RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	RPS9A	O13516	197 aa	Known RBP	4.96	□□□□□ -1.62
FDH2	YPL275W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
FDH2	YPL275W	TUB3	P09734	445 aa	Known RBP	4.96	□□□□□ -1.62
FDH2	YPL275W	MEF1	P25039	761 aa		4.96	□□□□□ -1.62
FDH2	YPL275W	KAR4	P25583	335 aa		4.96	□□□□□ -1.62
FDH2	YPL275W	CYS3	P31373	394 aa	Known RBP	4.96	□□□□□ -1.62
FDH2	YPL275W	SEC21	P32074	935 aa	Known RBP	4.96	□□□□□ -1.62
FDH2	YPL275W	YKL222C	P35995	705 aa		4.96	□□□□□ -1.62
FDH2	YPL275W	ALG12	P53730	551 aa		4.96	□□□□□ -1.62
FDH2	YPL275W	DUS1	P53759	423 aa	Known RBP	4.96	□□□□□ -1.62
FDH2	YPL275W	THI21	Q08975	551 aa		4.96	□□□□□ -1.62
FDH2	YPL275W	HAL9	Q12180	1030 aa		4.96	□□□□□ -1.62
FDH2	YPL275W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.96	□□□□□ -1.62
FDH2	YPL275W	IML1	P47170	1584 aa		4.95	□□□□□ -1.62
FDH2	YPL275W	MTC2	P34246	357 aa		4.95	□□□□□ -1.62
FDH2	YPL275W	BUL1	P48524	976 aa		4.95	□□□□□ -1.62
FDH2	YPL275W	YBR182C-A	Q8TGU6	64 aa		4.95	□□□□□ -1.62
FDH2	YPL275W	NUP188	P52593	1655 aa	Known RBP	4.94	□□□□□ -1.62
FDH2	YPL275W	PRP4	P20053	465 aa	Known RBP	4.94	□□□□□ -1.62
FDH2	YPL275W	THI4	P32318	326 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	YHR078W	P38799	552 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	PUS2	P53167	370 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	RNH70	P53331	553 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	ERG5	P54781	538 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	UGO1	Q03327	502 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	YDR514C	Q04408	483 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	RSC3	Q06639	885 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	YOR022C	Q12204	715 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	NTO1	Q12311	748 aa		4.94	□□□□□ -1.62
FDH2	YPL275W	CDC9	P04819	755 aa		4.93	□□□□□ -1.62
FDH2	YPL275W	HCM1	P25364	564 aa		4.93	□□□□□ -1.62
FDH2	YPL275W	NMD2	P38798	1089 aa	Known RBP	4.93	□□□□□ -1.62
FDH2	YPL275W	POB3	Q04636	552 aa	Known RBP	4.93	□□□□□ -1.62
FDH2	YPL275W	YDR338C	Q05497	695 aa		4.93	□□□□□ -1.62
FDH2	YPL275W	NTG2	Q08214	380 aa		4.93	□□□□□ -1.62
FDH2	YPL275W	GPR1	Q12361	961 aa		4.93	□□□□□ -1.62
FDH2	YPL275W	HAP1	P0CE41	1502 aa		4.92	□□□□□ -1.62
FDH2	YPL275W	GEA1	P47102	1408 aa	Predicted RBP	4.92	□□□□□ -1.62
FDH2	YPL275W	PER1	P25625	357 aa		4.92	□□□□□ -1.62
FDH2	YPL275W	MCD4	P36051	919 aa		4.92	□□□□□ -1.62
FDH2	YPL275W	SET5	P38890	526 aa	Known RBP	4.92	□□□□□ -1.62
FDH2	YPL275W	RLP7	P40693	322 aa	Known RBP	4.92	□□□□□ -1.62
FDH2	YPL275W	PHO23	P50947	330 aa		4.92	□□□□□ -1.62
FDH2	YPL275W	ASI2	P53895	289 aa		4.92	□□□□□ -1.62
FDH2	YPL275W	PRC1	P00729	532 aa		4.91	□□□□□ -1.62
FDH2	YPL275W	PEX6	P33760	1030 aa		4.91	□□□□□ -1.62
FDH2	YPL275W	DEF1	P35732	738 aa	Known RBP	4.91	□□□□□ -1.62
FDH2	YPL275W	MSS4	P38994	779 aa		4.91	□□□□□ -1.62
FDH2	YPL275W	CAF16	P43569	289 aa		4.91	□□□□□ -1.62
FDH2	YPL275W	MET6	P05694	767 aa	Known RBP	4.9	□□□□□ -1.63
FDH2	YPL275W	PFK1	P16861	987 aa	Known RBP	4.9	□□□□□ -1.63
FDH2	YPL275W	GSY1	P23337	708 aa		4.9	□□□□□ -1.63
FDH2	YPL275W	MIH1	P23748	554 aa		4.9	□□□□□ -1.63
FDH2	YPL275W	VBA3	P25594	458 aa		4.9	□□□□□ -1.63
FDH2	YPL275W	PMI40	P29952	429 aa	Known RBP	4.9	□□□□□ -1.63
FDH2	YPL275W	STO1	P34160	861 aa	Known RBP	4.9	□□□□□ -1.63
FDH2	YPL275W	DIF1	O13577	133 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	SRD1	P09007	221 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	TRM2	P33753	639 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	CTF13	P35203	478 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	DSS1	P39112	969 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	ALY2	P47029	1046 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	ZIP2	P53061	704 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	MUS81	Q04149	632 aa	Predicted RBP	4.89	□□□□□ -1.63
FDH2	YPL275W	PEX19	Q07418	342 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	YLR001C	Q07895	862 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	TRM11	Q12463	433 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	VMR1	P38735	1592 aa		4.89	□□□□□ -1.63
FDH2	YPL275W	TRP4	P07285	380 aa	Predicted RBP	4.88	□□□□□ -1.63
FDH2	YPL275W	SAP190	P36123	1033 aa		4.88	□□□□□ -1.63
FDH2	YPL275W	SIC1	P38634	284 aa		4.88	□□□□□ -1.63
FDH2	YPL275W	PFA3	P42836	336 aa		4.88	□□□□□ -1.63
FDH2	YPL275W	SSY5	P47002	699 aa		4.88	□□□□□ -1.63
FDH2	YPL275W	ZDS1	P50111	915 aa	Known RBP	4.88	□□□□□ -1.63
FDH2	YPL275W	SNP1	Q00916	300 aa	Predicted RBP	4.88	□□□□□ -1.63
FDH2	YPL275W	SWM1	Q12379	170 aa		4.88	□□□□□ -1.63
FDH2	YPL275W	HRR25	P29295	494 aa	Known RBP	4.87	□□□□□ -1.63
FDH2	YPL275W	PPG1	P32838	368 aa		4.87	□□□□□ -1.63
FDH2	YPL275W	VHR1	P40522	640 aa		4.87	□□□□□ -1.63
FDH2	YPL275W	MRPS35	P53292	345 aa		4.87	□□□□□ -1.63
FDH2	YPL275W	GSF2	Q04697	403 aa	Known RBP	4.87	□□□□□ -1.63
FDH2	YPL275W	CAD1	P24813	409 aa	Known RBP	4.86	□□□□□ -1.63
FDH2	YPL275W	EFT1	P32324	842 aa	Known RBP	4.86	□□□□□ -1.63
FDH2	YPL275W	YEL1	P34225	687 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	CHS7	P38843	316 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	SAK1	P38990	1142 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	SHR5	P41912	237 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	KIN4	Q01919	800 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	ASM4	Q05166	528 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	PUS9	Q12069	462 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	TRM13	Q12383	476 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	YLR149C	Q99296	730 aa		4.86	□□□□□ -1.63
FDH2	YPL275W	YLR415C	O13578	112 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	TUB2	P02557	457 aa	Known RBP	4.85	□□□□□ -1.63
FDH2	YPL275W	PCL2	P25693	308 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	HOG1	P32485	435 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	TYS1	P36421	394 aa	Known RBP	4.85	□□□□□ -1.63
FDH2	YPL275W	MNN1	P39106	762 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	PZF1	P39933	429 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	AIM21	P40563	679 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms