RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	OKP1	P53298	406 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	RSC3	Q06639	885 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	SAM3	Q08986	587 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	RTC5	Q12108	567 aa	Known RBP	4.82	□□□□□ -1.64
VHC1	YBR235W	SEY1	Q99287	776 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	YSP2	Q06681	1438 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	HSP30	P25619	332 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	DUR1,2	P32528	1835 aa	Known RBP	4.82	□□□□□ -1.64
VHC1	YBR235W	SQT1	P35184	431 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	BLI1	P35727	113 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	LAS1	P36146	502 aa	Predicted RBP	4.82	□□□□□ -1.64
VHC1	YBR235W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
VHC1	YBR235W	SHM1	P37292	490 aa	Predicted RBP	4.82	□□□□□ -1.64
VHC1	YBR235W	YRO2	P38079	344 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	BUD16	P39988	312 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	GID8	P40208	455 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	BRE2	P43132	505 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	BNA6	P43619	295 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	YPT11	P48559	417 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	RMR1	P53060	241 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	ORC3	P54790	616 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	LGE1	Q02796	332 aa	Known RBP	4.82	□□□□□ -1.64
VHC1	YBR235W	IRC3	Q06683	689 aa		4.82	□□□□□ -1.64
VHC1	YBR235W	TUF1	P02992	437 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	RPS6A	P0CX37	236 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	RPS6B	P0CX38	236 aa	Predicted RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	MTF2	P10849	440 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SPS22	P25380	463 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	MCM4	P30665	933 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	XRS2	P33301	854 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SAS3	P34218	831 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	MYO3	P36006	1272 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	ERP5	P38819	212 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	YHR219W	P38900	624 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	RCY1	P39531	840 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SSP120	P39931	234 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	NOP16	P40007	231 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	BNA3	P47039	444 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	IMD3	P50095	523 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	ATG38	Q05789	226 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	TOS4	Q06266	489 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	AFT2	Q08957	416 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SSF2	Q12153	453 aa	Predicted RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	BNR1	P40450	1375 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	KSS1	P14681	368 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	PHO13	P19881	312 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SIT4	P20604	311 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	RET1	P22276	1149 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	SLA1	P32790	1244 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	TYE7	P33122	291 aa	Predicted RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	CNS1	P33313	385 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SLX8	P40072	274 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	FKH1	P40466	484 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	DBP6	P53734	629 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	SHE9	Q04172	456 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	ADY3	Q07732	790 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	PDR11	P40550	1411 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	YAK1	P14680	807 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SEC63	P14906	663 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	SPO12	P17123	173 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	CAD1	P24813	409 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	EFT1	P32324	842 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	BAP2	P38084	609 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	YJR039W	P47107	1121 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	LYS4	P49367	693 aa	Predicted RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	MIG2	P53035	382 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	ALF1	P53904	254 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	VPS16	Q03308	798 aa		4.81	□□□□□ -1.64
VHC1	YBR235W	RGC1	Q06108	1083 aa	Known RBP	4.81	□□□□□ -1.64
VHC1	YBR235W	RPS17A	P02407	136 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	PIF1	P07271	859 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	PYC1	P11154	1178 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	RPS17B	P14127	136 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	HSP60	P19882	572 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	REB1	P21538	810 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	AST1	P35183	429 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	UBP11	P36026	717 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	INP51	P40559	946 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	ALA1	P40825	983 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	RTS2	P40962	232 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	SWP82	P43554	623 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	PRO2	P54885	456 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	MLC2	Q06580	163 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	RSC58	Q07979	502 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	YOR289W	Q12012	251 aa	Predicted RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	NTO1	Q12311	748 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	PGA3	Q12746	312 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	LAM4	P38800	1345 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	PMA2	P19657	947 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	KIN3	P22209	435 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	RSC6	P25632	483 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	RAD27	P26793	382 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	COQ8	P27697	501 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	ZIP1	P31111	875 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	SFA1	P32771	386 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	TEF4	P36008	412 aa	Known RBP	4.8	□□□□□ -1.64
VHC1	YBR235W	YKR015C	P36111	568 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	UIP5	P36137	443 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	GLG1	P36143	616 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	RRF1	P38771	230 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms