RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SGM1P47166 707 aa6.16□□□□□ -1.42
SHM1YBR263W ENV11P53246 860 aa6.16□□□□□ -1.42
SHM1YBR263W YNL146WP53906 100 aa6.16□□□□□ -1.42
SHM1YBR263W SSL2Q00578 843 aa6.16□□□□□ -1.42
SHM1YBR263W SPP382Q06411 708 aaPredicted RBP6.16□□□□□ -1.42
SHM1YBR263W HIF1Q12373 385 aa6.16□□□□□ -1.42
SHM1YBR263W ATE1P16639 503 aa6.15□□□□□ -1.42
SHM1YBR263W POT1P27796 417 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SHM1YBR263W RKM3P38222 552 aa6.15□□□□□ -1.42
SHM1YBR263W UBP5P39944 805 aa6.15□□□□□ -1.42
SHM1YBR263W YFL040WP43562 540 aa6.15□□□□□ -1.42
SHM1YBR263W AIP1P46680 615 aaKnown RBP6.15□□□□□ -1.42
SHM1YBR263W HFI1Q12060 488 aa6.15□□□□□ -1.42
SHM1YBR263W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
SHM1YBR263W PHO8P11491 566 aa6.15□□□□□ -1.43
SHM1YBR263W WHI2P12611 486 aa6.15□□□□□ -1.43
SHM1YBR263W DPH2P32461 534 aa6.15□□□□□ -1.43
SHM1YBR263W VPS35P34110 944 aa6.15□□□□□ -1.43
SHM1YBR263W ADE17P38009 592 aaKnown RBP6.15□□□□□ -1.43
SHM1YBR263W GRS1P38088 690 aaKnown RBP6.15□□□□□ -1.43
SHM1YBR263W PSY4P38193 441 aa6.15□□□□□ -1.43
SHM1YBR263W LCB2P40970 561 aa6.15□□□□□ -1.43
SHM1YBR263W TOS3P43637 560 aa6.15□□□□□ -1.43
SHM1YBR263W VID30P53076 958 aa6.15□□□□□ -1.43
SHM1YBR263W MNP1P53163 194 aaPredicted RBP6.15□□□□□ -1.43
SHM1YBR263W BIO5P53744 561 aaKnown RBP6.15□□□□□ -1.43
SHM1YBR263W VTC3Q02725 835 aa6.15□□□□□ -1.43
SHM1YBR263W MUK1Q02866 612 aa6.15□□□□□ -1.43
SHM1YBR263W CDC53Q12018 815 aaKnown RBP6.15□□□□□ -1.43
SHM1YBR263W REC8Q12188 680 aa6.15□□□□□ -1.43
SHM1YBR263W OSW2Q12202 724 aa6.15□□□□□ -1.43
SHM1YBR263W MED1Q12321 566 aa6.15□□□□□ -1.43
SHM1YBR263W OM45P16547 393 aa6.14□□□□□ -1.43
SHM1YBR263W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
SHM1YBR263W WHI3P34761 661 aaKnown RBP6.14□□□□□ -1.43
SHM1YBR263W CCM1P48237 864 aaPredicted RBP6.14□□□□□ -1.43
SHM1YBR263W CUL3P53202 744 aa6.14□□□□□ -1.43
SHM1YBR263W RSC1P53236 928 aa6.14□□□□□ -1.43
SHM1YBR263W TPO2P53283 614 aa6.14□□□□□ -1.43
SHM1YBR263W EBS1Q03466 884 aaKnown RBP6.14□□□□□ -1.43
SHM1YBR263W ECM7Q06200 448 aa6.14□□□□□ -1.43
SHM1YBR263W CHS2P14180 963 aa6.13□□□□□ -1.43
SHM1YBR263W MRC1P25588 1096 aa6.13□□□□□ -1.43
SHM1YBR263W TFA2P36145 328 aa6.13□□□□□ -1.43
SHM1YBR263W VID24P38263 362 aa6.13□□□□□ -1.43
SHM1YBR263W HXT8P40886 569 aa6.13□□□□□ -1.43
SHM1YBR263W ORC5P50874 479 aa6.13□□□□□ -1.43
SHM1YBR263W YGR130CP53278 816 aa6.13□□□□□ -1.43
SHM1YBR263W YML083CQ04526 418 aa6.13□□□□□ -1.43
SHM1YBR263W GFD1Q04839 188 aaKnown RBP6.13□□□□□ -1.43
SHM1YBR263W HCR1Q05775 265 aaKnown RBP6.13□□□□□ -1.43
SHM1YBR263W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
SHM1YBR263W TMA16Q08687 178 aa6.13□□□□□ -1.43
SHM1YBR263W SOG2Q08817 791 aa6.13□□□□□ -1.43
SHM1YBR263W ZPS1Q12512 249 aa6.13□□□□□ -1.43
SHM1YBR263W MOT1P32333 1867 aa6.12□□□□□ -1.43
SHM1YBR263W COX4P04037 155 aa6.12□□□□□ -1.43
SHM1YBR263W CDC37P06101 506 aaKnown RBP6.12□□□□□ -1.43
SHM1YBR263W HIP1P06775 603 aa6.12□□□□□ -1.43
SHM1YBR263W ADE2P21264 571 aaKnown RBP6.12□□□□□ -1.43
SHM1YBR263W CAD1P24813 409 aaKnown RBP6.12□□□□□ -1.43
SHM1YBR263W FUB1P25659 250 aa6.12□□□□□ -1.43
SHM1YBR263W PUB1P32588 453 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SHM1YBR263W YET1P35723 206 aa6.12□□□□□ -1.43
SHM1YBR263W DRE2P36152 348 aa6.12□□□□□ -1.43
SHM1YBR263W MRX3P38172 270 aa6.12□□□□□ -1.43
SHM1YBR263W POA1P38218 177 aa6.12□□□□□ -1.43
SHM1YBR263W FOL2P51601 243 aaKnown RBP6.12□□□□□ -1.43
SHM1YBR263W WAR1Q03631 944 aa6.12□□□□□ -1.43
SHM1YBR263W TRS130Q03660 1102 aa6.12□□□□□ -1.43
SHM1YBR263W DOT1Q04089 582 aaKnown RBP6.12□□□□□ -1.43
SHM1YBR263W COG4Q06096 861 aa6.12□□□□□ -1.43
SHM1YBR263W YAP7Q08182 245 aa6.12□□□□□ -1.43
SHM1YBR263W FAL1Q12099 399 aaKnown RBP6.12□□□□□ -1.43
SHM1YBR263W TAF13P11747 167 aa6.11□□□□□ -1.43
SHM1YBR263W GLN3P18494 730 aa6.11□□□□□ -1.43
SHM1YBR263W LIP5P32875 414 aa6.11□□□□□ -1.43
SHM1YBR263W MRPL10P36520 322 aa6.11□□□□□ -1.43
SHM1YBR263W YAP1801P38856 637 aa6.11□□□□□ -1.43
SHM1YBR263W AIM46P38885 310 aa6.11□□□□□ -1.43
SHM1YBR263W RGD2P43556 714 aa6.11□□□□□ -1.43
SHM1YBR263W ASN1P49089 572 aaKnown RBP6.11□□□□□ -1.43
SHM1YBR263W GCV2P49095 1034 aa6.11□□□□□ -1.43
SHM1YBR263W SHE10P53075 577 aa6.11□□□□□ -1.43
SHM1YBR263W UTP14Q04500 899 aaKnown RBP6.11□□□□□ -1.43
SHM1YBR263W PCD1Q12524 340 aa6.11□□□□□ -1.43
SHM1YBR263W ADE4P04046 510 aaKnown RBP6.1□□□□□ -1.43
SHM1YBR263W TOM70P07213 617 aaKnown RBP6.1□□□□□ -1.43
SHM1YBR263W MUD1P32605 298 aaKnown RBP6.1□□□□□ -1.43
SHM1YBR263W SKG6P32900 734 aaPredicted RBP6.1□□□□□ -1.43
SHM1YBR263W RPC25P35718 212 aa6.1□□□□□ -1.43
SHM1YBR263W LEM3P42838 414 aa6.1□□□□□ -1.43
SHM1YBR263W HSH155P49955 971 aaKnown RBP6.1□□□□□ -1.43
SHM1YBR263W TIM8P57744 87 aa6.1□□□□□ -1.43
SHM1YBR263W LCD1Q04377 747 aa6.1□□□□□ -1.43
SHM1YBR263W DON1Q05610 365 aa6.1□□□□□ -1.43
SHM1YBR263W RLP24Q07915 199 aaKnown RBP6.1□□□□□ -1.43
SHM1YBR263W MLH2Q07980 695 aa6.1□□□□□ -1.43
SHM1YBR263W SWI6P09959 803 aa6.09□□□□□ -1.43
SHM1YBR263W RPT1P33299 467 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 111.4 ms