RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W HAL9Q12180 1030 aa6.5□□□□□ -1.37
RRP40YOL142W YOR022CQ12204 715 aa6.5□□□□□ -1.37
RRP40YOL142W LAS17Q12446 633 aa6.5□□□□□ -1.37
RRP40YOL142W PFK1P16861 987 aaKnown RBP6.49□□□□□ -1.37
RRP40YOL142W CAD1P24813 409 aaKnown RBP6.49□□□□□ -1.37
RRP40YOL142W SEC21P32074 935 aaKnown RBP6.49□□□□□ -1.37
RRP40YOL142W DNF3Q12674 1656 aa6.49□□□□□ -1.37
RRP40YOL142W PRC1P00729 532 aa6.48□□□□□ -1.37
RRP40YOL142W YHR078WP38799 552 aa6.48□□□□□ -1.37
RRP40YOL142W PER1P25625 357 aa6.47□□□□□ -1.37
RRP40YOL142W THI4P32318 326 aa6.47□□□□□ -1.37
RRP40YOL142W TRM2P33753 639 aa6.47□□□□□ -1.37
RRP40YOL142W SAP190P36123 1033 aa6.47□□□□□ -1.37
RRP40YOL142W ORC1P54784 914 aaPredicted RBP6.47□□□□□ -1.37
RRP40YOL142W MDM12Q92328 271 aa6.47□□□□□ -1.37
RRP40YOL142W TUB3P09734 445 aaKnown RBP6.46□□□□□ -1.38
RRP40YOL142W SRB8P25648 1427 aa6.46□□□□□ -1.38
RRP40YOL142W SET5P38890 526 aaKnown RBP6.46□□□□□ -1.38
RRP40YOL142W HXT16P47185 567 aa6.46□□□□□ -1.38
RRP40YOL142W RSC3Q06639 885 aa6.46□□□□□ -1.38
RRP40YOL142W PEX19Q07418 342 aa6.46□□□□□ -1.38
RRP40YOL142W YBR182C-AQ8TGU6 64 aa6.46□□□□□ -1.38
RRP40YOL142W TUB2P02557 457 aaKnown RBP6.45□□□□□ -1.38
RRP40YOL142W MSH2P25847 964 aa6.45□□□□□ -1.38
RRP40YOL142W PMI40P29952 429 aaKnown RBP6.45□□□□□ -1.38
RRP40YOL142W DEF1P35732 738 aaKnown RBP6.45□□□□□ -1.38
RRP40YOL142W MSS4P38994 779 aa6.45□□□□□ -1.38
RRP40YOL142W THI21Q08975 551 aa6.45□□□□□ -1.38
RRP40YOL142W SWM1Q12379 170 aa6.45□□□□□ -1.38
RRP40YOL142W NUP188P52593 1655 aaKnown RBP6.45□□□□□ -1.38
RRP40YOL142W MTC2P34246 357 aa6.44□□□□□ -1.38
RRP40YOL142W RLP7P40693 322 aaKnown RBP6.44□□□□□ -1.38
RRP40YOL142W VMR1P38735 1592 aa6.44□□□□□ -1.38
RRP40YOL142W GCN2P15442 1659 aa6.43□□□□□ -1.38
RRP40YOL142W MEF1P25039 761 aa6.43□□□□□ -1.38
RRP40YOL142W SHR5P41912 237 aa6.43□□□□□ -1.38
RRP40YOL142W SSY5P47002 699 aa6.43□□□□□ -1.38
RRP40YOL142W BUL1P48524 976 aa6.43□□□□□ -1.38
RRP40YOL142W ZDS1P50111 915 aaKnown RBP6.43□□□□□ -1.38
RRP40YOL142W RNH70P53331 553 aa6.43□□□□□ -1.38
RRP40YOL142W GSF2Q04697 403 aaKnown RBP6.43□□□□□ -1.38
RRP40YOL142W IKI3Q06706 1349 aaKnown RBP6.43□□□□□ -1.38
RRP40YOL142W DIF1O13577 133 aa6.42□□□□□ -1.38
RRP40YOL142W CDC9P04819 755 aa6.42□□□□□ -1.38
RRP40YOL142W MET6P05694 767 aaKnown RBP6.42□□□□□ -1.38
RRP40YOL142W PRP4P20053 465 aaKnown RBP6.42□□□□□ -1.38
RRP40YOL142W HRR25P29295 494 aaKnown RBP6.42□□□□□ -1.38
RRP40YOL142W DSS1P39112 969 aa6.42□□□□□ -1.38
RRP40YOL142W VHR1P40522 640 aa6.42□□□□□ -1.38
RRP40YOL142W ALY2P47029 1046 aa6.42□□□□□ -1.38
RRP40YOL142W ASI2P53895 289 aa6.42□□□□□ -1.38
RRP40YOL142W POB3Q04636 552 aaKnown RBP6.42□□□□□ -1.38
RRP40YOL142W AIM39Q08223 395 aa6.42□□□□□ -1.38
RRP40YOL142W GSY1P23337 708 aa6.41□□□□□ -1.38
RRP40YOL142W VBA3P25594 458 aa6.41□□□□□ -1.38
RRP40YOL142W CTF13P35203 478 aa6.41□□□□□ -1.38
RRP40YOL142W MCD4P36051 919 aa6.41□□□□□ -1.38
RRP40YOL142W SUN4P53616 420 aa6.41□□□□□ -1.38
RRP40YOL142W ERG5P54781 538 aa6.41□□□□□ -1.38
RRP40YOL142W UGO1Q03327 502 aa6.41□□□□□ -1.38
RRP40YOL142W PUS9Q12069 462 aa6.41□□□□□ -1.38
RRP40YOL142W TRM11Q12463 433 aa6.41□□□□□ -1.38
RRP40YOL142W BNR1P40450 1375 aa6.41□□□□□ -1.38
RRP40YOL142W TRP4P07285 380 aaPredicted RBP6.4□□□□□ -1.38
RRP40YOL142W PPG1P32838 368 aa6.4□□□□□ -1.38
RRP40YOL142W PEX6P33760 1030 aa6.4□□□□□ -1.38
RRP40YOL142W STO1P34160 861 aaKnown RBP6.4□□□□□ -1.38
RRP40YOL142W RRP14P36080 434 aaKnown RBP6.4□□□□□ -1.38
RRP40YOL142W SAK1P38990 1142 aa6.4□□□□□ -1.38
RRP40YOL142W PZF1P39933 429 aa6.4□□□□□ -1.38
RRP40YOL142W AIM21P40563 679 aa6.4□□□□□ -1.38
RRP40YOL142W MSE1P48525 536 aa6.4□□□□□ -1.38
RRP40YOL142W ZIP2P53061 704 aa6.4□□□□□ -1.38
RRP40YOL142W ALG12P53730 551 aa6.4□□□□□ -1.38
RRP40YOL142W KIN4Q01919 800 aa6.4□□□□□ -1.38
RRP40YOL142W MUS81Q04149 632 aaPredicted RBP6.4□□□□□ -1.38
RRP40YOL142W YDR338CQ05497 695 aa6.4□□□□□ -1.38
RRP40YOL142W EFT1P32324 842 aaKnown RBP6.39□□□□□ -1.39
RRP40YOL142W PKH1Q03407 766 aa6.39□□□□□ -1.39
RRP40YOL142W URN1Q06525 465 aaKnown RBP6.39□□□□□ -1.39
RRP40YOL142W NTG2Q08214 380 aa6.39□□□□□ -1.39
RRP40YOL142W USO1P25386 1790 aa6.39□□□□□ -1.39
RRP40YOL142W RPP1P38786 293 aa6.38□□□□□ -1.39
RRP40YOL142W PFA3P42836 336 aa6.38□□□□□ -1.39
RRP40YOL142W CAF16P43569 289 aa6.38□□□□□ -1.39
RRP40YOL142W CRR1Q05790 422 aa6.38□□□□□ -1.39
RRP40YOL142W SSM4P40318 1319 aa6.38□□□□□ -1.39
RRP40YOL142W IML1P47170 1584 aa6.37□□□□□ -1.39
RRP40YOL142W PDR5P33302 1511 aaKnown RBP6.37□□□□□ -1.39
RRP40YOL142W MRPS35P53292 345 aa6.37□□□□□ -1.39
RRP40YOL142W SNP1Q00916 300 aaPredicted RBP6.37□□□□□ -1.39
RRP40YOL142W SRD1P09007 221 aa6.36□□□□□ -1.39
RRP40YOL142W ASM4Q05166 528 aa6.36□□□□□ -1.39
RRP40YOL142W YLR040CQ07988 224 aa6.36□□□□□ -1.39
RRP40YOL142W GPR1Q12361 961 aa6.36□□□□□ -1.39
RRP40YOL142W HAP1P0CE41 1502 aa6.35□□□□□ -1.39
RRP40YOL142W YLR415CO13578 112 aa6.35□□□□□ -1.39
RRP40YOL142W ERG4P25340 473 aa6.35□□□□□ -1.39
RRP40YOL142W NGG1P32494 702 aa6.35□□□□□ -1.39
RRP40YOL142W KTR4P38131 464 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms