RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	CLF1	Q12309	687 aa	Predicted RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	XRN1	P22147	1528 aa	Known RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	CYB2	P00175	591 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
GCD1	YOR260W	RNA1	P11745	407 aa	Known RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	EFT1	P32324	842 aa	Known RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	YIL108W	P40483	696 aa	Known RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	BFA1	P47113	574 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	YGR283C	P53336	341 aa	Predicted RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	HEL2	Q05580	639 aa	Known RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	HSP42	Q12329	375 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	RRI2	Q12348	645 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	YCL002C	P25565	263 aa		4.57	□□□□□ -1.68
GCD1	YOR260W	ALG2	P43636	503 aa		4.57	□□□□□ -1.68
GCD1	YOR260W	PHM6	Q05637	104 aa		4.57	□□□□□ -1.68
GCD1	YOR260W	PLP2	Q12017	286 aa		4.57	□□□□□ -1.68
GCD1	YOR260W	CFT2	Q12102	859 aa	Predicted RBP	4.57	□□□□□ -1.68
GCD1	YOR260W	MON2	P48563	1636 aa	Predicted RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	HSP82	P02829	709 aa	Known RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	MET6	P05694	767 aa	Known RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	TRP4	P07285	380 aa	Predicted RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	PHO8	P11491	566 aa		4.56	□□□□□ -1.68
GCD1	YOR260W	HSC82	P15108	705 aa	Known RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	RAD51	P25454	400 aa		4.56	□□□□□ -1.68
GCD1	YOR260W	MRC1	P25588	1096 aa		4.56	□□□□□ -1.68
GCD1	YOR260W	SEC21	P32074	935 aa	Known RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	CTF8	P38877	133 aa		4.56	□□□□□ -1.68
GCD1	YOR260W	SEC9	P40357	651 aa		4.56	□□□□□ -1.68
GCD1	YOR260W	SEC27	P41811	889 aa	Known RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	HSV2	P50079	448 aa	Predicted RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	PRP3	Q03338	469 aa	Predicted RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	RRP9	Q06506	573 aa	Known RBP	4.56	□□□□□ -1.68
GCD1	YOR260W	DAL7	P21826	554 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	BRF1	P29056	596 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	EMC3	P36039	253 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	RCF1	Q03713	159 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	LRS4	Q04087	347 aa	Known RBP	4.55	□□□□□ -1.68
GCD1	YOR260W	GRC3	Q07845	632 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	YLR040C	Q07988	224 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	DBP10	Q12389	995 aa	Known RBP	4.55	□□□□□ -1.68
GCD1	YOR260W	SWR1	Q05471	1514 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	DPB3	P27344	201 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	ECM32	P32644	1121 aa	Known RBP	4.55	□□□□□ -1.68
GCD1	YOR260W	SPC29	P33419	253 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	TFC3	P34111	1160 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	CRP1	P38845	465 aa	Known RBP	4.55	□□□□□ -1.68
GCD1	YOR260W	TIM11	P81449	96 aa	Predicted RBP	4.55	□□□□□ -1.68
GCD1	YOR260W	SLX4	Q12098	748 aa		4.55	□□□□□ -1.68
GCD1	YOR260W	RPS9A	O13516	197 aa	Known RBP	4.54	□□□□□ -1.68
GCD1	YOR260W	TUB3	P09734	445 aa	Known RBP	4.54	□□□□□ -1.68
GCD1	YOR260W	HOM3	P10869	527 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	RAD53	P22216	821 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	PEA2	P40091	420 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	TAD1	P53065	400 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	ERG5	P54781	538 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	PEX19	Q07418	342 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	CEX1	Q12453	761 aa		4.54	□□□□□ -1.68
GCD1	YOR260W	MEF1	P25039	761 aa		4.53	□□□□□ -1.68
GCD1	YOR260W	PER1	P25625	357 aa		4.53	□□□□□ -1.68
GCD1	YOR260W	ANP1	P32629	500 aa		4.53	□□□□□ -1.68
GCD1	YOR260W	KTR4	P38131	464 aa		4.53	□□□□□ -1.68
GCD1	YOR260W	YHR218W	P38899	603 aa		4.53	□□□□□ -1.68
GCD1	YOR260W	YNR029C	P53729	429 aa	Known RBP	4.53	□□□□□ -1.68
GCD1	YOR260W	SXM1	Q04175	944 aa	Known RBP	4.53	□□□□□ -1.68
GCD1	YOR260W	VIP1	Q06685	1146 aa	Known RBP	4.53	□□□□□ -1.68
GCD1	YOR260W	RIX7	Q07844	837 aa	Known RBP	4.53	□□□□□ -1.68
GCD1	YOR260W	MET7	Q08645	548 aa		4.53	□□□□□ -1.68
GCD1	YOR260W	APL5	Q08951	932 aa	Known RBP	4.53	□□□□□ -1.68
GCD1	YOR260W	REV3	P14284	1504 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	ERG4	P25340	473 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	CYS3	P31373	394 aa	Known RBP	4.52	□□□□□ -1.69
GCD1	YOR260W	THI4	P32318	326 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	MTC2	P34246	357 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	APE4	P38821	490 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	BNA1	P47096	177 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	YJR120W	P47157	116 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	NIT3	P49954	291 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	HOL1	P53389	586 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	VMS1	Q04311	632 aa	Known RBP	4.52	□□□□□ -1.69
GCD1	YOR260W	VTI1	Q04338	217 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	UTP14	Q04500	899 aa	Known RBP	4.52	□□□□□ -1.69
GCD1	YOR260W	YOL073C	Q08232	322 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	YLR125W	Q12138	136 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	HAL9	Q12180	1030 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	SWM1	Q12379	170 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	TPM1	P17536	199 aa	Known RBP	4.52	□□□□□ -1.69
GCD1	YOR260W	CTF13	P35203	478 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	SUL1	P38359	859 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	YHR078W	P38799	552 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	PUS2	P53167	370 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	RSC1	P53236	928 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	DAM1	P53267	343 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	NOG2	P53742	486 aa	Known RBP	4.52	□□□□□ -1.69
GCD1	YOR260W	TGL2	P54857	326 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	ATP25	Q03153	612 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	YOR022C	Q12204	715 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	TRM11	Q12463	433 aa		4.52	□□□□□ -1.69
GCD1	YOR260W	HIR1	P32479	840 aa		4.51	□□□□□ -1.69
GCD1	YOR260W	OAR1	P35731	278 aa		4.51	□□□□□ -1.69
GCD1	YOR260W	MOH1	P38191	138 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms