RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Nol10Q5RJG1 687 aaKnown RBP18.91■□□□□ 0.62
Trim28-201ENSMUST00000005705 Tsen34Q8BMZ5 316 aa18.91■□□□□ 0.62
Trim28-201ENSMUST00000005705 Alpk3Q924C5 1678 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Nlrp9bQ66X22 1003 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 CtifQ6PEE2 600 aaKnown RBP18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Ube2oQ6ZPJ3 1288 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Slfnl1Q8BHW9 410 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 4930572O03RikQ8C5Y0 211 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Gnat3Q3V3I2 354 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Pde3bQ61409 1100 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Lrrc8aQ80WG5 810 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 DymQ8CHY3 669 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Stard3nlQ9DCI3 235 aa18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Mybbp1aQ7TPV4 1344 aaKnown RBP18.9■□□□□ 0.62
Trim28-201ENSMUST00000005705 Nbr1P97432 988 aa18.89■□□□□ 0.62
Trim28-201ENSMUST00000005705 Acnat2Q8BGG9 420 aa18.89■□□□□ 0.62
Trim28-201ENSMUST00000005705 U2af1l4Q8BGJ9 220 aa18.89■□□□□ 0.62
Trim28-201ENSMUST00000005705 AidaQ8C4Q6 305 aa18.89■□□□□ 0.62
Trim28-201ENSMUST00000005705 Golph3lQ8R088 285 aaKnown RBP18.89■□□□□ 0.62
Trim28-201ENSMUST00000005705 Popdc2Q9ES82 367 aa18.89■□□□□ 0.62
Trim28-201ENSMUST00000005705 Limch1Q3UH68 1057 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Kcnk13Q8R1P5 405 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ddx27Q921N6 760 aaKnown RBP18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Csrnp1P59054 583 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Nek11Q8C0Q4 628 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Frat2Q8K025 231 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Alg3Q8K2A8 438 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Otud6bQ8K2H2 294 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 SdsQ8VBT2 327 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Stk38Q91VJ4 465 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Clic4Q9QYB1 253 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ccne2Q9Z238 404 aa18.89■□□□□ 0.61
Trim28-201ENSMUST00000005705 Aox1O54754 1333 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Hspd1P63038 573 aaKnown RBP18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ddx54Q8K4L0 874 aaKnown RBP18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Osbpl5Q9ER64 874 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Elf2Q9JHC9 593 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Tbc1d4Q8BYJ6 1307 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 1700006A11RikB9EHI3 544 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Cdk4P30285 303 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Samsn1P57725 372 aa18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ppp1r10Q80W00 888 aaKnown RBP18.88■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gm21985Q6P6P5 1106 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gpatch3Q8BIY1 525 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ubxn4Q8VCH8 506 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Eif3bQ8JZQ9 803 aaKnown RBP18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Cap2Q9CYT6 476 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 PhaxQ9JJT9 385 aaKnown RBP18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Pram1Q6BCL1 675 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ano10Q8BH79 659 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Dusp10Q9ESS0 483 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Atp8b3Q6UQ17 1335 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 InsrrQ9WTL4 1300 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 SrcapA0A087WQ44 3271 aa18.87■□□□□ 0.61
Trim28-201ENSMUST00000005705 Dnaaf2Q8BPI1 814 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ltb4r2Q9JJL9 360 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Aox4Q3TYQ9 1336 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Kiaa0232Q80U59 1396 aaKnown RBP18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 A0A0U1RNP2 1173 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Pramel3A2AHA7 463 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gm7903A2AWL1 463 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 AV320801A2AWL3 467 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Vmn2r23E9PXI5 849 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gm15023L7MUB4 467 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Smg7Q5RJH6 1138 aaKnown RBP18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Terf2ipQ91VL8 393 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Wdr64Q9D565 1086 aa18.86■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gm29094F6Q785 221 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Zkscan4Q5SZT6 480 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Amigo3Q8C2S7 508 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 MthfsQ9D110 203 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Siglec1Q62230 1695 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Hoxa7P02830 229 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gtf2f1Q3THK3 508 aaKnown RBP18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Ccnl1Q52KE7 532 aaKnown RBP18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Znf568E9PYI1 671 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Serpinb6bO08804 377 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 RbsnQ80Y56 783 aa18.85■□□□□ 0.61
Trim28-201ENSMUST00000005705 Stx1aO35526 288 aa18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Gtpbp6Q3U6U5 514 aa18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Rbm19Q8R3C6 952 aaKnown RBP18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Mrpl44Q9CY73 333 aaKnown RBP18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 TnksQ6PFX9 1320 aa18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Drc7Q6V3W6 876 aa18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Rufy2Q8R4C2 606 aa18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Cwc25Q9DBF7 416 aa18.84■□□□□ 0.61
Trim28-201ENSMUST00000005705 Flad1Q8R123 492 aa18.83■□□□□ 0.61
Trim28-201ENSMUST00000005705 Emilin1Q99K41 1017 aa18.83■□□□□ 0.61
Trim28-201ENSMUST00000005705 Cplx1P63040 134 aa18.83■□□□□ 0.61
Trim28-201ENSMUST00000005705 Znf653Q6YND2 615 aa18.83■□□□□ 0.6
Trim28-201ENSMUST00000005705 Tmem87bQ8BKU8 555 aa18.83■□□□□ 0.6
Trim28-201ENSMUST00000005705 Rhot2Q8JZN7 620 aa18.83■□□□□ 0.6
Trim28-201ENSMUST00000005705 Rapgef3Q8VCC8 918 aa18.83■□□□□ 0.6
Trim28-201ENSMUST00000005705 Erc1Q99MI1 1120 aa18.83■□□□□ 0.6
Trim28-201ENSMUST00000005705 Prl3d3A0A0M6L0J6 224 aa18.82■□□□□ 0.6
Trim28-201ENSMUST00000005705 Ccdc112A0AUP1 442 aa18.82■□□□□ 0.6
Trim28-201ENSMUST00000005705 Ankle2Q6P1H6 964 aa18.82■□□□□ 0.6
Trim28-201ENSMUST00000005705 ApobrQ8VBT6 942 aa18.82■□□□□ 0.6
Trim28-201ENSMUST00000005705 BcorQ8CGN4 1759 aa18.82■□□□□ 0.6
Trim28-201ENSMUST00000005705 Tnni2P13412 182 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms