RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	LYS9	P38999	446 aa		5.23	□□□□□ -1.57
APA1	YCL050C	YJR142W	P47173	342 aa		5.23	□□□□□ -1.57
APA1	YCL050C	GND2	P53319	492 aa		5.23	□□□□□ -1.57
APA1	YCL050C	BRE5	P53741	515 aa	Known RBP	5.23	□□□□□ -1.57
APA1	YCL050C	LEE1	Q02799	301 aa	Known RBP	5.23	□□□□□ -1.57
APA1	YCL050C	THI73	Q07904	523 aa		5.23	□□□□□ -1.57
APA1	YCL050C	DIA2	Q08496	732 aa	Predicted RBP	5.23	□□□□□ -1.57
APA1	YCL050C	YKL033W-A	Q86ZR7	236 aa		5.23	□□□□□ -1.57
APA1	YCL050C	ERG6	P25087	383 aa	Known RBP	5.22	□□□□□ -1.57
APA1	YCL050C	PRP19	P32523	503 aa	Known RBP	5.22	□□□□□ -1.57
APA1	YCL050C	SPC42	P36094	363 aa		5.22	□□□□□ -1.57
APA1	YCL050C	SFB3	P38810	929 aa		5.22	□□□□□ -1.57
APA1	YCL050C	YHR202W	P38887	602 aa		5.22	□□□□□ -1.57
APA1	YCL050C	CKB2	P38930	258 aa		5.22	□□□□□ -1.57
APA1	YCL050C	GID8	P40208	455 aa		5.22	□□□□□ -1.57
APA1	YCL050C	SDS3	P40505	327 aa		5.22	□□□□□ -1.57
APA1	YCL050C	YJR039W	P47107	1121 aa		5.22	□□□□□ -1.57
APA1	YCL050C	PAN2	P53010	1115 aa	Predicted RBP	5.22	□□□□□ -1.57
APA1	YCL050C	ISA1	Q07821	250 aa	Predicted RBP	5.22	□□□□□ -1.57
APA1	YCL050C	DCS2	Q12123	353 aa		5.22	□□□□□ -1.57
APA1	YCL050C	NUP145	P49687	1317 aa		5.22	□□□□□ -1.57
APA1	YCL050C	CDC43	P18898	376 aa		5.21	□□□□□ -1.58
APA1	YCL050C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
APA1	YCL050C	MTH1	P35198	433 aa		5.21	□□□□□ -1.58
APA1	YCL050C	TYS1	P36421	394 aa	Known RBP	5.21	□□□□□ -1.58
APA1	YCL050C	PMT3	P47190	753 aa		5.21	□□□□□ -1.58
APA1	YCL050C	ECM3	Q99252	613 aa		5.21	□□□□□ -1.58
APA1	YCL050C	AKL1	P38080	1108 aa	Known RBP	5.2	□□□□□ -1.58
APA1	YCL050C	BRN1	P38170	754 aa		5.2	□□□□□ -1.58
APA1	YCL050C	CRP1	P38845	465 aa	Known RBP	5.2	□□□□□ -1.58
APA1	YCL050C	GET2	P40056	285 aa		5.2	□□□□□ -1.58
APA1	YCL050C	YNL195C	P40168	261 aa		5.2	□□□□□ -1.58
APA1	YCL050C	RET2	P43621	546 aa		5.2	□□□□□ -1.58
APA1	YCL050C	NOP9	P47077	666 aa	Known RBP	5.2	□□□□□ -1.58
APA1	YCL050C	YJR096W	P47137	282 aa		5.2	□□□□□ -1.58
APA1	YCL050C	HMO1	Q03973	246 aa	Known RBP	5.2	□□□□□ -1.58
APA1	YCL050C	IRC10	Q08118	586 aa		5.2	□□□□□ -1.58
APA1	YCL050C	PEX1	P24004	1043 aa		5.19	□□□□□ -1.58
APA1	YCL050C	MRH1	Q12117	320 aa	Predicted RBP	5.19	□□□□□ -1.58
APA1	YCL050C	CLF1	Q12309	687 aa	Predicted RBP	5.19	□□□□□ -1.58
APA1	YCL050C	ZRT2	Q12436	422 aa		5.19	□□□□□ -1.58
APA1	YCL050C	SIR3	P06701	978 aa		5.18	□□□□□ -1.58
APA1	YCL050C	ERG20	P08524	352 aa	Known RBP	5.18	□□□□□ -1.58
APA1	YCL050C	KIN3	P22209	435 aa		5.18	□□□□□ -1.58
APA1	YCL050C	SEC15	P22224	910 aa		5.18	□□□□□ -1.58
APA1	YCL050C	NUG1	P40010	520 aa	Known RBP	5.18	□□□□□ -1.58
APA1	YCL050C	RSC8	P43609	557 aa	Known RBP	5.18	□□□□□ -1.58
APA1	YCL050C	YGR153W	P48238	217 aa		5.18	□□□□□ -1.58
APA1	YCL050C	YNR029C	P53729	429 aa	Known RBP	5.18	□□□□□ -1.58
APA1	YCL050C	UME1	Q03010	460 aa		5.18	□□□□□ -1.58
APA1	YCL050C	YMR210W	Q03649	449 aa		5.18	□□□□□ -1.58
APA1	YCL050C	VHS3	Q08438	674 aa		5.18	□□□□□ -1.58
APA1	YCL050C	PHO11	P35842	467 aa		5.17	□□□□□ -1.58
APA1	YCL050C	PHO12	P38693	467 aa		5.17	□□□□□ -1.58
APA1	YCL050C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
APA1	YCL050C	SMX3	P54999	86 aa	Predicted RBP	5.17	□□□□□ -1.58
APA1	YCL050C	IMG2	P25642	146 aa	Predicted RBP	5.16	□□□□□ -1.58
APA1	YCL050C	PIG2	P40187	538 aa		5.16	□□□□□ -1.58
APA1	YCL050C	ARG2	P40360	574 aa		5.16	□□□□□ -1.58
APA1	YCL050C	NDC80	P40460	691 aa		5.16	□□□□□ -1.58
APA1	YCL050C	DOS2	P54858	310 aa		5.16	□□□□□ -1.58
APA1	YCL050C	MTQ2	Q03920	221 aa	Predicted RBP	5.16	□□□□□ -1.58
APA1	YCL050C	GFA1	P14742	717 aa	Known RBP	5.15	□□□□□ -1.59
APA1	YCL050C	PET127	P32606	800 aa		5.15	□□□□□ -1.59
APA1	YCL050C	BEM4	P39011	633 aa		5.15	□□□□□ -1.59
APA1	YCL050C	QRI1	P43123	477 aa	Known RBP	5.15	□□□□□ -1.59
APA1	YCL050C	CTR1	P49573	406 aa		5.15	□□□□□ -1.59
APA1	YCL050C	YGR237C	P50089	785 aa		5.15	□□□□□ -1.59
APA1	YCL050C	FHN1	P53279	174 aa		5.15	□□□□□ -1.59
APA1	YCL050C	HFD1	Q04458	532 aa		5.15	□□□□□ -1.59
APA1	YCL050C	VBA4	Q04602	768 aa	Known RBP	5.15	□□□□□ -1.59
APA1	YCL050C	YLR407W	Q06070	228 aa		5.15	□□□□□ -1.59
APA1	YCL050C	RGC1	Q06108	1083 aa	Known RBP	5.15	□□□□□ -1.59
APA1	YCL050C	THI22	Q06490	572 aa		5.15	□□□□□ -1.59
APA1	YCL050C	FAP7	Q12055	197 aa	Predicted RBP	5.15	□□□□□ -1.59
APA1	YCL050C	TAD3	Q9URQ3	322 aa		5.15	□□□□□ -1.59
APA1	YCL050C	RPS9B	P05755	195 aa	Known RBP	5.14	□□□□□ -1.59
APA1	YCL050C	FRS1	P15624	595 aa	Known RBP	5.14	□□□□□ -1.59
APA1	YCL050C	DMC1	P25453	334 aa		5.14	□□□□□ -1.59
APA1	YCL050C	BCS1	P32839	456 aa		5.14	□□□□□ -1.59
APA1	YCL050C	BIT2	P38346	545 aa		5.14	□□□□□ -1.59
APA1	YCL050C	YJL206C	P39529	758 aa		5.14	□□□□□ -1.59
APA1	YCL050C	GZF3	P42944	551 aa	Known RBP	5.14	□□□□□ -1.59
APA1	YCL050C	VPS36	Q06696	566 aa		5.14	□□□□□ -1.59
APA1	YCL050C	YTM1	Q12024	460 aa	Predicted RBP	5.14	□□□□□ -1.59
APA1	YCL050C	MLH3	Q12083	715 aa		5.14	□□□□□ -1.59
APA1	YCL050C	USV1	Q12132	391 aa		5.14	□□□□□ -1.59
APA1	YCL050C	POM34	Q12445	299 aa		5.14	□□□□□ -1.59
APA1	YCL050C	ABF1	P14164	731 aa		5.13	□□□□□ -1.59
APA1	YCL050C	HCA4	P20448	770 aa	Known RBP	5.13	□□□□□ -1.59
APA1	YCL050C	PRP28	P23394	588 aa		5.13	□□□□□ -1.59
APA1	YCL050C	KIN82	P25341	720 aa		5.13	□□□□□ -1.59
APA1	YCL050C	YKU70	P32807	602 aa		5.13	□□□□□ -1.59
APA1	YCL050C	GLG1	P36143	616 aa		5.13	□□□□□ -1.59
APA1	YCL050C	TDP1	P38319	544 aa		5.13	□□□□□ -1.59
APA1	YCL050C	ATG4	P53867	494 aa		5.13	□□□□□ -1.59
APA1	YCL050C	SEC65	P29478	273 aa		5.12	□□□□□ -1.59
APA1	YCL050C	CCT5	P40413	562 aa	Known RBP	5.12	□□□□□ -1.59
APA1	YCL050C	YIL077C	P40508	320 aa		5.12	□□□□□ -1.59
APA1	YCL050C	YHM2	Q04013	314 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 51 ms