RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YHM2Q04013 314 aa5.66□□□□□ -1.5
CUS1YMR240C SLX4Q12098 748 aa5.66□□□□□ -1.5
CUS1YMR240C SWM1Q12379 170 aa5.66□□□□□ -1.5
CUS1YMR240C ATP4P05626 244 aa5.65□□□□□ -1.51
CUS1YMR240C TUB3P09734 445 aaKnown RBP5.65□□□□□ -1.51
CUS1YMR240C SEC21P32074 935 aaKnown RBP5.65□□□□□ -1.51
CUS1YMR240C DAL3P32459 195 aa5.65□□□□□ -1.51
CUS1YMR240C NGG1P32494 702 aa5.65□□□□□ -1.51
CUS1YMR240C SEC6P32844 805 aa5.65□□□□□ -1.51
CUS1YMR240C BIT2P38346 545 aa5.65□□□□□ -1.51
CUS1YMR240C BEM4P39011 633 aa5.65□□□□□ -1.51
CUS1YMR240C PEA2P40091 420 aa5.65□□□□□ -1.51
CUS1YMR240C VHR1P40522 640 aa5.65□□□□□ -1.51
CUS1YMR240C PFA3P42836 336 aa5.65□□□□□ -1.51
CUS1YMR240C BRE5P53741 515 aaKnown RBP5.65□□□□□ -1.51
CUS1YMR240C GPD1Q00055 391 aaKnown RBP5.65□□□□□ -1.51
CUS1YMR240C YAP6Q03935 383 aa5.65□□□□□ -1.51
CUS1YMR240C NPC2Q12408 173 aa5.65□□□□□ -1.51
CUS1YMR240C RPS21BQ3E754 87 aaKnown RBP5.65□□□□□ -1.51
CUS1YMR240C RPS21AP0C0V8 87 aaKnown RBP5.64□□□□□ -1.51
CUS1YMR240C HEM12P32347 362 aaPredicted RBP5.64□□□□□ -1.51
CUS1YMR240C TSA1P34760 196 aaKnown RBP5.64□□□□□ -1.51
CUS1YMR240C EMP65P40085 556 aa5.64□□□□□ -1.51
CUS1YMR240C SPT20P50875 604 aa5.64□□□□□ -1.51
CUS1YMR240C ASM4Q05166 528 aa5.64□□□□□ -1.51
CUS1YMR240C YOR378WQ08902 515 aa5.64□□□□□ -1.51
CUS1YMR240C YLR415CO13578 112 aa5.63□□□□□ -1.51
CUS1YMR240C SOD2P00447 233 aa5.63□□□□□ -1.51
CUS1YMR240C TOP1P04786 769 aa5.63□□□□□ -1.51
CUS1YMR240C RPS13P05756 151 aaKnown RBP5.63□□□□□ -1.51
CUS1YMR240C SWI6P09959 803 aa5.63□□□□□ -1.51
CUS1YMR240C PRP4P20053 465 aaKnown RBP5.63□□□□□ -1.51
CUS1YMR240C SEC65P29478 273 aa5.63□□□□□ -1.51
CUS1YMR240C YKR075CP36155 307 aa5.63□□□□□ -1.51
CUS1YMR240C AKL1P38080 1108 aaKnown RBP5.63□□□□□ -1.51
CUS1YMR240C MSS4P38994 779 aa5.63□□□□□ -1.51
CUS1YMR240C SLD3P53135 668 aa5.63□□□□□ -1.51
CUS1YMR240C YNL034WP53963 612 aa5.63□□□□□ -1.51
CUS1YMR240C YNL018CP53976 612 aa5.63□□□□□ -1.51
CUS1YMR240C PKH1Q03407 766 aa5.63□□□□□ -1.51
CUS1YMR240C YLR224WQ05947 369 aa5.63□□□□□ -1.51
CUS1YMR240C YPR027CQ12079 277 aa5.63□□□□□ -1.51
CUS1YMR240C KCS1Q12494 1050 aa5.63□□□□□ -1.51
CUS1YMR240C KAR1P11927 433 aa5.62□□□□□ -1.51
CUS1YMR240C MAC1P35192 417 aa5.62□□□□□ -1.51
CUS1YMR240C APN2P38207 520 aa5.62□□□□□ -1.51
CUS1YMR240C PLB1P39105 664 aa5.62□□□□□ -1.51
CUS1YMR240C NUG1P40010 520 aaKnown RBP5.62□□□□□ -1.51
CUS1YMR240C GID8P40208 455 aa5.62□□□□□ -1.51
CUS1YMR240C SET2P46995 733 aaKnown RBP5.62□□□□□ -1.51
CUS1YMR240C SPC105P53148 917 aa5.62□□□□□ -1.51
CUS1YMR240C YBP2P53169 641 aa5.62□□□□□ -1.51
CUS1YMR240C RIM8P53179 542 aa5.62□□□□□ -1.51
CUS1YMR240C SLU7Q02775 382 aaKnown RBP5.62□□□□□ -1.51
CUS1YMR240C LEE1Q02799 301 aaKnown RBP5.62□□□□□ -1.51
CUS1YMR240C PEX19Q07418 342 aa5.62□□□□□ -1.51
CUS1YMR240C SST2P11972 698 aaKnown RBP5.61□□□□□ -1.51
CUS1YMR240C COX11P19516 300 aaKnown RBP5.61□□□□□ -1.51
CUS1YMR240C SEG2P34250 1132 aa5.61□□□□□ -1.51
CUS1YMR240C FAT1P38225 669 aa5.61□□□□□ -1.51
CUS1YMR240C YBR259WP38338 688 aa5.61□□□□□ -1.51
CUS1YMR240C SIC1P38634 284 aa5.61□□□□□ -1.51
CUS1YMR240C DAS1P47005 663 aa5.61□□□□□ -1.51
CUS1YMR240C PHM6Q05637 104 aa5.61□□□□□ -1.51
CUS1YMR240C CDA2Q06703 312 aa5.61□□□□□ -1.51
CUS1YMR240C TRM11Q12463 433 aa5.61□□□□□ -1.51
CUS1YMR240C MPD2Q99316 277 aa5.61□□□□□ -1.51
CUS1YMR240C HIR1P32479 840 aa5.6□□□□□ -1.51
CUS1YMR240C YHR202WP38887 602 aa5.6□□□□□ -1.51
CUS1YMR240C ECM1P39715 212 aa5.6□□□□□ -1.51
CUS1YMR240C PRP31P49704 494 aaPredicted RBP5.6□□□□□ -1.51
CUS1YMR240C RNR4P49723 345 aaKnown RBP5.6□□□□□ -1.51
CUS1YMR240C PEX15Q08215 383 aa5.6□□□□□ -1.51
CUS1YMR240C GAS1P22146 559 aaKnown RBP5.59□□□□□ -1.51
CUS1YMR240C KAR4P25583 335 aa5.59□□□□□ -1.51
CUS1YMR240C SER1P33330 395 aaKnown RBP5.59□□□□□ -1.51
CUS1YMR240C CTF13P35203 478 aa5.59□□□□□ -1.51
CUS1YMR240C TRZ1P36159 838 aaPredicted RBP5.59□□□□□ -1.51
CUS1YMR240C AIM3P38266 947 aaKnown RBP5.59□□□□□ -1.51
CUS1YMR240C ARG5,6Q01217 863 aa5.59□□□□□ -1.51
CUS1YMR240C YLR407WQ06070 228 aa5.59□□□□□ -1.51
CUS1YMR240C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
CUS1YMR240C ADE2P21264 571 aaKnown RBP5.58□□□□□ -1.52
CUS1YMR240C NIC96P34077 839 aa5.58□□□□□ -1.52
CUS1YMR240C APL2P36000 726 aaPredicted RBP5.58□□□□□ -1.52
CUS1YMR240C EXG2P52911 562 aa5.58□□□□□ -1.52
CUS1YMR240C PRP43P53131 767 aaKnown RBP5.58□□□□□ -1.52
CUS1YMR240C NOP15P53927 220 aaPredicted RBP5.58□□□□□ -1.52
CUS1YMR240C YMR210WQ03649 449 aa5.58□□□□□ -1.52
CUS1YMR240C MCM21Q06675 368 aa5.58□□□□□ -1.52
CUS1YMR240C ENB1Q08299 606 aa5.58□□□□□ -1.52
CUS1YMR240C NYV1Q12255 253 aa5.58□□□□□ -1.52
CUS1YMR240C PRP6P19735 899 aaPredicted RBP5.57□□□□□ -1.52
CUS1YMR240C YKU70P32807 602 aa5.57□□□□□ -1.52
CUS1YMR240C RPP1P38786 293 aa5.57□□□□□ -1.52
CUS1YMR240C MET14Q02196 202 aa5.57□□□□□ -1.52
CUS1YMR240C REC102Q02721 264 aa5.57□□□□□ -1.52
CUS1YMR240C NRG1Q03125 231 aa5.57□□□□□ -1.52
CUS1YMR240C HCA4P20448 770 aaKnown RBP5.56□□□□□ -1.52
CUS1YMR240C PRE10P21242 288 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 110.2 ms