RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 ABI1Q8IZP0 508 aa6.89□□□□□ -1.31
PHC3-216ENST00000497171 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
PHC3-216ENST00000497171 KCNK4Q9NYG8 393 aa6.89□□□□□ -1.31
PHC3-216ENST00000497171 ATP11AP98196 1134 aa6.88□□□□□ -1.31
PHC3-216ENST00000497171 CPSF6Q16630 551 aaKnown RBP eCLIP6.88□□□□□ -1.31
PHC3-216ENST00000497171 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
PHC3-216ENST00000497171 UBASH3BQ8TF42 649 aa6.88□□□□□ -1.31
PHC3-216ENST00000497171 FBXL18Q96ME1 805 aa6.88□□□□□ -1.31
PHC3-216ENST00000497171 LRFN2Q9ULH4 789 aa6.88□□□□□ -1.31
PHC3-216ENST00000497171 BRD2P25440 801 aaKnown RBP6.87□□□□□ -1.31
PHC3-216ENST00000497171 WNT8BQ93098 351 aa6.87□□□□□ -1.31
PHC3-216ENST00000497171 RUSC1Q9BVN2 902 aa6.87□□□□□ -1.31
PHC3-216ENST00000497171 OSBPL1AQ9BXW6 950 aa6.87□□□□□ -1.31
PHC3-216ENST00000497171 RXRBP28702 533 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 KANK4Q5T7N3 995 aaPredicted RBP6.86□□□□□ -1.31
PHC3-216ENST00000497171 VSIG10LQ86VR7 867 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 TP53INP2Q8IXH6 220 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 FAM200AQ8TCP9 573 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
PHC3-216ENST00000497171 MFSD14AQ96MC6 490 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
PHC3-216ENST00000497171 A6NJR5 290 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 H3BRJ5 948 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 DDX3YO15523 660 aaKnown RBP6.85□□□□□ -1.31
PHC3-216ENST00000497171 PREPP48147 710 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 ARL4DP49703 201 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 COX20Q5RI15 118 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 NCAPG2Q86XI2 1143 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 METTL22Q9BUU2 404 aaPredicted RBP6.85□□□□□ -1.31
PHC3-216ENST00000497171 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 OSGEPQ9NPF4 335 aa6.85□□□□□ -1.31
PHC3-216ENST00000497171 C8AP07357 584 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 FOSL1P15407 271 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 JUNBP17275 347 aaPredicted RBP6.84□□□□□ -1.31
PHC3-216ENST00000497171 EPHA1P21709 976 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
PHC3-216ENST00000497171 TRIP4Q15650 581 aaPredicted RBP6.84□□□□□ -1.31
PHC3-216ENST00000497171 C16orf46Q6P387 395 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 FBXL6Q8N531 539 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 KLHDC7BQ96G42 594 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 CALR3Q96L12 384 aaKnown RBP6.84□□□□□ -1.31
PHC3-216ENST00000497171 PBX4Q9BYU1 374 aa6.84□□□□□ -1.31
PHC3-216ENST00000497171 ADAM11O75078 769 aa6.83□□□□□ -1.32
PHC3-216ENST00000497171 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
PHC3-216ENST00000497171 HOXA10P31260 410 aaPredicted RBP6.83□□□□□ -1.32
PHC3-216ENST00000497171 ETFBKMTQ8IXQ9 262 aa6.83□□□□□ -1.32
PHC3-216ENST00000497171 AGBL5Q8NDL9 886 aa6.83□□□□□ -1.32
PHC3-216ENST00000497171 ABI2Q9NYB9 513 aaPredicted RBP6.83□□□□□ -1.32
PHC3-216ENST00000497171 KIF4AO95239 1232 aa6.82□□□□□ -1.32
PHC3-216ENST00000497171 NLRP12P59046 1061 aa6.82□□□□□ -1.32
PHC3-216ENST00000497171 COL13A1Q5TAT6 717 aaPredicted RBP6.82□□□□□ -1.32
PHC3-216ENST00000497171 PAOXQ6QHF9 649 aa6.82□□□□□ -1.32
PHC3-216ENST00000497171 ARXQ96QS3 562 aa6.82□□□□□ -1.32
PHC3-216ENST00000497171 SH2B1Q9NRF2 756 aaPredicted RBP6.82□□□□□ -1.32
PHC3-216ENST00000497171 CCDC39Q9UFE4 941 aa6.82□□□□□ -1.32
PHC3-216ENST00000497171 FKBP5Q13451 457 aaPredicted RBP6.81□□□□□ -1.32
PHC3-216ENST00000497171 TMEM132AQ24JP5 1023 aa6.81□□□□□ -1.32
PHC3-216ENST00000497171 NUTM2GQ5VZR2 741 aa6.81□□□□□ -1.32
PHC3-216ENST00000497171 PROSER2Q86WR7 435 aaPredicted RBP6.81□□□□□ -1.32
PHC3-216ENST00000497171 SLC7A3Q8WY07 619 aa6.81□□□□□ -1.32
PHC3-216ENST00000497171 ADAM19Q9H013 955 aa6.81□□□□□ -1.32
PHC3-216ENST00000497171 PRNPP04156 253 aa6.8□□□□□ -1.32
PHC3-216ENST00000497171 MSMPQ1L6U9 139 aa6.8□□□□□ -1.32
PHC3-216ENST00000497171 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
PHC3-216ENST00000497171 YIPF2Q9BWQ6 316 aa6.8□□□□□ -1.32
PHC3-216ENST00000497171 CYP4F12Q9HCS2 524 aa6.8□□□□□ -1.32
PHC3-216ENST00000497171 BSDC1Q9NW68 430 aaPredicted RBP6.8□□□□□ -1.32
PHC3-216ENST00000497171 FAM95CA0A1B0GW59 222 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 TM4SF5O14894 197 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 CYP26A1O43174 497 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 ZAP70P43403 619 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 USP11P51784 963 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 CBLL1Q75N03 491 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 FLCNQ8NFG4 579 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
PHC3-216ENST00000497171 MEGF11A6BM72 1044 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 F13BP05160 661 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 RFX1P22670 979 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 C19orf57Q0VDD7 668 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 NFKBIBQ15653 356 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 SWI5Q1ZZU3 235 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 SGO2Q562F6 1265 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 CEP120Q8N960 986 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 POP1Q99575 1024 aaKnown RBP6.78□□□□□ -1.32
PHC3-216ENST00000497171 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
PHC3-216ENST00000497171 ITGB5P18084 799 aa6.77□□□□□ -1.33
PHC3-216ENST00000497171 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
PHC3-216ENST00000497171 GPR152Q8TDT2 470 aa6.77□□□□□ -1.33
PHC3-216ENST00000497171 GTF3C3Q9Y5Q9 886 aa6.77□□□□□ -1.33
PHC3-216ENST00000497171 BIN1O00499 593 aa6.76□□□□□ -1.33
PHC3-216ENST00000497171 PRMT3O60678 531 aa6.76□□□□□ -1.33
PHC3-216ENST00000497171 PKN1Q16512 942 aa6.76□□□□□ -1.33
PHC3-216ENST00000497171 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
PHC3-216ENST00000497171 COL26A1Q96A83 441 aa6.76□□□□□ -1.33
PHC3-216ENST00000497171 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
PHC3-216ENST00000497171 USP26Q9BXU7 913 aa6.76□□□□□ -1.33
PHC3-216ENST00000497171 RPLP1P05386 114 aaKnown RBP6.75□□□□□ -1.33
PHC3-216ENST00000497171 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms