368 aa2.44□□□□□ -2.02
CDC53YDL132W ENP2P48234 707 aaKnown RBP2.44□□□□□ -2.02
CDC53YDL132W SAP4P53036 818 aa2.44□□□□□ -2.02
CDC53YDL132W TRS130Q03660 1102 aa2.44□□□□□ -2.02
CDC53YDL132W MCA1Q08601 432 aa2.44□□□□□ -2.02
CDC53YDL132W ERG20P08524 352 aaKnown RBP2.44□□□□□ -2.02
CDC53YDL132W PCK1P10963 549 aa2.44□□□□□ -2.02
CDC53YDL132W POL3P15436 1097 aa2.44□□□□□ -2.02
CDC53YDL132W CLB4P24871 460 aa2.44□□□□□ -2.02
CDC53YDL132W MRPL36P36531 177 aa2.44□□□□□ -2.02
CDC53YDL132W SHM2P37291 469 aaKnown RBP2.44□□□□□ -2.02
CDC53YDL132W MCX1P38323 520 aaPredicted RBP2.44□□□□□ -2.02
CDC53YDL132W SPC72P39723 622 aa2.44□□□□□ -2.02
CDC53YDL132W IMA5P40884 581 aa2.44□□□□□ -2.02
CDC53YDL132W CTH1P47976 325 aa2.44□□□□□ -2.02
CDC53YDL132W MUS81Q04149 632 aaPredicted RBP2.44□□□□□ -2.02
CDC53YDL132W SIZ1Q04195 904 aa2.44□□□□□ -2.02
CDC53YDL132W VBA4Q04602 768 aaKnown RBP2.44□□□□□ -2.02
CDC53YDL132W OPY2Q06810 360 aa2.44□□□□□ -2.02
CDC53YDL132W YDR215CQ12240 137 aa2.44□□□□□ -2.02
CDC53YDL132W MIS1P09440 975 aaKnown RBP2.43□□□□□ -2.02
CDC53YDL132W GFA1P14742 717 aaKnown RBP2.43□□□□□ -2.02
CDC53YDL132W SAN1P22470 610 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms