RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	HSP82	P02829	709 aa	Known RBP	4.67	□□□□□ -1.66
TRF5	YNL299W	PGI1	P12709	554 aa	Known RBP	4.67	□□□□□ -1.66
TRF5	YNL299W	DPB3	P27344	201 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	PEP3	P27801	918 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	MLS1	P30952	554 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	RRP1	P35178	278 aa	Predicted RBP	4.67	□□□□□ -1.66
TRF5	YNL299W	PXL1	P36166	706 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	ALG3	P38179	458 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	CCT4	P39078	528 aa	Known RBP	4.67	□□□□□ -1.66
TRF5	YNL299W	NDC80	P40460	691 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	YNL193W	P53870	558 aa		4.67	□□□□□ -1.66
TRF5	YNL299W	FPS1	P23900	669 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	GRX7	P38068	203 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	YBR284W	P38150	797 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	PMC1	P38929	1173 aa	Predicted RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
TRF5	YNL299W	HNT2	P49775	206 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	GPG1	P53130	126 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	RPT4	P53549	437 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	CAF120	P53836	1060 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	SFH1	Q06168	426 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	YPL225W	Q08971	146 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	PIF1	P07271	859 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	RPO26	P20435	155 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	RET1	P22276	1149 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	ECM32	P32644	1121 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	MUD2	P36084	527 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	SEC26	P41810	973 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	SPO74	P45819	413 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	RPS0B	P46654	252 aa	Known RBP	4.66	□□□□□ -1.66
TRF5	YNL299W	YGR237C	P50089	785 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	YNR063W	P53749	607 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	ALF1	P53904	254 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	UBX2	Q04228	584 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	VPS38	Q05919	439 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	ATG23	Q06671	453 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	GRX6	Q12438	231 aa		4.66	□□□□□ -1.66
TRF5	YNL299W	LCB1	P25045	558 aa	Known RBP	4.65	□□□□□ -1.67
TRF5	YNL299W	SEC65	P29478	273 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	CEM1	P39525	442 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	GEM1	P39722	662 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	UBP6	P43593	499 aa	Known RBP	4.65	□□□□□ -1.67
TRF5	YNL299W	YJR120W	P47157	116 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	HLJ1	P48353	224 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	LYS5	P50113	272 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	PEX8	P53248	589 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	MAL13	P53338	473 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	BOP3	P53958	396 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	PRP3	Q03338	469 aa	Predicted RBP	4.65	□□□□□ -1.67
TRF5	YNL299W	HCR1	Q05775	265 aa	Known RBP	4.65	□□□□□ -1.67
TRF5	YNL299W	OMS1	Q06668	471 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	SYT1	Q06836	1226 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	AFT2	Q08957	416 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	GNT1	Q12096	491 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	ATG9	Q12142	997 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	TMA17	Q12513	150 aa		4.65	□□□□□ -1.67
TRF5	YNL299W	TOM70	P07213	617 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	MSD1	P15179	658 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	HCA4	P20448	770 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	OPI1	P21957	404 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	SAC6	P32599	642 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	SAP190	P36123	1033 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	ADE17	P38009	592 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	YMR147W	P40218	223 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	LEM3	P42838	414 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	GCV1	P48015	400 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	SOK2	P53438	785 aa	Predicted RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	ADE12	P80210	433 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	IRC4	Q03036	179 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	THI73	Q07904	523 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	YDL176W	Q12027	708 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	RRI2	Q12348	645 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	LAM4	P38800	1345 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	GAR1	P28007	205 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	YEL043W	P32618	956 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	SEC6	P32844	805 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	SWH1	P35845	1188 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	PET10	P36139	283 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	OSH3	P38713	996 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	PNT1	P38969	423 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	SIT1	P39980	628 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	PMT3	P47190	753 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	BUL2	Q03758	920 aa	Known RBP	4.64	□□□□□ -1.67
TRF5	YNL299W	SPO71	Q03868	1245 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	YOR223W	Q12015	292 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	DCS2	Q12123	353 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	PTC5	Q12511	572 aa		4.64	□□□□□ -1.67
TRF5	YNL299W	RPS9B	P05755	195 aa	Known RBP	4.63	□□□□□ -1.67
TRF5	YNL299W	DAL7	P21826	554 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	DBP2	P24783	546 aa	Known RBP	4.63	□□□□□ -1.67
TRF5	YNL299W	ICL1	P28240	557 aa	Predicted RBP	4.63	□□□□□ -1.67
TRF5	YNL299W	URA1	P28272	314 aa	Predicted RBP	4.63	□□□□□ -1.67
TRF5	YNL299W	CDC11	P32458	415 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	YKU70	P32807	602 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	YET1	P35723	206 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	SMF1	P38925	575 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	BUD16	P39988	312 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	MIC19	P43594	170 aa		4.63	□□□□□ -1.67
TRF5	YNL299W	GFD1	Q04839	188 aa	Known RBP	4.63	□□□□□ -1.67
TRF5	YNL299W	YPR071W	Q12346	211 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms