RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 ATG3Q9NT62 314 aa5.94□□□□□ -1.46
COPB1-205ENST00000526527 LRFN2Q9ULH4 789 aa5.94□□□□□ -1.46
COPB1-205ENST00000526527 LEMD3Q9Y2U8 911 aa5.94□□□□□ -1.46
COPB1-205ENST00000526527 DBX1A6NMT0 343 aa5.93□□□□□ -1.46
COPB1-205ENST00000526527 FOSL1P15407 271 aa5.93□□□□□ -1.46
COPB1-205ENST00000526527 CMTR1Q8N1G2 835 aaKnown RBP5.93□□□□□ -1.46
COPB1-205ENST00000526527 GIMAP7Q8NHV1 300 aa5.93□□□□□ -1.46
COPB1-205ENST00000526527 CCER1Q8TC90 406 aaPredicted RBP5.93□□□□□ -1.46
COPB1-205ENST00000526527 COL26A1Q96A83 441 aa5.93□□□□□ -1.46
COPB1-205ENST00000526527 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
COPB1-205ENST00000526527 HIF3AQ9Y2N7 669 aa5.93□□□□□ -1.46
COPB1-205ENST00000526527 FSCN2O14926 492 aa5.92□□□□□ -1.46
COPB1-205ENST00000526527 DDX3YO15523 660 aaKnown RBP5.92□□□□□ -1.46
COPB1-205ENST00000526527 CDC27P30260 824 aa5.92□□□□□ -1.46
COPB1-205ENST00000526527 SPOCD1Q6ZMY3 1216 aa5.92□□□□□ -1.46
COPB1-205ENST00000526527 CARD10Q9BWT7 1032 aa5.92□□□□□ -1.46
COPB1-205ENST00000526527 LACRTQ9GZZ8 138 aa5.92□□□□□ -1.46
COPB1-205ENST00000526527 A6NJR5 290 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 F13BP05160 661 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 CDC25BP30305 580 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 PREPP48147 710 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 ZNF648Q5T619 568 aaPredicted RBP5.91□□□□□ -1.46
COPB1-205ENST00000526527 ANKRD34AQ69YU3 496 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 C14orf37Q86TY3 774 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 VSIG10LQ86VR7 867 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 TREML1Q86YW5 311 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 RGL4Q8IZJ4 473 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 UBASH3BQ8TF42 649 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 FOXD4L4Q8WXT5 416 aaPredicted RBP5.91□□□□□ -1.46
COPB1-205ENST00000526527 KCNMB2Q9Y691 235 aa5.91□□□□□ -1.46
COPB1-205ENST00000526527 ADAM11O75078 769 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 ZNF124Q15973 351 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 CDCA8Q53HL2 280 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 COX20Q5RI15 118 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 CFAP70Q5T0N1 1121 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 CEP135Q66GS9 1140 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 FAM200AQ8TCP9 573 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 KLHDC7BQ96G42 594 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 OSBPL1AQ9BXW6 950 aa5.9□□□□□ -1.46
COPB1-205ENST00000526527 MAP4P27816 1152 aaKnown RBP5.89□□□□□ -1.47
COPB1-205ENST00000526527 FKBP5Q13451 457 aaPredicted RBP5.89□□□□□ -1.47
COPB1-205ENST00000526527 CPSF6Q16630 551 aaKnown RBP eCLIP5.89□□□□□ -1.47
COPB1-205ENST00000526527 FAM117BQ6P1L5 589 aa5.89□□□□□ -1.47
COPB1-205ENST00000526527 FBXL6Q8N531 539 aa5.89□□□□□ -1.47
COPB1-205ENST00000526527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.89□□□□□ -1.47
COPB1-205ENST00000526527 SMNDC1O75940 238 aaKnown RBP eCLIP5.88□□□□□ -1.47
COPB1-205ENST00000526527 ATP11AP98196 1134 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 COL13A1Q5TAT6 717 aaPredicted RBP5.88□□□□□ -1.47
COPB1-205ENST00000526527 ADAMTSL4Q6UY14 1074 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 NLRP13Q86W25 1043 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 PRIMPOLQ96LW4 560 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 RNF208Q9H0X6 261 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 SEC31BQ9NQW1 1179 aa5.88□□□□□ -1.47
COPB1-205ENST00000526527 BSDC1Q9NW68 430 aaPredicted RBP5.88□□□□□ -1.47
COPB1-205ENST00000526527 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
COPB1-205ENST00000526527 ETFBKMTQ8IXQ9 262 aa5.87□□□□□ -1.47
COPB1-205ENST00000526527 AGBL5Q8NDL9 886 aa5.87□□□□□ -1.47
COPB1-205ENST00000526527 OR13H1Q8NG92 308 aa5.87□□□□□ -1.47
COPB1-205ENST00000526527 SPACA7Q96KW9 195 aa5.87□□□□□ -1.47
COPB1-205ENST00000526527 SAP130Q9H0E3 1048 aa5.87□□□□□ -1.47
COPB1-205ENST00000526527 PAPLNO95428 1278 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 EPHA1P21709 976 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 RFX1P22670 979 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 HYAL2Q12891 473 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 TRIP4Q15650 581 aaPredicted RBP5.86□□□□□ -1.47
COPB1-205ENST00000526527 SGO2Q562F6 1265 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 FAM26DQ5JW98 314 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 SHISA5Q8N114 240 aa5.86□□□□□ -1.47
COPB1-205ENST00000526527 PAK6Q9NQU5 681 aaPredicted RBP5.86□□□□□ -1.47
COPB1-205ENST00000526527 SH2B1Q9NRF2 756 aaPredicted RBP5.86□□□□□ -1.47
COPB1-205ENST00000526527 NOVA2Q9UNW9 492 aaKnown RBP5.86□□□□□ -1.47
COPB1-205ENST00000526527 MEGF11A6BM72 1044 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 CYP26A1O43174 497 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 GAS2O43903 313 aaKnown RBP5.85□□□□□ -1.47
COPB1-205ENST00000526527 PRMT3O60678 531 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 FDX2Q6P4F2 183 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 FLCNQ8NFG4 579 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 WNT8BQ93098 351 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 METTL22Q9BUU2 404 aaPredicted RBP5.85□□□□□ -1.47
COPB1-205ENST00000526527 RUSC1Q9BVN2 902 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 ADAM19Q9H013 955 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 RASSF4Q9H2L5 321 aa5.85□□□□□ -1.47
COPB1-205ENST00000526527 ZNF777Q9ULD5 760 aaPredicted RBP5.85□□□□□ -1.47
COPB1-205ENST00000526527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.85□□□□□ -1.47
COPB1-205ENST00000526527 CARMIL2Q6F5E8 1435 aa5.84□□□□□ -1.47
COPB1-205ENST00000526527 FARP2O94887 1054 aaPredicted RBP5.84□□□□□ -1.47
COPB1-205ENST00000526527 RXRBP28702 533 aa5.84□□□□□ -1.47
COPB1-205ENST00000526527 OCLNQ16625 522 aa5.84□□□□□ -1.47
COPB1-205ENST00000526527 PBX4Q9BYU1 374 aa5.84□□□□□ -1.47
COPB1-205ENST00000526527 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
COPB1-205ENST00000526527 ACIN1Q9UKV3 1341 aaKnown RBP5.83□□□□□ -1.48
COPB1-205ENST00000526527 BRD2P25440 801 aaKnown RBP5.83□□□□□ -1.48
COPB1-205ENST00000526527 PIP4K2BP78356 416 aa5.83□□□□□ -1.48
COPB1-205ENST00000526527 NFKBIBQ15653 356 aa5.83□□□□□ -1.48
COPB1-205ENST00000526527 SWI5Q1ZZU3 235 aa5.83□□□□□ -1.48
COPB1-205ENST00000526527 C16orf46Q6P387 395 aa5.83□□□□□ -1.48
COPB1-205ENST00000526527 CAPN12Q6ZSI9 719 aa5.83□□□□□ -1.48
COPB1-205ENST00000526527 ZMIZ1Q9ULJ6 1067 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms