Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm25239-201ENSMUST00000174915 86 ntBASIC44.42■■■■■ 4.7
Nek11Q8C0Q4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Nek11Q8C0Q4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.82■■■■■ 4.13
Nek11Q8C0Q4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
Nek11Q8C0Q4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Nek11Q8C0Q4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.54■■■■□ 3.92
Nek11Q8C0Q4 Gm15042-201ENSMUST00000120212 883 ntBASIC39.33■■■■□ 3.89
Nek11Q8C0Q4 Gm15045-201ENSMUST00000117359 883 ntBASIC38.58■■■■□ 3.77
Nek11Q8C0Q4 Gm24109-201ENSMUST00000175489 103 ntBASIC38.29■■■■□ 3.72
Nek11Q8C0Q4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Nek11Q8C0Q4 Psd-208ENSMUST00000224556 2034 ntBASIC37.93■■■■□ 3.66
Nek11Q8C0Q4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Nek11Q8C0Q4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.56■■■■□ 3.6
Nek11Q8C0Q4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Nek11Q8C0Q4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.43■■■■□ 3.58
Nek11Q8C0Q4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Nek11Q8C0Q4 Gm23366-201ENSMUST00000175022 89 ntBASIC37.15■■■■□ 3.54
Nek11Q8C0Q4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Nek11Q8C0Q4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Nek11Q8C0Q4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Nek11Q8C0Q4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Nek11Q8C0Q4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.81■■■■□ 3.48
Nek11Q8C0Q4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
Nek11Q8C0Q4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.69■■■■□ 3.46
Nek11Q8C0Q4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Nek11Q8C0Q4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Nek11Q8C0Q4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.63■■■■□ 3.45
Nek11Q8C0Q4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Nek11Q8C0Q4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Nek11Q8C0Q4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Nek11Q8C0Q4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.2■■■■□ 3.39
Nek11Q8C0Q4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.15■■■■□ 3.38
Nek11Q8C0Q4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.09■■■■□ 3.37
Nek11Q8C0Q4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.35
Nek11Q8C0Q4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Nek11Q8C0Q4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Nek11Q8C0Q4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Nek11Q8C0Q4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Nek11Q8C0Q4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
Nek11Q8C0Q4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.51■■■■□ 3.27
Nek11Q8C0Q4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Nek11Q8C0Q4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.37■■■■□ 3.25
Nek11Q8C0Q4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.16■■■■□ 3.22
Nek11Q8C0Q4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.22
Nek11Q8C0Q4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Nek11Q8C0Q4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Nek11Q8C0Q4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Nek11Q8C0Q4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Nek11Q8C0Q4 Gm10524-201ENSMUST00000181931 1893 ntBASIC35■■■■□ 3.19
Nek11Q8C0Q4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.98■■■■□ 3.19
Nek11Q8C0Q4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Nek11Q8C0Q4 Gm25238-201ENSMUST00000174914 89 ntBASIC34.91■■■■□ 3.18
Nek11Q8C0Q4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Nek11Q8C0Q4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.79■■■■□ 3.16
Nek11Q8C0Q4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Nek11Q8C0Q4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Nek11Q8C0Q4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Nek11Q8C0Q4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Nek11Q8C0Q4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Nek11Q8C0Q4 Gm27325-201ENSMUST00000175467 74 ntBASIC34.58■■■■□ 3.13
Nek11Q8C0Q4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Nek11Q8C0Q4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.47■■■■□ 3.11
Nek11Q8C0Q4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.42■■■■□ 3.1
Nek11Q8C0Q4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.4■■■■□ 3.1
Nek11Q8C0Q4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
Nek11Q8C0Q4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Nek11Q8C0Q4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Nek11Q8C0Q4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
Nek11Q8C0Q4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.37■■■■□ 3.09
Nek11Q8C0Q4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Nek11Q8C0Q4 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.27■■■■□ 3.08
Nek11Q8C0Q4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.26■■■■□ 3.08
Nek11Q8C0Q4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Nek11Q8C0Q4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Nek11Q8C0Q4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Nek11Q8C0Q4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Nek11Q8C0Q4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.93■■■■□ 3.02
Nek11Q8C0Q4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.91■■■■□ 3.02
Nek11Q8C0Q4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Nek11Q8C0Q4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
Nek11Q8C0Q4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.79■■■■□ 3
Nek11Q8C0Q4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Nek11Q8C0Q4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Nek11Q8C0Q4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.72■■■□□ 2.99
Nek11Q8C0Q4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Nek11Q8C0Q4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Nek11Q8C0Q4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.63■■■□□ 2.97
Nek11Q8C0Q4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Nek11Q8C0Q4 Rab21-202ENSMUST00000218831 843 ntBASIC33.59■■■□□ 2.97
Nek11Q8C0Q4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Nek11Q8C0Q4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Nek11Q8C0Q4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.51■■■□□ 2.95
Nek11Q8C0Q4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Nek11Q8C0Q4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Nek11Q8C0Q4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Nek11Q8C0Q4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.43■■■□□ 2.94
Nek11Q8C0Q4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.41■■■□□ 2.94
Nek11Q8C0Q4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.93
Nek11Q8C0Q4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.36■■■□□ 2.93
Nek11Q8C0Q4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms